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OM868082.1__UPT53415.1__X__00045
Bact-VirOM868082.1__UPT53415.1__X__00045
Identity
- Accession:
- OM868082 ↗
- Kingdom:
- phage
Quality
87.3
mean pLDDT
Taxonomy
TaxID: 2928846
Cluster
View cluster (7 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 20-89
Domain cluster:
rep: CU468217.1__CAO99397.1__X__00071__D35-93
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1vw4X00 | 2.20.28.120 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › Ribosomal protein L33 | 0.62 | 42.0 | 4.35e-01 | 98.6% | 76.6% |
| 2v5yA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 44.0 | 3.98e-01 | 100.0% | 54.7% |
| 1d0nA06 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.62 | 36.0 | 3.01e-01 | 91.4% | 32.3% |
| 1o22A00 | 3.90.1000.10 | Alpha Beta › Alpha-Beta Complex › Orphan Protein Tm0875; Chain: A; › Hypothetical protein TM0875 | 0.62 | 48.0 | 3.85e-01 | 87.1% | 100.0% |
| 1a0iA01 | 3.30.1490.70 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.60 | 40.0 | 3.87e-01 | 100.0% | 59.0% |
| 1va0B02 | 3.30.950.10 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain | 0.60 | 42.0 | 3.52e-01 | 100.0% | 41.9% |
| 1qysA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.59 | 40.0 | 3.74e-01 | 90.0% | 55.4% |
| 2npnA02 | 3.30.950.10 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain | 0.58 | 41.0 | 3.60e-01 | 100.0% | 48.6% |
| 2zvbA02 | 3.30.950.10 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain | 0.58 | 39.0 | 3.25e-01 | 100.0% | 38.3% |
| 1s4dE02 | 3.30.950.10 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain | 0.57 | 41.0 | 3.30e-01 | 100.0% | 38.8% |
| 2jvuA00 | 2.60.40.2290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 45.0 | 4.11e-01 | 100.0% | 64.3% |
| 1vkzA02 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.56 | 41.0 | 4.11e-01 | 100.0% | 77.1% |
| 2pjyC00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.55 | 41.0 | 3.96e-01 | 95.7% | 70.9% |
| 2hhzA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.55 | 42.0 | 3.48e-01 | 100.0% | 44.2% |
| 3h20A01 | 3.30.1490.240 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain | 0.54 | 38.0 | 3.89e-01 | 100.0% | 78.8% |
| 3m1cA04 | 2.60.40.3190 | Mainly Beta › Sandwich › Immunoglobulin-like › Herpesvirus glycoprotein H, C-terminal domain | 0.54 | 40.0 | 3.37e-01 | 100.0% | 43.9% |
| 3h41A02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.53 | 38.0 | 3.85e-01 | 98.6% | 76.5% |
| 3hrzC01 | 2.20.210.20 | Mainly Beta › Single Sheet › ubp-family deubiquitinating enzyme fold › | 0.53 | 34.0 | 3.77e-01 | 95.7% | 93.9% |
| 3dnhA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.53 | 42.0 | 3.36e-01 | 100.0% | 41.7% |
| 3r5lA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.53 | 43.0 | 3.70e-01 | 98.6% | 56.0% |
| 3oblA00 | 2.40.128.450 | Mainly Beta › Beta Barrel › Lipocalin › | 0.52 | 40.0 | 3.39e-01 | 88.6% | 100.0% |
| 2bhgA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.52 | 35.0 | 3.27e-01 | 95.7% | 53.3% |
| 2nmlA00 | 3.30.2260.10 | Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary | 0.52 | 35.0 | 3.22e-01 | 71.4% | 78.0% |
| 4dyoA02 | 2.30.250.10 | Mainly Beta › Roll › Aminopeptidase i, Domain 2 › Aminopeptidase i, Domain 2 | 0.52 | 43.0 | 3.58e-01 | 98.6% | 95.0% |
| 2ebfX01 | 3.10.670.10 | Alpha Beta › Roll › Secreted effector protein ssei fold › Secreted effector protein ssei. | 0.52 | 42.0 | 3.17e-01 | 94.3% | 45.1% |
| 4h3wA02 | 2.60.120.1260 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 43.0 | 3.40e-01 | 100.0% | 44.1% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2643930 | 224.1.1.2 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Gelsolin | 0.68 | 38.0 | 3.34e-01 | 92.9% | 38.0% |
| 5049794 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.60 | 44.0 | 3.52e-01 | 92.9% | 37.9% |
| 5027350 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.59 | 42.0 | 3.43e-01 | 94.3% | 38.4% |
| 3886475 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.59 | 43.0 | 4.77e-01 | 90.0% | 98.2% |
| 3931206 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.59 | 50.0 | 3.36e-01 | 92.9% | 30.8% |
| 4487969 | 1137.1.1.1 ↗ | a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain › TP_methylase | 0.58 | 42.0 | 3.43e-01 | 100.0% | 41.4% |
| 4489065 | 1137.1.1.1 ↗ | a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain › TP_methylase | 0.58 | 42.0 | 3.47e-01 | 100.0% | 43.2% |
| 4024040 | 822.1.1.0 ↗ | a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain | 0.57 | 37.0 | 3.88e-01 | 92.9% | 72.3% |
| 3359751 | 3397.1.1.0 ↗ | a+b complex topology › Tic22 › Tic22 › Tic22 | 0.57 | 40.0 | 3.48e-01 | 77.1% | 92.0% |
| 4024055 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.56 | 49.0 | 3.63e-01 | 100.0% | 44.2% |
| 4958689 | 821.1.1.14 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › DUF2797 | 0.56 | 34.0 | 3.63e-01 | 100.0% | 70.0% |
| 3265309 | 4026.1.1.0 ↗ | a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) | 0.56 | 45.0 | 3.69e-01 | 94.3% | 63.9% |
| 3275391 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.56 | 45.0 | 3.90e-01 | 100.0% | 57.3% |
| 4327532 | 1137.1.1.0 ↗ | a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain | 0.55 | 37.0 | 3.20e-01 | 100.0% | 40.8% |
| 3989417 | 1137.1.1.0 ↗ | a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain | 0.55 | 36.0 | 3.18e-01 | 100.0% | 42.7% |
| 5068178 | 302.4.1.0 ↗ | a+b two layers › Reverse ferredoxin › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › a+b domain in Acetophenone carboxylase (Apc) alpha subunit | 0.55 | 45.0 | 4.19e-01 | 97.1% | 89.5% |
| 1937720 | 1137.1.1.1 ↗ | a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain › TP_methylase | 0.54 | 37.0 | 3.17e-01 | 100.0% | 42.0% |
| 3628791 | 3680.1.1.1 ↗ | a+b complex topology › Zinc finger FYVE domain-containing protein 9 C-terminal domain › Zinc finger FYVE domain-containing protein 9 C-terminal domain › Zinc finger FYVE domain-containing protein 9 C-terminal domain › SARA_C | 0.54 | 44.0 | 3.51e-01 | 94.3% | 76.8% |
| 5031010 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.54 | 38.0 | 3.86e-01 | 91.4% | 75.7% |
| 4138490 | 1137.1.1.1 ↗ | a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain › TP_methylase | 0.53 | 35.0 | 3.08e-01 | 100.0% | 41.7% |
| 3446372 | 11.1.1.558 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF6598 | 0.53 | 40.0 | 4.07e-01 | 100.0% | 82.9% |
| 4521662 | 1137.1.1.0 ↗ | a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain | 0.53 | 34.0 | 2.98e-01 | 100.0% | 39.2% |
| 3593642 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.52 | 44.0 | 3.95e-01 | 100.0% | 67.4% |
| 3962177 | 1137.1.1.0 ↗ | a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain | 0.52 | 36.0 | 3.22e-01 | 100.0% | 49.5% |
| 4117365 | 11.1.1.3 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ig | 0.51 | 42.0 | 3.66e-01 | 95.7% | 58.2% |
| 3645896 | 327.11.2.11 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1_3 | 0.51 | 36.0 | 3.24e-01 | 100.0% | 52.0% |
| 4120009 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.51 | 42.0 | 3.69e-01 | 95.7% | 61.0% |
| 3284937 | 223.1.1.104 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PF26965 | 0.51 | 38.0 | 2.81e-01 | 82.9% | 37.1% |
| 4964950 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.50 | 42.0 | 3.03e-01 | 100.0% | 79.6% |