←Back to structures
OM868082.1__UPT53456.1__X__00086
Bact-VirOM868082.1__UPT53456.1__X__00086
Identity
- Accession:
- OM868082 ↗
- Kingdom:
- phage
Quality
89.8
mean pLDDT
Taxonomy
TaxID: 2928846
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-150
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1yd0A00 | 3.40.1440.10 | Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.63 | 35.0 | 4.45e-01 | 82.9% | 89.9% |
| 5tpvB00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.63 | 30.0 | 3.09e-01 | 70.5% | 45.7% |
| 1vkzA02 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.62 | 32.0 | 4.26e-01 | 80.8% | 100.0% |
| 1ti2B03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 28.0 | 3.56e-01 | 93.2% | 71.4% |
| 3dzaA02 | 6.10.250.2140 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.54 | 21.0 | 3.16e-01 | 93.8% | 82.3% |
| 3cvzB01 | 3.30.1490.290 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Low molecular weight S-layer protein, domain 1 | 0.54 | 35.0 | 4.13e-01 | 97.3% | 96.0% |
| 3oqgA00 | 3.40.1440.50 | Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › | 0.52 | 37.0 | 3.51e-01 | 73.3% | 65.3% |
| 2pn5A05 | 2.60.40.1930 | Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain | 0.52 | 31.0 | 3.67e-01 | 100.0% | 87.5% |
| 1hd5A00 | 2.40.40.10 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain | 0.51 | 36.0 | 3.26e-01 | 72.6% | 100.0% |
| 4u7cB04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.50 | 35.0 | 3.94e-01 | 74.0% | 93.6% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5070656 | 821.1.1.15 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › DUF7508 | 0.71 | 37.0 | 4.90e-01 | 85.6% | 89.4% |
| 4929079 | 821.1.1.15 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › DUF7508 | 0.70 | 39.0 | 4.87e-01 | 88.4% | 86.2% |
| 5030770 | 821.1.1.0 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.65 | 37.0 | 4.62e-01 | 86.3% | 88.4% |
| 4054044 | 821.1.1.9 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › PF30054 | 0.58 | 37.0 | 4.42e-01 | 82.9% | 93.0% |
| 4946319 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.55 | 33.0 | 4.04e-01 | 70.5% | 98.8% |
| 5063985 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.55 | 26.0 | 3.34e-01 | 91.8% | 77.5% |