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OM913597.1__UOW66233.1__vBAspABolek_08__00008

Bact-Vir

OM913597.1__UOW66233.1__vBAspABolek_08__00008

Identity

Accession:
OM913597 ↗
Kingdom:
phage

Quality

78.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Autographivirales› Autoscriptoviridae› Bolekvirus› Aeromonas_phage_vB_AspA_Bolek

TaxID: 2924889

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 9-117
PDB
Domain cluster: rep: MK562503.1__QBP32903.1__HRP29_gp3__00003__D12-132
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1xu6A00 4.10.110.20 Few Secondary Structures › Irregular › Spasmolytic Protein; domain 1 › Variant surface glycoprotein MITAT 1.2, VSG 221, C-terminal domain 0.62 33.0 3.75e-01 73.4% 68.8%
1t3aA00 3.90.1240.10 Alpha Beta › Alpha-Beta Complex › Zincin-like › "Metalloproteases (""zincins""), catalytic domain like" 0.59 43.0 2.88e-01 74.3% 46.3%
2wteA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 33.0 3.91e-01 78.9% 84.7%
2is9A01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.56 41.0 4.10e-01 77.1% 79.6%
1r0vA02 3.40.1170.20 Alpha Beta › 3-Layer(aba) Sandwich › MutS, DNA mismatch repair protein, domain I › tRNA intron endonuclease, N-terminal domain 0.54 24.0 2.86e-01 78.0% 58.7%
1dp3A00 1.10.10.450 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › TraM protein, DNA-binding 0.53 23.0 3.11e-01 85.3% 76.4%
1e1hB01 1.20.58.540 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.53 37.0 3.79e-01 96.3% 75.7%
4gcvC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 37.0 3.45e-01 81.7% 56.0%
1zarA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 34.0 3.73e-01 86.2% 79.8%
1uurA03 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.52 38.0 4.13e-01 89.9% 97.7%
ECOD (42)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4976712 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.62 48.0 5.21e-01 88.1% 98.9%
7939 4986.1.1.4 ↗ few secondary structure elements › Variant surface glycoprotein MITAT 1.2, VSG 221, C-terminal domain › Variant surface glycoprotein MITAT 1.2, VSG 221, C-terminal domain › Variant surface glycoprotein MITAT 1.2, VSG 221, C-terminal domain › PF29633 0.62 33.0 3.75e-01 73.4% 68.8%
5048947 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.61 51.0 5.28e-01 95.4% 97.0%
4665476 5081.1.1.1 ↗ alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.58 44.0 3.55e-01 79.8% 44.7%
3726615 101.1.2.520 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF7779 0.57 41.0 4.04e-01 87.2% 69.6%
3690414 101.1.2.359 ↗ alpha arrays › HTH › HTH › winged helix domain › GPIID_WHD 0.57 42.0 3.51e-01 76.1% 48.1%
3691878 101.1.2.359 ↗ alpha arrays › HTH › HTH › winged helix domain › GPIID_WHD 0.57 41.0 4.10e-01 76.1% 77.4%
4012859 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.56 40.0 4.06e-01 85.3% 75.2%
3237702 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.56 36.0 3.98e-01 73.4% 82.4%
3901597 5054.1.1.4 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans,Ion_trans_N 0.56 45.0 3.26e-01 86.2% 90.6%
3731261 101.1.2.520 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF7779 0.56 37.0 3.96e-01 85.3% 78.9%
4023293 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.55 42.0 4.22e-01 80.7% 97.3%
4022449 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.55 40.0 3.50e-01 77.1% 60.0%
3191365 101.1.2.520 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF7779 0.55 39.0 4.10e-01 85.3% 84.2%
4940184 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.55 35.0 3.96e-01 86.2% 87.5%
3722993 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.55 41.0 3.95e-01 80.7% 77.7%
3316879 5054.1.1.0 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels 0.55 42.0 2.81e-01 82.6% 41.6%
4973736 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.54 36.0 4.20e-01 74.3% 100.0%
3297063 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.54 38.0 3.94e-01 85.3% 79.0%
4933236 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.54 39.0 3.89e-01 74.3% 82.7%
4028213 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.53 37.0 3.52e-01 82.6% 58.5%
4013939 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.53 41.0 3.66e-01 85.3% 62.4%
3634304 101.1.2.359 ↗ alpha arrays › HTH › HTH › winged helix domain › GPIID_WHD 0.53 38.0 3.25e-01 75.2% 48.9%
3730487 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 41.0 3.75e-01 84.4% 62.8%
3315363 101.1.2.386 ↗ alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.52 38.0 3.41e-01 86.2% 52.5%
4022653 101.1.2.520 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF7779 0.52 38.0 3.85e-01 85.3% 78.1%
3710117 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 35.0 3.80e-01 71.6% 83.3%
3879122 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 36.0 3.42e-01 71.6% 82.3%
4962334 150.1.2.7 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Heme oxygenase/Ribonucleotide reductase › PaaA_PaaC 0.52 40.0 3.06e-01 86.2% 75.6%
4534098 101.1.2.19 ↗ alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac 0.52 42.0 3.66e-01 89.9% 93.1%
4968035 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.52 36.0 3.74e-01 70.6% 86.7%
3371197 207.1.1.214 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_8, LRR_RPS2, LRR_14 0.51 38.0 2.42e-01 86.2% 14.0%
3466475 101.1.2.386 ↗ alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.51 35.0 3.36e-01 87.2% 59.2%
5008813 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 42.0 3.73e-01 91.7% 94.5%
3816427 101.1.2.386 ↗ alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.51 37.0 3.76e-01 85.3% 77.1%
3478717 101.1.2.392 ↗ alpha arrays › HTH › HTH › winged helix domain › SNRNP200_wHTH 0.51 40.0 3.99e-01 85.3% 95.7%
4017591 101.1.2.520 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF7779 0.51 35.0 3.90e-01 71.6% 96.2%
4168436 4012.3.1.3 ↗ a+b two layers › SSHS domain › SSHS domain in CRISPR-associated endonuclease Cas9 › SSHS domain in CRISPR-associated endonuclease Cas9 › Cas9_PI2 0.51 29.0 3.61e-01 74.3% 95.4%
None — 0.50 40.0 3.91e-01 86.2% 92.5%
3975833 4156.1.1.2 ↗ alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › HA2_N,HA2_C 0.50 41.0 3.31e-01 88.1% 100.0%
4962430 2002.1.1.25 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HMGL-like 0.50 37.0 2.80e-01 79.8% 83.8%
3645693 101.1.2.516 ↗ alpha arrays › HTH › HTH › winged helix domain › PF25895 0.50 36.0 3.72e-01 74.3% 81.0%
D2 medium residues 121-158
PDB
Domain cluster: representative