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OM837731.1__UOL47447.1__vBVpPvVp04M_00059__00058

Bact-Vir

OM837731.1__UOL47447.1__vBVpPvVp04M_00059__00058

Identity

Accession:
OM837731 ↗
Kingdom:
phage

Quality

86.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vibrio_phage_vB_Vp_PvVp04_M

TaxID: 2928754

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 26-86_161-210
PDB
Domain cluster: rep: IMGVR_UViG_3300030641_000079-3300030641-Ga0307898_1012835__D2-127
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00145.24 best DNA_methylase 49.0 8.40e-13 97.3% 26.9%
D2 high residues 95-159
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3mmhA00 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.51 38.0 2.92e-01 81.5% 75.4%
2dgyA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.50 34.0 3.25e-01 90.8% 59.5%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3273181 60.1.2.2 ↗ beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku,Ku_C 0.58 37.0 2.43e-01 96.9% 15.9%
3480227 219.1.1.13 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.56 40.0 2.82e-01 96.9% 23.9%
3882269 220.1.1.25 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › CARM1 0.54 40.0 3.38e-01 100.0% 48.6%
4040345 7579.1.1.6 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 0.53 40.0 2.65e-01 84.6% 87.8%
3492018 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 38.0 3.26e-01 96.9% 48.6%