←Back to structures
OM837731.1__UOL47401.1__vBVpPvVp04M_00007__00007
Bact-VirOM837731.1__UOL47401.1__vBVpPvVp04M_00007__00007
Identity
- Accession:
- OM837731 ↗
- Kingdom:
- phage
Quality
92.0
mean pLDDT
Cluster
View cluster (11 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 5-75
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1pbyA02 | 2.40.128.120 | Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 | 0.59 | 36.0 | 3.17e-01 | 100.0% | 40.6% |
| 3htyA00 | 2.40.128.280 | Mainly Beta › Beta Barrel › Lipocalin › | 0.59 | 37.0 | 3.40e-01 | 100.0% | 46.8% |
| 2fwvA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.59 | 38.0 | 2.80e-01 | 100.0% | 25.3% |
| 2z13A00 | 2.30.29.170 | Mainly Beta › Roll › PH-domain like › | 0.57 | 38.0 | 3.29e-01 | 100.0% | 42.7% |
| 2k75A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 39.0 | 3.49e-01 | 100.0% | 51.5% |
| 1cx8A01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.55 | 45.0 | 3.06e-01 | 97.2% | 59.0% |
| 1wi1A01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 33.0 | 2.94e-01 | 77.5% | 38.7% |
| 2qyuA03 | 3.40.1850.10 | Alpha Beta › 3-Layer(aba) Sandwich › HECT-like ubiquitin ligase fold › HECT-like ubiquitin ligase | 0.53 | 39.0 | 3.89e-01 | 97.2% | 74.7% |
| 3ml4C01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 36.0 | 3.28e-01 | 100.0% | 48.1% |
| 2i9yA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.53 | 36.0 | 2.85e-01 | 100.0% | 31.8% |
| 2qqzA01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.53 | 32.0 | 2.73e-01 | 98.6% | 36.5% |
| 3dmgA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 38.0 | 2.90e-01 | 80.3% | 51.0% |
| 4p2iA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.53 | 43.0 | 3.79e-01 | 97.2% | 92.3% |
| 4gzvA00 | 2.40.128.490 | Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF14869 family, DUF4488 | 0.52 | 36.0 | 2.98e-01 | 100.0% | 37.4% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3784412 | 5.1.4.44 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1_2 | 0.64 | 45.0 | 2.75e-01 | 74.6% | 47.9% |
| 3693076 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.60 | 52.0 | 4.15e-01 | 100.0% | 71.3% |
| 3627678 | 708.1.1.16 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC | 0.59 | 44.0 | 3.76e-01 | 100.0% | 48.3% |
| 4941925 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 43.0 | 4.54e-01 | 100.0% | 89.1% |
| 3991018 | 708.1.1.16 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC | 0.58 | 44.0 | 4.27e-01 | 100.0% | 72.5% |
| 3342267 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.57 | 37.0 | 2.86e-01 | 100.0% | 26.7% |
| 4025547 | 330.1.1.2 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Ribosomal_S5 | 0.56 | 39.0 | 3.86e-01 | 73.2% | 84.0% |
| 3228778 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.56 | 43.0 | 3.97e-01 | 100.0% | 65.6% |
| 3273105 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.55 | 38.0 | 3.31e-01 | 100.0% | 47.6% |
| 3313814 | 331.3.1.5 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc | 0.55 | 35.0 | 2.68e-01 | 100.0% | 25.7% |
| 3995563 | 375.1.1.89 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-LITAF-like | 0.55 | 33.0 | 3.83e-01 | 100.0% | 86.0% |
| 4023930 | 330.1.1.2 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Ribosomal_S5 | 0.54 | 37.0 | 3.62e-01 | 73.2% | 78.8% |
| 4785124 | 3274.1.1.1 ↗ | extended segments › N-terminal region in 40S ribosomal protein rpS2 (S5p) › N-terminal region in 40S ribosomal protein rpS2 (S5p) › N-terminal region in 40S ribosomal protein rpS2 (S5p) › Ribosomal_S5 | 0.53 | 38.0 | 3.93e-01 | 76.1% | 97.1% |
| 3719807 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.53 | 44.0 | 3.63e-01 | 97.2% | 92.9% |
| 4003790 | 330.1.1.2 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Ribosomal_S5 | 0.52 | 37.0 | 3.29e-01 | 74.6% | 62.9% |
| 3889863 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.52 | 42.0 | 3.70e-01 | 97.2% | 95.0% |
| 4622062 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 35.0 | 2.50e-01 | 100.0% | 21.7% |
| 3989353 | 9.9.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Hypothetical protein YwiB › Hypothetical protein YwiB › DUF1934 | 0.52 | 34.0 | 2.95e-01 | 100.0% | 39.2% |
| 4158735 | 1.1.3.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MraZ | 0.52 | 44.0 | 3.63e-01 | 98.6% | 75.7% |
| 4079870 | 4246.1.1.2 ↗ | a+b complex topology › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_1 | 0.52 | 41.0 | 2.76e-01 | 95.8% | 81.4% |
| 3798455 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.50 | 36.0 | 3.13e-01 | 85.9% | 49.1% |
D2
medium
residues 86-144
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3fhnA01 | 6.10.280.210 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dsl1p vesicle tethering complex, Tip20p subunit, domain A | 0.71 | 55.0 | 3.87e-01 | 84.7% | 44.6% |
| 2wdoA00 | 3.90.470.20 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain | 0.55 | 41.0 | 3.23e-01 | 79.7% | 63.4% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3531095 | 5050.1.1.10 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_2 | 0.68 | 58.0 | 3.82e-01 | 96.6% | 27.6% |
| 3655694 | 4992.1.1.0 ↗ | extended segments › RelB-like › RelB-like › RelB-like | 0.67 | 58.0 | 5.17e-01 | 100.0% | 67.1% |