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OM868081.1__UPT53287.1__X__00017
Bact-VirOM868081.1__UPT53287.1__X__00017
Identity
- Accession:
- OM868081 ↗
- Kingdom:
- phage
Quality
81.0
mean pLDDT
Taxonomy
TaxID: 2928845
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-52
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7d4rB01 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.60 | 41.0 | 2.69e-01 | 70.8% | 44.8% |
| 2f1rA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 45.0 | 3.21e-01 | 97.9% | 66.9% |
| 1uaaA04 | 1.10.486.10 | Mainly Alpha › Orthogonal Bundle › PCRA; domain 4 › PCRA; domain 4 | 0.51 | 40.0 | 2.98e-01 | 100.0% | 71.0% |
| 5tvfD00 | 3.60.90.10 | Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase | 0.51 | 39.0 | 2.52e-01 | 89.6% | 26.7% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4029389 | 5040.1.1.0 ↗ | extended segments › Cytochrome c oxidase subunit II-like, transmembrane region › Cytochrome c oxidase subunit II-like, transmembrane region › Cytochrome c oxidase subunit II-like, transmembrane region | 0.60 | 36.0 | 3.04e-01 | 77.1% | 35.0% |
| 4943135 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.60 | 33.0 | 2.23e-01 | 83.3% | 16.9% |
| 3494855 | 4970.1.1.23 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › ASC | 0.59 | 47.0 | 3.55e-01 | 100.0% | 36.5% |
| 4985671 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.58 | 47.0 | 3.01e-01 | 95.8% | 81.1% |
| 4572696 | 3512.1.1.2 ↗ | beta duplicates or obligate multimers › Trimeric autotransporter adhesin GIN domain › Trimeric autotransporter adhesin GIN domain › Trimeric autotransporter adhesin GIN domain › YadA_stalk | 0.57 | 40.0 | 3.27e-01 | 77.1% | 41.2% |
| 2526325 | 601.7.3.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN | 0.56 | 44.0 | 2.98e-01 | 87.5% | 51.3% |