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OM868081.1__UPT53301.1__X__00031

Bact-Vir

OM868081.1__UPT53301.1__X__00031

Identity

Accession:
OM868081 ↗
Kingdom:
phage

Quality

44.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Synechococcus_phage_Yong-L2-223

TaxID: 2928845

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 186-270
PDB
D2 medium residues 8-98
PDB
Domain cluster: rep: JQ312117.1__AFH19707.1__7-7-1_0009__00009__D12-80
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3kr9A02 1.10.287.1890 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.64 31.0 3.72e-01 92.3% 68.9%
2wmmA01 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.63 24.0 3.39e-01 90.1% 69.4%
2rp4A00 6.10.280.60 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Transcription factor p53, C-terminal domain 0.56 30.0 3.39e-01 94.5% 66.2%
3v9rB00 1.10.20.10 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A 0.55 31.0 3.48e-01 94.5% 70.8%
2pfdA03 1.20.120.680 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Formiminotetrahydrofolate cyclodeaminase monomer, up-and-down helical bundle 0.52 41.0 3.28e-01 87.9% 99.0%
4evxA00 1.10.1740.240 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › 0.51 36.0 3.58e-01 86.8% 69.1%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5003022 219.1.1.13 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.58 42.0 3.08e-01 76.9% 59.2%
D3 medium residues 347-389_446-482
PDB
D4 medium residues 520-547_610-649
PDB