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OM912979.1__UPW42572.1__BAHKABFF_00022__00022

Bact-Vir

OM912979.1__UPW42572.1__BAHKABFF_00022__00022

Identity

Accession:
OM912979 ↗
Kingdom:
phage

Quality

92.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Swiduovirus› Salmonella_phage_CF-SP1

TaxID: 2935507

Cluster

View cluster (23 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-57
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04448.18 best DUF551 24.0 7.90e-05 100.0% 83.8%
CATH (48)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wzoA01 2.30.30.370 Mainly Beta › Roll › SH3 type barrels. › FAH 0.81 56.0 6.15e-01 81.1% 97.5%
4dq2A03 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.74 58.0 6.13e-01 84.9% 97.9%
1fx7B03 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.72 61.0 5.42e-01 98.1% 98.8%
7z0kB01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 49.0 4.69e-01 77.4% 96.9%
1y0mA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 50.0 4.79e-01 79.2% 96.7%
4gzuB03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.66 50.0 4.29e-01 84.9% 81.3%
1ssfA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 49.0 4.87e-01 84.9% 94.5%
5h4eA02 3.30.920.50 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Beta-1,3-glucanase, C-terminal domain 0.64 54.0 4.26e-01 98.1% 73.9%
1sbxA00 3.10.260.20 Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › Ski 0.63 44.0 3.57e-01 73.6% 82.1%
2p84A02 2.30.30.290 Mainly Beta › Roll › SH3 type barrels. › YopX-like domains 0.62 51.0 4.69e-01 98.1% 75.3%
3p26A03 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.62 53.0 4.18e-01 96.2% 78.2%
2cofA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 43.0 3.66e-01 84.9% 70.1%
5xpyA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 44.0 3.59e-01 83.0% 62.0%
3pvlA04 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 43.0 3.67e-01 83.0% 78.8%
1yzbA01 3.90.70.40 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.59 51.0 3.94e-01 100.0% 53.2%
2ej8B00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 42.0 3.36e-01 83.0% 78.6%
3d8dA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 44.0 3.36e-01 84.9% 87.1%
1kjzA03 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.58 47.0 4.05e-01 96.2% 70.7%
3wndA03 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.58 49.0 4.08e-01 96.2% 74.5%
1bm8A00 3.10.260.10 Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › Transcription regulator HTH, APSES-type DNA-binding domain 0.57 38.0 3.19e-01 71.7% 70.7%
1wgqA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 41.0 3.41e-01 83.0% 69.7%
3qijB03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 42.0 3.64e-01 83.0% 80.9%
8ep4C01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 44.0 2.91e-01 90.6% 47.1%
4pq0A02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 41.0 3.54e-01 83.0% 76.3%
3fssA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 42.0 3.67e-01 83.0% 81.4%
2j7qA00 3.90.70.120 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.56 45.0 3.11e-01 100.0% 41.6%
3ge2A00 2.40.128.50 Mainly Beta › Beta Barrel › Lipocalin › 0.56 45.0 3.92e-01 94.3% 93.3%
2zbvC02 2.40.30.90 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacterial fluorinating enzyme like 0.55 46.0 3.86e-01 100.0% 92.2%
2da0A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 45.0 3.61e-01 94.3% 72.8%
6bm0A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 40.0 2.46e-01 81.1% 20.9%
1mbmA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.54 41.0 3.79e-01 86.8% 87.5%
5umsA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 39.0 3.31e-01 83.0% 74.5%
3n6rA03 3.30.700.30 Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › 0.53 44.0 3.39e-01 96.2% 80.5%
1ukfA00 3.90.70.20 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.53 45.0 3.15e-01 100.0% 48.4%
4inaA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.53 41.0 2.91e-01 88.7% 88.3%
4r3dA03 2.60.120.1680 Mainly Beta › Sandwich › Jelly Rolls › 0.53 45.0 3.44e-01 100.0% 67.9%
2wm1A00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.52 41.0 2.53e-01 86.8% 26.5%
1smpI00 2.40.128.10 Mainly Beta › Beta Barrel › Lipocalin › 0.52 41.0 3.51e-01 96.2% 85.0%
4jqtA01 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.52 43.0 3.02e-01 100.0% 57.2%
3ottB02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 42.0 2.66e-01 92.5% 34.5%
3ligA02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.52 42.0 3.11e-01 100.0% 84.6%
2w5eA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.51 38.0 3.61e-01 83.0% 78.5%
3u1xA00 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.51 42.0 2.90e-01 100.0% 66.4%
2wdtC02 3.30.1490.420 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Ubiquitin carboxyl-terminal hydrolase, domain 2 0.51 42.0 3.56e-01 100.0% 90.1%
8e7cA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.51 37.0 3.29e-01 81.1% 66.7%
1uf2C02 2.60.120.170 Mainly Beta › Sandwich › Jelly Rolls › 0.51 37.0 2.77e-01 83.0% 80.3%
2yj6A02 3.40.1110.10 Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N 0.50 39.0 3.30e-01 88.7% 70.5%
3d30A02 2.60.40.760 Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain 0.50 40.0 3.42e-01 94.3% 89.4%
ECOD (64)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4991638 11.9.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › FAH › FAH › FAA_hydrolase 0.80 60.0 3.68e-01 81.1% 27.5%
5009412 11.9.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › FAH › FAH › FAA_hydrolase 0.80 60.0 3.77e-01 81.1% 17.7%
3954420 11.9.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › FAH › FAH › FAA_hydrolase 0.77 58.0 3.56e-01 81.1% 22.0%
3954254 4.1.1.387 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_Rv0428c 0.73 60.0 5.66e-01 94.3% 92.3%
4182977 4.1.1.297 ↗ beta barrels › SH3 › SH3 › SH3 › YajC 0.70 60.0 5.78e-01 98.1% 86.7%
2773560 4.10.1.0 ↗ beta barrels › SH3 › Fumarylacetoacetate hydrolase, FAH, N-terminal domain › Fumarylacetoacetate hydrolase, FAH, N-terminal domain 0.67 50.0 4.69e-01 83.0% 94.0%
3226939 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.66 50.0 4.08e-01 83.0% 72.0%
4938404 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 53.0 5.24e-01 90.6% 87.3%
5002449 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 52.0 5.18e-01 90.6% 90.9%
5023740 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 50.0 5.18e-01 88.7% 96.0%
5031433 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.64 49.0 4.02e-01 84.9% 75.0%
4935681 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 52.0 5.22e-01 92.5% 90.9%
4926953 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.64 49.0 3.85e-01 84.9% 64.9%
3754343 4.1.1.311 ↗ beta barrels › SH3 › SH3 › SH3 › BRWD_AD 0.63 51.0 4.74e-01 98.1% 85.3%
3192436 220.1.1.129 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Swc3 0.62 46.0 3.27e-01 83.0% 48.6%
4966534 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 48.0 4.94e-01 90.6% 96.0%
4027712 220.1.1.287 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PF26279 0.61 45.0 3.60e-01 83.0% 80.0%
3604406 219.1.1.76 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF553 0.61 45.0 3.24e-01 81.1% 29.4%
4575824 2.8.1.2 ↗ beta barrels › OB-fold › mu transposases-C › mu transposases-C › Mu-transpos_C_2 0.61 43.0 4.04e-01 77.4% 94.3%
4982334 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 48.0 4.83e-01 92.5% 92.7%
3868717 220.1.1.173 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_CERK 0.61 46.0 3.60e-01 84.9% 79.2%
3273591 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.60 44.0 3.47e-01 84.9% 50.8%
3248163 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.60 44.0 3.38e-01 84.9% 55.0%
4203469 375.1.1.47 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › BshC 0.58 44.0 4.39e-01 83.0% 92.7%
3412760 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 42.0 3.46e-01 79.2% 79.0%
5058340 1.1.8.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.58 47.0 4.34e-01 96.2% 70.0%
5046585 66.1.1.0 ↗ beta sandwiches › ISP domain › ISP domain › ISP domain 0.58 44.0 4.17e-01 84.9% 76.9%
3290662 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.57 46.0 3.67e-01 100.0% 49.2%
4120366 375.1.1.47 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › BshC 0.57 44.0 4.42e-01 84.9% 94.5%
3269121 220.1.1.20 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_TFIIH 0.57 41.0 3.44e-01 83.0% 74.5%
3250883 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 43.0 3.54e-01 84.9% 81.9%
3334232 4.2.1.4 ↗ beta barrels › SH3 › SAND › SAND › TDBD 0.57 41.0 3.85e-01 81.1% 80.0%
3251856 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.56 41.0 3.23e-01 83.0% 55.3%
3432251 4.2.1.1 ↗ beta barrels › SH3 › SAND › SAND › SAND 0.56 41.0 3.89e-01 84.9% 82.9%
3498575 220.1.1.22 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.56 41.0 3.50e-01 83.0% 72.0%
4106342 220.1.1.22 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.56 41.0 3.59e-01 83.0% 85.6%
3266483 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 42.0 3.44e-01 84.9% 68.2%
134104 9.1.1.22 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF3642 0.56 45.0 3.92e-01 94.3% 93.3%
3611221 220.1.1.19 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Rttp106-like_middle 0.56 41.0 3.43e-01 84.9% 80.0%
3516743 220.1.1.19 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Rttp106-like_middle 0.56 40.0 2.95e-01 81.1% 44.1%
3713382 220.1.1.19 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Rttp106-like_middle 0.55 41.0 3.43e-01 84.9% 80.0%
3453949 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.55 46.0 2.92e-01 100.0% 39.1%
3599169 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 41.0 3.40e-01 84.9% 78.1%
3656434 4.2.1.0 ↗ beta barrels › SH3 › SAND › SAND 0.55 39.0 3.72e-01 81.1% 82.9%
3427234 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.55 47.0 3.10e-01 100.0% 52.7%
3705577 220.1.1.19 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Rttp106-like_middle 0.55 40.0 3.01e-01 81.1% 48.7%
5012022 1.1.8.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.55 42.0 3.92e-01 96.2% 64.9%
2712015 220.1.1.19 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Rttp106-like_middle 0.55 41.0 3.64e-01 83.0% 86.4%
3593931 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 40.0 2.96e-01 81.1% 45.6%
3253063 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.54 40.0 3.24e-01 83.0% 67.8%
4031797 375.1.1.47 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › BshC 0.54 41.0 4.07e-01 83.0% 90.9%
3743110 220.1.1.19 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Rttp106-like_middle 0.54 40.0 3.35e-01 84.9% 78.1%
3468148 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.54 46.0 3.19e-01 100.0% 37.9%
3930756 5.1.4.48 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › BBS1 0.54 44.0 2.65e-01 92.5% 23.8%
4122019 220.1.1.19 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Rttp106-like_middle 0.54 39.0 3.23e-01 84.9% 70.4%
3598862 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 39.0 3.11e-01 81.1% 76.7%
4063575 220.1.1.19 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Rttp106-like_middle 0.54 40.0 3.27e-01 84.9% 70.4%
3313714 4.2.1.0 ↗ beta barrels › SH3 › SAND › SAND 0.53 39.0 3.63e-01 84.9% 77.3%
4019290 220.1.1.19 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Rttp106-like_middle 0.53 39.0 3.19e-01 84.9% 66.7%
3236787 2484.1.1.200 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FTH 0.53 41.0 3.12e-01 84.9% 56.2%
4987739 2003.1.5.13 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth 0.53 40.0 2.64e-01 83.0% 42.1%
2990561 10.1.1.74 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › PF30275 0.53 44.0 2.90e-01 100.0% 45.7%
3436173 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.52 43.0 2.74e-01 100.0% 42.8%
3988707 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.51 41.0 4.07e-01 88.7% 90.9%