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OM868082.1__UPT53449.1__X__00079
Bact-VirOM868082.1__UPT53449.1__X__00079
Identity
- Accession:
- OM868082 ↗
- Kingdom:
- phage
Quality
95.6
mean pLDDT
Taxonomy
TaxID: 2928846
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-51
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3nymA00 | 6.10.290.10 | Special › Helix non-globular › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.76 | 52.0 | 3.77e-01 | 73.5% | 28.2% |
| 2icwG02 | 1.10.10.530 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › mam-mhc complex, Chain D, Domain 2 | 0.71 | 59.0 | 5.03e-01 | 100.0% | 78.7% |
| 4e6nA02 | 6.10.140.1010 | Special › Helix non-globular › Helix Hairpins › | 0.70 | 48.0 | 4.33e-01 | 71.4% | 68.2% |
| 2xzmV01 | 1.10.60.20 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Ribosomal protein S17 | 0.70 | 55.0 | 5.14e-01 | 87.8% | 95.1% |
| 1gs0A01 | 1.20.142.10 | Mainly Alpha › Up-down Bundle › Poly(ADP-ribose) Polymerase; domain 1 › Poly(ADP-ribose) polymerase, regulatory domain | 0.67 | 55.0 | 4.02e-01 | 89.8% | 41.9% |
| 2dofA00 | 1.10.10.440 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain | 0.65 | 56.0 | 4.73e-01 | 100.0% | 72.9% |
| 3ejjB00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.64 | 45.0 | 3.23e-01 | 75.5% | 61.4% |
| 1uajA02 | 1.10.1270.20 | Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › tRNA(m1g37)methyltransferase, domain 2 | 0.64 | 52.0 | 4.67e-01 | 95.9% | 64.4% |
| 2e62A01 | 6.10.140.420 | Special › Helix non-globular › Helix Hairpins › | 0.63 | 40.0 | 3.97e-01 | 91.8% | 61.5% |
| 5zzjA02 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.63 | 50.0 | 3.05e-01 | 87.8% | 28.3% |
| 3k3uA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.63 | 50.0 | 3.72e-01 | 91.8% | 98.5% |
| 2c0gA02 | 1.20.1150.12 | Mainly Alpha › Up-down Bundle › Endoplasmic reticulum protein erp29 › Endoplasmic reticulum resident protein 29, C-terminal domain | 0.62 | 54.0 | 4.25e-01 | 100.0% | 62.3% |
| 1qsdA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.61 | 46.0 | 3.69e-01 | 83.7% | 97.1% |
| 1v71A01 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.61 | 47.0 | 3.17e-01 | 89.8% | 21.3% |
| 1rm6B02 | 3.30.390.50 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain | 0.60 | 49.0 | 3.91e-01 | 95.9% | 86.0% |
| 2pybA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.59 | 48.0 | 3.50e-01 | 95.9% | 54.3% |
| 3n98A01 | 3.20.110.10 | Alpha Beta › Alpha-Beta Barrel › 7-stranded beta/alpha barrel › Glycoside hydrolase 38, N terminal domain | 0.56 | 46.0 | 2.70e-01 | 91.8% | 25.0% |
| 2zb9A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.53 | 41.0 | 4.12e-01 | 87.8% | 80.0% |
| 3no6A00 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.53 | 43.0 | 2.89e-01 | 100.0% | 61.3% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5077460 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.72 | 56.0 | 5.08e-01 | 85.7% | 100.0% |
| 3484948 | 5050.1.1.1 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr | 0.68 | 48.0 | 3.03e-01 | 73.5% | 78.2% |
| 4527330 | 7010.1.1.0 ↗ | alpha arrays › Activation-binding domain of RNA polymerase II mediator › Activation-binding domain of RNA polymerase II mediator › Activation-binding domain of RNA polymerase II mediator | 0.67 | 46.0 | 4.03e-01 | 71.4% | 54.3% |
| 4962781 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.66 | 44.0 | 3.79e-01 | 73.5% | 45.3% |
| 4969421 | 4271.1.1.3 ↗ | alpha complex topology › PriB N-terminal domain-like › PriB N-terminal domain-like › PriB N-terminal domain-like › DNA_primase_lrg_N | 0.64 | 55.0 | 3.62e-01 | 100.0% | 27.0% |
| 3285780 | 142.1.1.26 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Transgly_assoc | 0.64 | 56.0 | 4.75e-01 | 100.0% | 96.2% |
| 51182 | 106.1.1.0 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like | 0.62 | 50.0 | 3.71e-01 | 91.8% | 98.5% |
| 3937988 | 632.7.1.41 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › Rer1 | 0.62 | 44.0 | 3.47e-01 | 75.5% | 61.0% |
| 3165999 | 3291.1.1.213 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › MscS_porin | 0.62 | 53.0 | 3.49e-01 | 98.0% | 69.0% |
| 4025809 | 604.6.1.22 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › EMC4 | 0.62 | 50.0 | 3.92e-01 | 91.8% | 77.3% |
| 3719896 | 3755.2.1.0 ↗ | alpha bundles › YscO-like › Flagellar FliJ protein › Flagellar FliJ protein | 0.61 | 42.0 | 3.40e-01 | 71.4% | 47.4% |
| 3987991 | 5086.1.1.94 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HB_LcnD | 0.61 | 54.0 | 3.54e-01 | 100.0% | 24.3% |
| 3494239 | 192.29.1.137 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › Otopetrin | 0.61 | 47.0 | 3.15e-01 | 85.7% | 48.7% |
| 4998530 | 2498.1.1.10 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M48 | 0.58 | 49.0 | 3.06e-01 | 91.8% | 32.1% |
| 3398253 | 601.4.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains › NIT | 0.58 | 48.0 | 3.61e-01 | 98.0% | 70.0% |
| 3926434 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 47.0 | 2.67e-01 | 100.0% | 11.8% |
| 3802084 | 6155.1.1.14 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › Rer1 | 0.54 | 47.0 | 3.67e-01 | 98.0% | 72.4% |
| 3187470 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.53 | 41.0 | 2.66e-01 | 91.8% | 72.1% |
| 3260703 | 142.1.1.5 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › SRI | 0.52 | 43.0 | 3.74e-01 | 95.9% | 86.3% |