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OM913894.1__UOL49233.1__X__00025

Bact-Vir

OM913894.1__UOL49233.1__X__00025

Identity

Accession:
OM913894 ↗
Kingdom:
phage

Quality

85.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Stenotrophomonas_phage_BUCT603B1

TaxID: 2930392

Cluster

View cluster (8 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 39-181
PDB
Domain cluster: rep: NC_047778.1__YP_009787320.1__QLL94_gp20__00020__D40-226
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3rd4B00 2.40.50.660 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.72 40.0 5.05e-01 91.6% 92.7%
2in5A00 2.40.360.10 Mainly Beta › Beta Barrel › YmcC-like fold › YmcC-like 0.67 33.0 3.00e-01 76.9% 34.9%
4p2iA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.54 41.0 4.44e-01 79.0% 98.3%
2vqeE01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.53 25.0 3.48e-01 75.5% 96.9%
1xteA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.52 38.0 4.12e-01 74.8% 99.1%
3iq2A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.52 38.0 4.12e-01 77.6% 90.2%
3of6E00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 33.0 3.81e-01 95.1% 91.3%
4ckmB00 2.170.210.20 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain 0.50 39.0 3.97e-01 90.9% 82.6%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3964606 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.80 71.0 6.68e-01 100.0% 78.8%
5029482 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.64 32.0 4.13e-01 90.9% 85.0%
3621948 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.55 41.0 4.04e-01 78.3% 90.3%
3719807 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.54 41.0 4.17e-01 78.3% 97.9%
5064585 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.54 27.0 3.41e-01 74.8% 77.8%
3225458 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.53 40.0 3.89e-01 78.3% 84.5%
3880705 277.1.1.0 ↗ a+b two layers › PX domain › PX domain › PX domain 0.52 38.0 4.09e-01 76.9% 91.2%
4586503 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.52 39.0 4.02e-01 79.0% 98.5%
4962934 331.2.1.15 ↗ a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › DUF7845 0.50 32.0 3.17e-01 76.2% 57.5%
D2 high residues 183-257
PDB
Domain cluster: rep: ON531987.1__UUG68445.1__X__00026__D70-134
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1gv2A02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.54 27.0 3.31e-01 97.3% 76.1%
2d4xA00 1.20.1330.10 Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain 0.52 41.0 3.11e-01 93.3% 93.0%
7ahhC02 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.51 33.0 3.03e-01 96.0% 47.6%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3209145 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.64 27.0 2.69e-01 97.3% 35.0%
3578105 4969.1.1.2 ↗ alpha bundles › thumb domain in bacteriophage RB69-like DNA polymerase I › thumb domain in bacteriophage RB69-like DNA polymerase I › thumb domain in bacteriophage RB69-like DNA polymerase I › POL2_thumb 0.53 39.0 2.91e-01 81.3% 81.8%
3916429 109.4.1.2897 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT, HEAT_EF3_GNC1, HEAT_EF3_N, TPR_DNAAF5, PF26715 0.52 44.0 2.52e-01 98.7% 12.4%
3212880 2498.1.1.53 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M13 0.52 41.0 3.02e-01 92.0% 69.1%
3773683 109.4.1.1393 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF26715 0.50 42.0 3.35e-01 98.7% 70.3%
3787624 109.4.1.646 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › LCD1 0.50 42.0 2.63e-01 100.0% 42.7%