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OM868080.1__UPT53239.1__X__00021

Bact-Vir

OM868080.1__UPT53239.1__X__00021

Identity

Accession:
OM868080 ↗
Kingdom:
phage

Quality

91.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Synechococcus_phage_Yong-L1-251

TaxID: 2928844

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-113
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1aw8B00 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.57 41.0 4.39e-01 89.1% 90.1%
4zgnB00 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.57 41.0 4.28e-01 87.3% 80.6%
1nunA00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.54 37.0 3.41e-01 70.0% 97.8%
5e6tA02 2.40.30.120 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses 0.52 36.0 3.86e-01 75.5% 84.0%
3w1eA03 2.40.10.410 Mainly Beta › Beta Barrel › Thrombin, subunit H › FlgT, C-terminal domain 0.50 35.0 3.81e-01 77.3% 88.8%
ECOD (14)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4151014 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.70 37.0 4.86e-01 71.8% 95.0%
4540843 4.1.1.434 ↗ beta barrels › SH3 › SH3 › SH3 › DUF2642 0.66 38.0 4.76e-01 74.5% 96.9%
5000741 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.65 38.0 4.70e-01 74.5% 96.9%
4990290 4.7.1.0 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 0.64 36.0 4.29e-01 80.9% 81.3%
5069810 1.1.8.4 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › eIF2_C 0.62 40.0 4.61e-01 86.4% 90.0%
4026678 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.62 37.0 4.50e-01 74.5% 94.3%
5057445 4.7.1.1 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.58 36.0 3.97e-01 81.8% 78.8%
4078162 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 38.0 4.48e-01 73.6% 98.6%
3735267 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.54 36.0 4.00e-01 82.7% 88.2%
1527468 4.1.1.51 ↗ beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.54 37.0 3.70e-01 74.5% 69.4%
3387378 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.53 38.0 4.28e-01 75.5% 97.6%
4317167 4.1.1.52 ↗ beta barrels › SH3 › SH3 › SH3 › ZapC_C 0.53 37.0 4.32e-01 76.4% 100.0%
3476178 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 40.0 3.96e-01 96.4% 75.0%
3214653 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 37.0 3.96e-01 75.5% 100.0%
D2 high residues 115-231
PDB
Domain cluster: rep: MK511016.1__QBI81016.1__X__00029__D16-132
CATH (88)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1tvgA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.75 57.0 5.41e-01 99.1% 68.4%
2yc2A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.74 55.0 5.32e-01 99.1% 68.9%
2c9aA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.71 58.0 5.19e-01 100.0% 63.0%
4qawH03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.71 55.0 5.24e-01 100.0% 70.9%
4il7A00 2.60.120.1300 Mainly Beta › Sandwich › Jelly Rolls › 0.70 45.0 5.09e-01 96.6% 88.2%
5j7mA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.70 41.0 4.12e-01 98.3% 55.7%
2y8kA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.70 51.0 4.82e-01 99.1% 62.8%
1pm4A00 2.60.120.510 Mainly Beta › Sandwich › Jelly Rolls › Mitogen Ypm 0.69 51.0 5.15e-01 97.4% 76.9%
1j3qB00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.69 45.0 3.89e-01 99.1% 42.1%
5l73A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.69 56.0 4.92e-01 100.0% 58.6%
4qpwA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.69 53.0 4.94e-01 100.0% 66.2%
6a48A01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.69 57.0 5.27e-01 99.1% 71.2%
6a48A02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.69 57.0 5.37e-01 97.4% 73.9%
7mjrA03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.67 54.0 5.24e-01 99.1% 76.3%
4h3wA02 2.60.120.1260 Mainly Beta › Sandwich › Jelly Rolls › 0.66 59.0 5.45e-01 100.0% 82.2%
5cadA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.66 41.0 3.47e-01 98.3% 37.3%
2qfeA00 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.66 51.0 4.88e-01 100.0% 70.5%
5y4mA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.65 53.0 4.92e-01 99.1% 68.7%
3wnoA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 48.0 5.11e-01 90.6% 90.0%
4mzuF02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.65 40.0 3.72e-01 97.4% 48.0%
4l9bA02 2.60.120.1400 Mainly Beta › Sandwich › Jelly Rolls › Viral head domain of polysaccharide receptor-binding protein-like 0.65 57.0 4.76e-01 99.1% 82.6%
4o9gA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.65 39.0 3.77e-01 96.6% 50.7%
6mkbA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.65 58.0 5.22e-01 98.3% 86.9%
2orzA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.64 54.0 4.90e-01 99.1% 68.2%
1wmdA02 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.64 54.0 5.43e-01 97.4% 90.6%
2e26A02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.64 54.0 4.97e-01 99.1% 70.3%
2zewB00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.64 51.0 4.73e-01 99.1% 68.7%
1nc7A00 2.60.290.11 Mainly Beta › Sandwich › Hypothetical Protein Tm1070; Chain: A › TM1070-like 0.63 48.0 4.90e-01 98.3% 81.9%
1zvfB01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.63 38.0 3.43e-01 94.9% 42.1%
1uijB01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.63 39.0 3.46e-01 97.4% 43.0%
8a28A02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.62 56.0 5.25e-01 97.4% 88.7%
4fixA01 3.90.550.60 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › 0.62 57.0 3.88e-01 100.0% 60.3%
2oa2A01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.62 39.0 3.93e-01 97.4% 60.3%
4lr4A02 2.60.120.1430 Mainly Beta › Sandwich › Jelly Rolls › 0.62 54.0 4.82e-01 100.0% 67.3%
7lyuB02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.62 54.0 4.94e-01 97.4% 72.8%
4xuoA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.62 51.0 4.69e-01 100.0% 68.6%
3m70A01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.61 41.0 4.28e-01 96.6% 74.5%
3h7jA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.61 36.0 3.71e-01 98.3% 58.8%
2dduA03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.61 53.0 4.85e-01 99.1% 72.3%
1dyoA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.61 50.0 4.64e-01 99.1% 68.6%
2bnmA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.61 38.0 3.83e-01 97.4% 60.0%
2xskA00 2.60.40.2420 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 43.0 4.70e-01 87.2% 91.6%
2d73A03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.61 40.0 4.13e-01 82.1% 69.9%
5jtwA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 45.0 4.79e-01 90.6% 89.2%
2q3zA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 45.0 4.87e-01 90.6% 94.8%
1alyA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.60 54.0 5.00e-01 98.3% 87.0%
4msvA01 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.60 53.0 5.06e-01 97.4% 90.5%
2zxqA05 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.60 54.0 4.55e-01 100.0% 58.6%
2q7nA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 53.0 5.47e-01 98.3% 100.0%
2qjvA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.60 43.0 3.95e-01 98.3% 57.3%
4kh9A01 2.60.40.3870 Mainly Beta › Sandwich › Immunoglobulin-like › Uncharacterised protein PF16024, DUF4785 0.60 44.0 4.27e-01 89.7% 68.2%
4d0qA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.60 54.0 4.86e-01 100.0% 77.0%
5e1qA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.60 37.0 4.02e-01 79.5% 75.0%
2fqpA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.59 35.0 3.85e-01 96.6% 71.6%
1s55A00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.59 53.0 4.86e-01 100.0% 87.2%
2okxA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.59 53.0 4.70e-01 100.0% 79.2%
2vtfA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.59 53.0 4.61e-01 99.1% 72.9%
2a74D01 2.60.40.1930 Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain 0.59 43.0 4.21e-01 94.9% 69.5%
2n59A00 2.60.40.2420 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 45.0 4.78e-01 94.0% 94.1%
1cov100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.58 52.0 4.01e-01 99.1% 58.7%
7rskA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 47.0 4.88e-01 90.6% 92.7%
2wnvD00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.58 52.0 5.03e-01 98.3% 87.2%
1hgeA01 3.90.209.20 Alpha Beta › Alpha-Beta Complex › Hemagglutinin (Ha1 Chain); Chain: A; domain 1 › Haemagglutinin, alpha/beta domain, HA1 chain 0.58 46.0 3.76e-01 98.3% 45.8%
2pn5A03 2.60.40.1940 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 44.0 4.58e-01 90.6% 88.6%
1g0dA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 45.0 4.82e-01 94.9% 99.0%
3o0lA00 2.60.40.3230 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 45.0 4.63e-01 81.2% 90.8%
4kg8A00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.58 51.0 4.94e-01 98.3% 87.6%
1o91A00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.58 51.0 4.93e-01 98.3% 86.3%
5hbaA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.57 51.0 4.91e-01 98.3% 86.5%
4irzA02 2.60.40.1460 Mainly Beta › Sandwich › Immunoglobulin-like › Integrin domains. Chain A, domain 2 0.57 48.0 4.33e-01 90.6% 91.2%
1tnrA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.57 50.0 4.69e-01 97.4% 91.0%
6v46A02 3.90.209.20 Alpha Beta › Alpha-Beta Complex › Hemagglutinin (Ha1 Chain); Chain: A; domain 1 › Haemagglutinin, alpha/beta domain, HA1 chain 0.57 44.0 3.63e-01 97.4% 43.9%
2v5yA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 44.0 4.67e-01 95.7% 94.1%
3afgA03 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.57 46.0 4.91e-01 94.0% 100.0%
3fn9A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 48.0 4.85e-01 94.9% 90.8%
1bev100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.56 49.0 3.83e-01 99.1% 57.1%
3abzA03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.56 50.0 4.48e-01 99.1% 83.0%
7q61A01 2.60.40.1940 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 43.0 4.48e-01 90.6% 90.8%
2pn5A10 2.60.40.690 Mainly Beta › Sandwich › Immunoglobulin-like › Alpha-macroglobulin, receptor-binding domain 0.55 45.0 4.21e-01 99.1% 71.2%
1zldA00 2.60.40.1920 Mainly Beta › Sandwich › Immunoglobulin-like › Proteinaceous host-selective toxin ToxA 0.55 42.0 4.44e-01 80.3% 99.0%
6mvfA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.54 49.0 4.57e-01 100.0% 89.2%
4hslA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.54 34.0 3.07e-01 97.4% 42.8%
1djxA03 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.54 43.0 4.20e-01 86.3% 98.5%
2vrsA03 2.60.90.40 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › 0.54 43.0 4.17e-01 88.0% 80.3%
6qe7A01 3.90.182.10 Alpha Beta › Alpha-Beta Complex › Toxin - Anthrax Protective Antigen; domain 1 › Toxin - Anthrax Protective Antigen;domain 1 0.53 47.0 4.48e-01 100.0% 83.8%
7u7nA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 41.0 4.50e-01 94.9% 100.0%
2qsdA01 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.52 30.0 3.74e-01 72.6% 100.0%
1x9tA02 3.90.1620.10 Alpha Beta › Alpha-Beta Complex › adenovirus 2 penton base, domain 2 › adenovirus 2 penton base, domain 2 0.51 35.0 2.74e-01 71.8% 91.8%
ECOD (99)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3945527 10.32.1.239 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › FNIII-A_GpJ 0.84 78.0 7.44e-01 98.3% 89.6%
3972098 10.32.1.239 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › FNIII-A_GpJ 0.84 77.0 7.30e-01 98.3% 83.7%
3978761 10.32.1.239 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › FNIII-A_GpJ 0.83 74.0 7.28e-01 98.3% 88.8%
3707942 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.75 60.0 6.08e-01 99.1% 85.2%
5058689 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.74 57.0 6.14e-01 97.4% 95.0%
3018675 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.74 56.0 5.47e-01 97.4% 72.5%
3939502 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.74 58.0 5.93e-01 98.3% 85.2%
5039236 10.1.2.191 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › CBM60 0.72 57.0 5.36e-01 98.3% 70.0%
4934399 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.72 53.0 5.33e-01 99.1% 75.8%
3620151 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.71 59.0 6.01e-01 98.3% 89.6%
4940383 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.71 59.0 5.39e-01 99.1% 67.7%
3624575 10.32.1.72 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TPPII_GBD 0.71 56.0 5.56e-01 99.1% 81.7%
3893205 10.32.1.172 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DDR1-2_DS-like 0.70 61.0 5.13e-01 100.0% 56.4%
5040234 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.70 54.0 5.45e-01 99.1% 82.6%
3229633 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.70 54.0 5.52e-01 98.3% 83.5%
4255542 10.32.1.216 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › MAM 0.70 57.0 5.08e-01 100.0% 61.8%
3526370 10.32.1.72 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TPPII_GBD 0.70 56.0 5.57e-01 99.1% 82.5%
3260805 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.70 63.0 5.30e-01 98.3% 66.7%
3300834 10.32.1.210 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GOLD_PATL1_C 0.70 53.0 5.37e-01 99.1% 80.9%
2410193 3794.1.2.0 ↗ a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › a+b domain in pyruvate carboxylase 0.70 42.0 4.92e-01 96.6% 88.5%
4076905 10.1.1.10 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM 0.70 57.0 5.06e-01 100.0% 61.8%
5041351 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.70 53.0 5.29e-01 99.1% 78.3%
3925162 10.32.1.72 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TPPII_GBD 0.69 54.0 5.56e-01 96.6% 87.3%
3341432 10.32.1.4 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.69 52.0 4.88e-01 99.1% 64.1%
3934059 10.32.1.216 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › MAM 0.69 55.0 5.05e-01 100.0% 65.2%
3490022 10.32.1.184 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Androglobin_II 0.69 50.0 4.63e-01 99.1% 59.3%
4944602 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.69 56.0 5.13e-01 100.0% 68.0%
3889464 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.68 62.0 5.73e-01 99.1% 88.0%
1412423 10.32.1.72 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TPPII_GBD 0.68 56.0 5.44e-01 98.3% 80.3%
3979069 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.68 56.0 5.57e-01 99.1% 85.8%
4942730 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.68 48.0 5.20e-01 90.6% 88.4%
3773390 10.1.1.10 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM 0.68 54.0 4.83e-01 100.0% 59.4%
3533957 10.1.1.10 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM 0.68 55.0 5.19e-01 100.0% 71.7%
3923782 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.68 45.0 5.31e-01 82.9% 100.0%
4955347 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.67 56.0 5.89e-01 97.4% 100.0%
3883198 10.32.1.77 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Reelin_subrepeat-B 0.67 57.0 4.81e-01 99.1% 55.4%
3912175 10.1.1.10 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM 0.67 55.0 4.82e-01 100.0% 59.4%
3591997 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.67 51.0 4.97e-01 97.4% 73.1%
3242689 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.67 56.0 5.33e-01 100.0% 76.4%
4983953 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.67 60.0 5.34e-01 98.3% 70.3%
3235629 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.67 55.0 4.85e-01 100.0% 60.0%
5039612 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.66 57.0 5.77e-01 99.1% 94.1%
4426314 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.66 56.0 5.21e-01 98.3% 74.5%
3538224 10.1.1.10 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM 0.66 54.0 4.79e-01 100.0% 62.4%
3937957 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.65 55.0 4.58e-01 100.0% 53.0%
1176686 10.32.1.77 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Reelin_subrepeat-B 0.65 54.0 5.06e-01 97.4% 72.3%
3424937 10.32.1.8 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 0.65 53.0 4.68e-01 100.0% 59.4%
3881289 10.3.1.1 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF 0.65 58.0 5.24e-01 98.3% 83.0%
5041016 10.1.2.181 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › CBM_4_9 0.65 58.0 5.23e-01 100.0% 73.3%
3709391 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.64 56.0 5.50e-01 99.1% 88.8%
3609843 10.32.1.310 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EGF_Teneurin 0.64 56.0 4.95e-01 99.1% 65.9%
5000149 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 49.0 4.80e-01 88.0% 74.4%
3780635 10.32.1.184 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Androglobin_II 0.64 52.0 4.83e-01 99.1% 71.0%
337395 10.32.1.8 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 0.64 51.0 4.73e-01 99.1% 68.7%
3598842 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.63 55.0 5.08e-01 96.6% 77.3%
5068112 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 48.0 5.04e-01 92.3% 91.4%
3707025 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.62 56.0 5.09e-01 99.1% 89.0%
3898740 10.3.1.1 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF 0.62 51.0 4.86e-01 94.9% 75.4%
3404052 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.62 57.0 5.35e-01 100.0% 85.0%
1156534 10.5.1.4 ↗ beta sandwiches › jelly-roll › Viral protein domain › Viral protein domain › Hema_HEFG 0.62 50.0 4.63e-01 99.1% 68.0%
1563470 10.32.1.8 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 0.62 51.0 4.64e-01 100.0% 65.6%
4952104 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.61 55.0 4.80e-01 98.3% 87.4%
4991389 10.1.1.117 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Thermopsin 0.61 54.0 4.14e-01 97.4% 79.9%
4983416 11.1.1.103 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB 0.61 49.0 4.99e-01 91.5% 87.0%
3897855 10.3.1.1 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF 0.61 55.0 4.80e-01 99.1% 82.8%
4928398 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 47.0 4.83e-01 90.6% 85.1%
5025925 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.61 54.0 4.82e-01 100.0% 71.2%
5035714 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 49.0 4.87e-01 90.6% 84.2%
4183578 11.1.1.929 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF28202 0.60 48.0 5.09e-01 88.9% 95.2%
3509447 10.32.1.223 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GBD_ELAPOR1 0.60 54.0 4.82e-01 100.0% 84.8%
3987226 10.32.1.87 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9_1 0.59 53.0 4.74e-01 100.0% 72.4%
3797533 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 48.0 4.87e-01 92.3% 88.7%
5009959 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 48.0 4.99e-01 91.5% 92.7%
3257331 11.1.1.1040 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF28849 0.59 48.0 4.78e-01 90.6% 83.2%
5029910 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 44.0 4.33e-01 90.6% 71.5%
4970155 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 51.0 5.11e-01 94.9% 95.8%
4517189 10.3.1.1 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF 0.59 51.0 4.62e-01 96.6% 80.6%
2117419 11.1.1.14 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Glyco_hydro_2 0.58 47.0 4.85e-01 90.6% 90.3%
4926859 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 48.0 4.85e-01 91.5% 85.8%
3585676 11.1.1.593 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › INTS7_C 0.58 47.0 4.60e-01 91.5% 79.1%
3702304 11.2.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.58 47.0 4.39e-01 86.3% 89.7%
1082798 11.1.1.804 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_ANOS1 0.58 45.0 4.44e-01 90.6% 77.2%
5015217 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 45.0 4.68e-01 90.6% 89.1%
2088111 11.1.1.14 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Glyco_hydro_2 0.58 48.0 4.82e-01 90.6% 87.6%
4048590 10.32.1.53 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GalBD_like 0.58 51.0 4.54e-01 100.0% 82.3%
3810149 11.10.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like 0.58 48.0 4.54e-01 89.7% 89.3%
5038110 11.1.1.103 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB 0.57 50.0 4.96e-01 94.9% 94.2%
2117377 11.1.1.14 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Glyco_hydro_2 0.57 47.0 4.79e-01 90.6% 92.0%
3027436 11.1.1.14 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Glyco_hydro_2 0.57 47.0 4.68e-01 91.5% 87.4%
5069244 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 45.0 4.61e-01 85.5% 90.4%
4929379 11.1.1.929 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF28202 0.56 46.0 4.76e-01 93.2% 95.5%
3290473 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 49.0 4.81e-01 97.4% 90.4%
4958880 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.55 41.0 4.42e-01 88.9% 94.7%
4937355 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 47.0 4.54e-01 94.9% 96.2%
4929344 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 47.0 4.54e-01 97.4% 84.3%
3245639 11.2.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.54 42.0 4.04e-01 85.5% 99.3%
3938345 11.1.1.909 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Gpi16 0.53 42.0 4.04e-01 90.6% 72.1%
4927848 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 47.0 4.75e-01 97.4% 100.0%
3969691 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.53 38.0 3.46e-01 94.9% 54.5%
D3 high residues 269-355
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3d37A02 3.55.50.10 Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › Baseplate protein-like domains 0.73 57.0 5.75e-01 88.5% 83.5%
4griA04 1.10.8.70 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutamate-tRNA synthetase, class I, anticodon-binding domain 1 0.59 36.0 4.34e-01 83.9% 100.0%
2qbyA01 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.52 40.0 3.89e-01 100.0% 72.8%
3lfuA02 1.10.10.160 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.51 31.0 3.34e-01 77.0% 71.4%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3964700 3070.1.1.0 ↗ a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins 0.88 72.0 7.55e-01 86.2% 97.5%
184487 3070.1.1.12 ↗ a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Gp44-like_2nd 0.73 57.0 5.75e-01 88.5% 83.5%
3420048 101.1.12.6 ↗ alpha arrays › HTH › HTH › HTH motif inserted in other structures › Transposase_28 0.62 48.0 3.79e-01 95.4% 40.6%
3600183 243.9.1.0 ↗ a+b two layers › Cystatin-like › Nuclease A inhibitor (NuiA)-related › Nuclease A inhibitor (NuiA)-related 0.51 37.0 2.99e-01 77.0% 44.4%
D4 high residues 463-584
PDB
Domain cluster: rep: KJ534580.1__AHX01182.1__M316_0117__00117__D554-561_649-693_720-800
CATH (45)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4wqmA02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.71 50.0 5.54e-01 72.1% 96.9%
2awnC03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.69 31.0 4.46e-01 73.8% 91.4%
2ey4D00 2.40.10.230 Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain 0.69 42.0 5.16e-01 74.6% 100.0%
2zzeA03 2.40.30.130 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.66 43.0 4.71e-01 70.5% 80.6%
2qf4A01 2.40.10.340 Mainly Beta › Beta Barrel › Thrombin, subunit H › Rod shape-determining protein MreC, domain 1 0.65 40.0 4.74e-01 74.6% 92.4%
3u28C00 2.40.10.230 Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain 0.65 44.0 4.90e-01 77.0% 90.2%
1gutA00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.65 32.0 4.25e-01 75.4% 86.6%
3kewA01 2.40.30.130 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.65 41.0 4.78e-01 70.5% 91.7%
1i8dA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.64 45.0 5.20e-01 77.9% 100.0%
4g6iB01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.63 44.0 5.05e-01 76.2% 98.9%
2xnjA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.63 45.0 4.83e-01 74.6% 100.0%
5tr9A01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.62 45.0 4.97e-01 74.6% 99.0%
3a35A02 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.62 43.0 4.86e-01 76.2% 94.6%
4g6iC02 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.61 41.0 4.61e-01 76.2% 89.4%
2ii7H00 2.60.290.11 Mainly Beta › Sandwich › Hypothetical Protein Tm1070; Chain: A › TM1070-like 0.60 39.0 4.19e-01 72.1% 76.4%
4kx7A01 2.60.40.1730 Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain 0.59 42.0 3.51e-01 73.8% 41.1%
3d30A01 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.57 40.0 4.21e-01 72.1% 99.1%
4kbxA01 2.40.37.30 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › 0.57 48.0 3.88e-01 90.2% 93.0%
1qr4A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 36.0 4.08e-01 71.3% 89.7%
2e3vA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 38.0 4.09e-01 74.6% 82.5%
3wcyA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 34.0 3.91e-01 73.0% 86.0%
1y6kR01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 37.0 4.04e-01 71.3% 83.3%
6i6rB03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 37.0 3.98e-01 74.6% 84.8%
3op1A02 2.40.30.30 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like 0.54 44.0 4.61e-01 86.9% 100.0%
1nc7A00 2.60.290.11 Mainly Beta › Sandwich › Hypothetical Protein Tm1070; Chain: A › TM1070-like 0.53 36.0 3.72e-01 71.3% 72.4%
4eq3A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 37.0 4.02e-01 73.0% 87.8%
5e4eC02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 35.0 3.79e-01 73.8% 82.2%
2jwyA01 2.60.40.1620 Mainly Beta › Sandwich › Immunoglobulin-like › Lipoprotein YajI-like 0.53 38.0 3.76e-01 77.0% 85.9%
1bquA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 35.0 3.83e-01 72.1% 84.0%
3zssA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 37.0 3.86e-01 73.8% 88.5%
6hyfA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 35.0 3.75e-01 73.0% 79.2%
1bpvA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 36.0 3.85e-01 74.6% 83.7%
1fyhB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 35.0 3.90e-01 73.8% 87.6%
2jllA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 35.0 3.80e-01 73.0% 85.7%
1iarB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 34.0 3.77e-01 72.1% 86.5%
5zi7A04 2.60.40.1840 Mainly Beta › Sandwich › Immunoglobulin-like › Aminopeptidase N, middle-beta domain 0.51 33.0 3.70e-01 72.1% 88.5%
6se8A04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 36.0 3.85e-01 73.8% 91.7%
1f6fB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 35.0 3.81e-01 73.0% 87.6%
4rs1B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 34.0 3.69e-01 73.0% 80.6%
3og4B01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 36.0 3.91e-01 73.8% 86.4%
4dohB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 36.0 3.84e-01 73.8% 86.7%
2id4A02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.51 35.0 3.45e-01 72.1% 71.0%
4uzgA01 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 36.0 3.32e-01 73.0% 73.1%
4oumA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.50 35.0 3.49e-01 73.0% 98.5%
1n26A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 37.0 3.92e-01 78.7% 89.7%
ECOD (60)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4453032 1.1.7.7 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.73 51.0 5.55e-01 71.3% 96.0%
4444484 1.1.7.7 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.71 50.0 5.45e-01 71.3% 98.0%
4952899 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.71 45.0 5.36e-01 75.4% 97.5%
4991129 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.70 43.0 5.08e-01 76.2% 90.5%
4981284 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.68 43.0 5.02e-01 70.5% 90.6%
5010595 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.68 47.0 5.43e-01 79.5% 100.0%
5074238 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.68 42.0 5.14e-01 73.0% 100.0%
3291549 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.68 49.0 5.27e-01 74.6% 95.2%
4933363 1.1.7.20 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 0.68 41.0 5.11e-01 74.6% 100.0%
4946423 1.1.7.138 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › NAD_binding_1 0.68 48.0 5.29e-01 73.8% 94.0%
4259810 1.1.7.20 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 0.68 43.0 5.19e-01 74.6% 98.8%
4515154 2.4.1.12 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_3+CysA_C_terminal 0.67 34.0 3.56e-01 76.2% 52.2%
4423739 1.1.7.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.67 47.0 5.30e-01 79.5% 93.7%
5046975 1.1.7.21 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RIBIOP_C 0.66 42.0 5.00e-01 74.6% 97.5%
4042679 1.1.7.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.66 45.0 5.25e-01 77.0% 100.0%
3389361 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.65 46.0 5.10e-01 73.8% 93.7%
3295299 1.1.7.20 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 0.65 45.0 5.04e-01 80.3% 92.6%
3248732 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.65 46.0 4.59e-01 73.0% 98.4%
4066771 1.1.7.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.64 46.0 5.07e-01 79.5% 94.7%
4619658 1.1.7.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.64 45.0 4.95e-01 78.7% 91.6%
4322439 1.1.7.9 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c 0.64 41.0 4.28e-01 71.3% 70.0%
4381868 1.1.7.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.64 45.0 5.03e-01 77.0% 96.7%
4353877 1.1.7.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.64 46.0 5.14e-01 80.3% 95.8%
3937123 1.1.7.20 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 0.64 44.0 4.93e-01 79.5% 91.6%
3483841 1.1.7.20 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 0.64 44.0 4.76e-01 78.7% 84.5%
4493188 1.1.7.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.64 44.0 4.91e-01 79.5% 92.6%
2869319 1.1.7.20 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 0.64 43.0 4.73e-01 77.9% 86.7%
3272018 1.1.7.20 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 0.63 45.0 4.84e-01 78.7% 87.4%
5069408 1.1.7.7 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.63 44.0 5.03e-01 74.6% 98.9%
4163756 1.1.7.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.63 45.0 4.95e-01 79.5% 94.7%
2896442 1.1.7.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Lum_binding 0.63 44.0 4.99e-01 76.2% 95.7%
3976133 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.62 44.0 4.86e-01 72.1% 93.7%
4552265 1.1.7.4 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_1 0.62 46.0 4.59e-01 77.0% 88.0%
4440308 1.1.7.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.62 42.0 4.65e-01 77.9% 89.5%
4984467 1.1.7.7 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.62 43.0 4.81e-01 73.8% 93.7%
4203993 1.1.7.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.61 44.0 4.94e-01 78.7% 96.8%
4943168 1.1.7.144 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › AAA_11 0.61 44.0 4.87e-01 75.4% 96.8%
5041618 1.1.7.20 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 0.60 43.0 4.82e-01 78.7% 96.8%
5002426 1.1.7.20 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 0.60 41.0 4.78e-01 73.0% 100.0%
4071868 1.1.7.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.60 41.0 4.63e-01 77.9% 95.6%
3255732 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.60 43.0 4.78e-01 75.4% 98.9%
3558379 4081.1.1.5 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.59 42.0 3.49e-01 73.8% 40.9%
3727353 10.41.1.1 ↗ beta sandwiches › jelly-roll › Protein Hikeshi jelly-roll domain › Protein Hikeshi jelly-roll domain › Hikeshi-like_N 0.55 38.0 3.98e-01 74.6% 76.5%
3722815 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 38.0 3.95e-01 73.0% 88.7%
3878739 11.1.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.53 35.0 3.79e-01 73.0% 78.1%
3884572 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 34.0 3.96e-01 70.5% 92.9%
3885324 11.1.1.260 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG_2 0.53 37.0 3.97e-01 72.1% 87.6%
3415694 10.40.1.0 ↗ beta sandwiches › jelly-roll › PHR domain › PHR domain 0.53 37.0 3.46e-01 72.1% 63.9%
3931855 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.53 38.0 3.21e-01 75.4% 67.3%
3971620 1.1.7.88 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25963 0.53 44.0 4.18e-01 92.6% 84.0%
4939115 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.52 37.0 3.59e-01 73.8% 76.4%
4989054 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 36.0 3.99e-01 73.0% 91.6%
3583164 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 34.0 3.71e-01 73.0% 84.2%
3961825 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 36.0 3.87e-01 73.8% 93.3%
3466150 11.1.1.23 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Expansin_C 0.51 35.0 3.61e-01 70.5% 77.4%
3723009 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 36.0 3.42e-01 73.0% 86.9%
3756125 11.1.1.127 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › IL6Ra-bind 0.50 35.0 3.75e-01 76.2% 84.8%
4057741 1.1.9.5 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg 0.50 35.0 2.89e-01 71.3% 43.6%
4945485 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 34.0 3.78e-01 71.3% 90.5%
5068815 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 33.0 3.66e-01 71.3% 87.4%
D5 medium residues 360-462
PDB
Domain cluster: rep: NC_074755.1__YP_010774351.1__QJS28_gp38__00038__D369-473_584-611
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3618613 226.1.1.0 ↗ a+b two layers › POZ domain › POZ domain › POZ domain 0.58 40.0 3.39e-01 70.9% 77.1%
3211456 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.51 37.0 2.82e-01 74.8% 59.6%