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OM868075.1__UPT53014.1__X__00077
Bact-VirOM868075.1__UPT53014.1__X__00077
Identity
- Accession:
- OM868075 ↗
- Kingdom:
- phage
Quality
88.5
mean pLDDT
Taxonomy
TaxID: 2928840
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-89
Domain cluster:
representative
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4errB00 | 1.20.58.1190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.75 | 48.0 | 4.99e-01 | 89.8% | 69.9% |
| 7odyC01 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.74 | 43.0 | 4.30e-01 | 89.8% | 55.4% |
| 2js5A00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.73 | 54.0 | 5.95e-01 | 88.6% | 94.4% |
| 5af7B03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.73 | 53.0 | 4.48e-01 | 77.3% | 62.8% |
| 4xvxA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.71 | 53.0 | 4.46e-01 | 78.4% | 59.9% |
| 2kw6A00 | 6.10.140.1300 | Special › Helix non-globular › Helix Hairpins › | 0.70 | 43.0 | 4.89e-01 | 85.2% | 83.1% |
| 2odmA00 | 1.10.287.750 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › SO2669-like | 0.70 | 48.0 | 5.03e-01 | 77.3% | 78.5% |
| 4djhA01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.68 | 49.0 | 3.42e-01 | 75.0% | 88.5% |
| 2a3qA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.68 | 50.0 | 4.60e-01 | 89.8% | 60.2% |
| 2yf4F00 | 1.10.3420.10 | Mainly Alpha › Orthogonal Bundle › putative ntp pyrophosphohydrolase like fold › putative ntp pyrophosphohydrolase like domain | 0.66 | 57.0 | 4.80e-01 | 93.2% | 72.7% |
| 4ri6A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.66 | 50.0 | 4.52e-01 | 80.7% | 91.6% |
| 2yx8A00 | 1.10.150.510 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Receptor activity modifying family | 0.65 | 47.0 | 4.93e-01 | 81.8% | 82.7% |
| 6d5xA00 | 1.20.1200.10 | Mainly Alpha › Up-down Bundle › Hypothetical Protein Ta1238; Chain: A; › Cobalamin adenosyltransferase-like | 0.65 | 45.0 | 3.81e-01 | 72.7% | 83.4% |
| 1m5iA00 | 1.10.287.450 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.64 | 44.0 | 4.16e-01 | 89.8% | 59.0% |
| 1orjD00 | 1.20.120.340 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS | 0.64 | 52.0 | 4.65e-01 | 88.6% | 92.8% |
| 3nrxA00 | 1.20.58.1520 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 51.0 | 4.58e-01 | 86.4% | 63.4% |
| 5fhiA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.63 | 48.0 | 4.14e-01 | 80.7% | 79.1% |
| 1wa8A00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.63 | 49.0 | 4.73e-01 | 83.0% | 74.7% |
| 3sfvB02 | 6.10.140.2010 | Special › Helix non-globular › Helix Hairpins › | 0.63 | 43.0 | 3.39e-01 | 72.7% | 76.5% |
| 1y6xA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.63 | 41.0 | 4.12e-01 | 88.6% | 65.5% |
| 1z0pA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.63 | 44.0 | 4.76e-01 | 86.4% | 89.0% |
| 1v9vA01 | 1.20.1480.20 | Mainly Alpha › Up-down Bundle › hypothetical protein mp506/mpn330, domain 1 › MAST3 pre-PK domain-like | 0.62 | 42.0 | 4.12e-01 | 77.3% | 64.2% |
| 4kzsA02 | 6.10.140.1870 | Special › Helix non-globular › Helix Hairpins › | 0.62 | 41.0 | 4.49e-01 | 76.1% | 85.7% |
| 3pivA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.62 | 44.0 | 3.64e-01 | 81.8% | 41.7% |
| 1i6zA00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.60 | 45.0 | 3.88e-01 | 78.4% | 63.7% |
| 1hqoA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.60 | 50.0 | 4.40e-01 | 92.0% | 89.3% |
| 4agsB04 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.60 | 50.0 | 4.34e-01 | 90.9% | 78.9% |
| 3r2qA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.60 | 48.0 | 4.44e-01 | 87.5% | 86.7% |
| 2dnxA00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.59 | 48.0 | 4.21e-01 | 87.5% | 68.5% |
| 1tf5A04 | 1.10.3060.10 | Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA | 0.59 | 41.0 | 3.23e-01 | 72.7% | 85.7% |
| 1nktA04 | 1.10.3060.10 | Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA | 0.58 | 41.0 | 3.24e-01 | 72.7% | 85.3% |
| 2lpeA01 | 6.10.140.1120 | Special › Helix non-globular › Helix Hairpins › | 0.57 | 40.0 | 4.24e-01 | 81.8% | 83.3% |
| 2crqA01 | 3.30.110.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Translation initiation factor 3 (IF-3), C-terminal domain | 0.56 | 36.0 | 3.66e-01 | 100.0% | 65.1% |
| 3anwA01 | 1.20.58.1030 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 44.0 | 4.04e-01 | 85.2% | 69.0% |
| 2d2sA02 | 1.20.58.1220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Exo84p, C-terminal helical domain | 0.55 | 46.0 | 4.44e-01 | 93.2% | 91.1% |
| 2q0yA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.52 | 37.0 | 3.16e-01 | 73.9% | 58.7% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3703063 | 604.3.1.0 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain | 0.72 | 47.0 | 4.63e-01 | 88.6% | 62.1% |
| 3413114 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.71 | 47.0 | 5.35e-01 | 86.4% | 92.3% |
| 3226081 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.70 | 50.0 | 3.05e-01 | 72.7% | 13.3% |
| 3608485 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.70 | 48.0 | 4.42e-01 | 71.6% | 88.7% |
| 3576710 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.69 | 49.0 | 5.04e-01 | 75.0% | 78.8% |
| 3443502 | 109.4.1.541 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF4220 | 0.68 | 52.0 | 3.64e-01 | 80.7% | 73.9% |
| 3299464 | 159.1.2.4 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › MazG-like | 0.68 | 49.0 | 4.49e-01 | 89.8% | 59.1% |
| 3712221 | 5050.1.1.1 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr | 0.68 | 51.0 | 4.38e-01 | 81.8% | 93.1% |
| 3279601 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.66 | 49.0 | 4.02e-01 | 80.7% | 54.7% |
| 4015907 | 601.33.1.14 ↗ | alpha bundles › Four-helical up-and-down bundle › CHAD domain › CHAD domain › Erg28 | 0.66 | 45.0 | 4.67e-01 | 72.7% | 75.0% |
| 3677594 | 3291.1.1.110 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › DUF641 | 0.65 | 50.0 | 4.26e-01 | 81.8% | 52.9% |
| 4080313 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.64 | 48.0 | 4.09e-01 | 78.4% | 80.0% |
| 3460130 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.64 | 49.0 | 5.13e-01 | 86.4% | 88.7% |
| 3849547 | 4992.1.1.25 ↗ | extended segments › RelB-like › RelB-like › RelB-like › SHCBP_N | 0.64 | 45.0 | 4.41e-01 | 73.9% | 88.4% |
| 5050887 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.64 | 52.0 | 4.28e-01 | 88.6% | 68.4% |
| 4939406 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 45.0 | 3.69e-01 | 89.8% | 37.7% |
| 4277373 | 4994.1.1.1 ↗ | alpha duplicates or obligate multimers › EF2458-like › EF2458-like › EF2458-like › DUF1507 | 0.62 | 47.0 | 4.62e-01 | 78.4% | 74.2% |
| 3222941 | 5054.1.1.59 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans, Ion_trans_2 | 0.62 | 46.0 | 3.62e-01 | 87.5% | 36.8% |
| 3857880 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.61 | 52.0 | 4.36e-01 | 90.9% | 64.8% |
| 3584915 | 192.7.1.0 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm | 0.61 | 39.0 | 4.04e-01 | 90.9% | 68.2% |
| 3224980 | 604.3.1.0 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain | 0.60 | 47.0 | 4.83e-01 | 88.6% | 87.1% |
| 4182591 | 7015.1.1.0 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain | 0.59 | 46.0 | 3.98e-01 | 93.2% | 53.6% |
| 3597387 | 5071.1.1.0 ↗ | alpha bundles › cytochrome bc1 complex 11 kDa protein-like › Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) › Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 0.58 | 41.0 | 4.31e-01 | 72.7% | 86.7% |
| 5016953 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.58 | 49.0 | 4.04e-01 | 93.2% | 71.2% |
| 4300173 | 633.13.1.1 ↗ | alpha bundles › Bromodomain-like › DsbB-like › DsbB-like › DsbB | 0.58 | 48.0 | 4.09e-01 | 90.9% | 61.1% |
| 3514607 | 3226.1.1.3 ↗ | alpha complex topology › Uracil Transporter UraA › Uracil Transporter UraA › Uracil Transporter UraA › HCO3_cotransp | 0.57 | 41.0 | 2.89e-01 | 90.9% | 21.9% |
| 5050578 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.56 | 43.0 | 4.45e-01 | 86.4% | 88.7% |
| 3788179 | 109.4.1.501 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › UME | 0.56 | 40.0 | 2.86e-01 | 76.1% | 31.3% |
| 3641527 | 192.8.1.353 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › Med10 | 0.56 | 43.0 | 4.47e-01 | 83.0% | 93.8% |
| 5053661 | 2011.1.1.8 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M28 | 0.52 | 43.0 | 2.85e-01 | 89.8% | 64.9% |
| 3470544 | 604.1.1.1 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin | 0.52 | 43.0 | 4.23e-01 | 89.8% | 90.5% |
| 3958889 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 43.0 | 3.44e-01 | 89.8% | 75.3% |