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OM913599.1__UOW66352.1__vBAspATola_09__00009

Bact-Vir

OM913599.1__UOW66352.1__vBAspATola_09__00009

Identity

Accession:
OM913599 ↗
Kingdom:
phage

Quality

87.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-60
PDB
Domain cluster: representative
CATH (45)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2y39A00 1.20.120.1490 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.84 62.0 4.87e-01 79.3% 40.9%
1n5uA01 1.10.246.10 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › 0.82 62.0 5.01e-01 79.3% 57.3%
4ixjA01 3.30.1300.80 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 0.80 64.0 5.84e-01 87.9% 67.5%
4gbjC02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.79 60.0 4.48e-01 86.2% 34.8%
3rv0C02 1.10.1520.10 Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain 0.78 65.0 4.79e-01 91.4% 38.2%
2co9A00 1.10.30.10 Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain 0.77 54.0 4.44e-01 72.4% 41.2%
3ousA00 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.77 62.0 5.44e-01 86.2% 79.3%
7r97A01 1.10.1520.10 Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain 0.77 68.0 4.98e-01 98.3% 75.0%
2khmA01 1.10.10.1350 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Spidroin domain, C-terminal domain 0.76 55.0 4.48e-01 77.6% 41.7%
5oklA01 1.10.246.10 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › 0.75 56.0 4.61e-01 79.3% 91.1%
1wgfA01 1.10.30.10 Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain 0.75 51.0 5.33e-01 72.4% 77.4%
7oufB01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.75 62.0 4.53e-01 89.7% 34.9%
2qywA00 1.20.58.400 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins 0.74 55.0 4.64e-01 79.3% 48.4%
3ermB00 1.10.10.710 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PSPTO_1197 like 0.74 59.0 5.74e-01 87.9% 81.2%
6fakA01 1.10.246.10 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › 0.74 55.0 4.67e-01 79.3% 57.9%
3um7A03 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.74 59.0 4.87e-01 87.9% 80.6%
6wshA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 59.0 6.06e-01 87.9% 98.2%
2hydA01 1.20.1560.10 Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain 0.73 66.0 4.04e-01 100.0% 74.9%
3pltA00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.73 52.0 3.47e-01 75.9% 20.6%
1qrvA00 1.10.30.10 Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain 0.72 49.0 4.61e-01 74.1% 56.2%
1gvfB00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.72 58.0 3.74e-01 89.7% 42.2%
5uckB00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.71 56.0 3.57e-01 87.9% 47.9%
1s8nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 55.0 5.54e-01 84.5% 94.8%
2gtsA00 1.10.287.850 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain 0.71 52.0 4.71e-01 77.6% 64.9%
3ragB00 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.71 62.0 4.11e-01 96.6% 25.2%
4g6dB02 6.10.140.1800 Special › Helix non-globular › Helix Hairpins › 0.71 59.0 5.31e-01 98.3% 66.7%
2eb1C00 1.10.1520.10 Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain 0.70 58.0 4.19e-01 93.1% 71.6%
2bnlC00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.70 52.0 4.02e-01 81.0% 37.3%
3mvpA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.69 61.0 4.54e-01 100.0% 95.3%
1kl7A02 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.67 50.0 3.25e-01 81.0% 39.4%
1jwjA01 3.90.340.10 Alpha Beta › Alpha-Beta Complex › Nitric Oxide Synthase; Chain A, domain 1 › Nitric Oxide Synthase; Chain A, domain 1 0.66 49.0 3.56e-01 81.0% 30.2%
1nmrA01 1.10.1900.10 Mainly Alpha › Orthogonal Bundle › c-terminal domain of poly(a) binding protein › c-terminal domain of poly(a) binding protein 0.66 55.0 5.07e-01 100.0% 72.4%
4dxwA02 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.66 54.0 4.44e-01 94.8% 72.3%
2ahoB02 1.10.150.190 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Translation initiation factor 2; subunit 1; domain 2 0.66 54.0 4.75e-01 96.6% 91.2%
1r4sA00 3.10.270.10 Alpha Beta › Roll › Urate Oxidase › Urate Oxidase; 0.65 50.0 3.20e-01 87.9% 16.7%
2ajrA01 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.65 50.0 3.26e-01 84.5% 19.2%
4griA04 1.10.8.70 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutamate-tRNA synthetase, class I, anticodon-binding domain 1 0.65 45.0 4.64e-01 74.1% 90.6%
3ehfD01 1.20.5.1930 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.64 51.0 4.96e-01 86.2% 82.5%
1qo0D02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 43.0 4.67e-01 72.4% 97.8%
3k6hA01 3.40.109.10 Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase 0.62 51.0 3.68e-01 91.4% 71.9%
1n69B00 1.10.225.10 Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like 0.58 42.0 3.90e-01 81.0% 71.2%
4h63K00 1.10.287.3490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.58 42.0 3.64e-01 81.0% 51.0%
4tvsA00 3.40.50.12190 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.57 41.0 2.86e-01 79.3% 51.8%
1khcA02 1.10.720.50 Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › PWWP, helical domain 0.55 44.0 4.13e-01 86.2% 72.5%
4fcgA00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.51 38.0 2.39e-01 77.6% 17.2%
ECOD (40)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3741853 148.1.1.12 alpha arrays › Histone-like › Histone-related › Histone › Bromo_TP 0.89 71.0 5.99e-01 84.5% 54.4%
4016806 101.1.10.60 alpha arrays › HTH › HTH › Cyclin-like › DUF2293 0.89 71.0 5.67e-01 84.5% 54.3%
3410442 190.1.1.0 alpha arrays › HMG-box-like › HMG-box › HMG-box 0.84 59.0 4.43e-01 72.4% 33.6%
4543805 230.3.1.1 a+b two layers › T-fold › Elongation factor Ts (EF-Ts), dimerisation domain › Elongation factor Ts (EF-Ts), dimerisation domain › EF_TS 0.83 61.0 4.60e-01 77.6% 34.9%
3588902 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.83 67.0 5.03e-01 89.7% 37.1%
3170390 3721.1.1.0 alpha bundles › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › Protein regulator of cytokinesis 1 (PRC1) dimerization domain 0.82 61.0 5.71e-01 79.3% 67.1%
3589064 5076.2.1.0 alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ 0.81 68.0 4.50e-01 91.4% 41.9%
3481083 4177.1.1.0 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.80 64.0 4.06e-01 84.5% 19.3%
3885705 190.1.1.1 alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box 0.80 57.0 4.93e-01 77.6% 50.6%
3506153 190.1.1.1 alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box 0.79 56.0 4.94e-01 75.9% 51.8%
4102250 190.1.1.1 alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box 0.79 56.0 4.98e-01 74.1% 55.0%
4286282 507.1.1.1 alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB 0.79 60.0 4.29e-01 87.9% 29.4%
3588971 6026.1.1.0 alpha duplicates or obligate multimers › cwf21 domain › cwf21 domain › cwf21 domain 0.78 61.0 5.56e-01 82.8% 64.0%
3486557 190.1.1.0 alpha arrays › HMG-box-like › HMG-box › HMG-box 0.77 52.0 4.70e-01 74.1% 51.2%
5069130 6026.1.1.0 alpha duplicates or obligate multimers › cwf21 domain › cwf21 domain › cwf21 domain 0.77 54.0 5.77e-01 74.1% 90.0%
5051886 5054.1.1.0 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels 0.77 62.0 5.52e-01 86.2% 82.5%
4224925 4336.2.1.1 alpha duplicates or obligate multimers › YheA/YmcA-like › Protein SUS1 › Protein SUS1 › EnY2 0.76 57.0 4.87e-01 79.3% 51.1%
3278450 547.1.1.1 alpha duplicates or obligate multimers › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › GlutR_dimer 0.76 56.0 5.10e-01 81.0% 62.5%
4258385 190.1.1.1 alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box 0.76 54.0 4.93e-01 77.6% 57.3%
3960463 103.12.1.0 alpha arrays › RuvA-C › ANTAR domain › ANTAR domain 0.76 63.0 6.24e-01 91.4% 100.0%
3620454 190.1.1.1 alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box 0.75 53.0 3.89e-01 74.1% 29.3%
3204262 5051.1.1.15 alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › K_trans 0.75 65.0 4.13e-01 100.0% 65.9%
3598952 5054.1.1.0 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels 0.75 66.0 5.01e-01 96.6% 57.7%
3284564 191.1.1.0 alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain 0.75 56.0 4.33e-01 82.8% 37.3%
3705890 190.1.1.1 alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box 0.74 53.0 4.44e-01 77.6% 45.3%
4344838 190.1.1.1 alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box 0.74 52.0 4.70e-01 77.6% 53.8%
3959245 103.12.1.1 alpha arrays › RuvA-C › ANTAR domain › ANTAR domain › ANTAR 0.74 60.0 5.30e-01 89.7% 70.6%
3503648 190.1.1.1 alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box 0.74 56.0 5.58e-01 84.5% 78.3%
3518379 3502.1.1.1 alpha bundles › uncharacterized conserved protein › uncharacterized conserved protein › uncharacterized conserved protein › YebG 0.73 58.0 5.94e-01 87.9% 94.5%
185221 3502.1.1.1 alpha bundles › uncharacterized conserved protein › uncharacterized conserved protein › uncharacterized conserved protein › YebG 0.73 59.0 5.63e-01 89.7% 79.1%
2144829 1075.4.1.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane 0.73 66.0 4.03e-01 100.0% 74.5%
4329615 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.72 53.0 5.04e-01 79.3% 68.6%
3470186 190.1.1.1 alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box 0.71 50.0 4.35e-01 74.1% 48.9%
3171915 190.1.1.1 alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box 0.71 50.0 4.41e-01 72.4% 49.4%
3893243 190.1.1.9 alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_WDHD1 0.71 47.0 4.84e-01 72.4% 72.7%
3475770 5069.1.1.38 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Frag1 0.68 59.0 4.28e-01 100.0% 55.3%
3398172 190.1.1.1 alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box 0.68 57.0 4.61e-01 89.7% 56.2%
3239423 190.1.1.0 alpha arrays › HMG-box-like › HMG-box › HMG-box 0.68 46.0 4.91e-01 70.7% 95.6%
3321923 603.2.1.16 alpha bundles › STAT-like › STAT › STAT › DUF3537 0.66 54.0 3.52e-01 96.6% 39.7%
3989860 191.1.1.12 alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_8 0.57 43.0 3.71e-01 86.2% 64.0%