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OM971648.1__UQJ95167.1__IANJMKHF_00261__00261
Bact-VirOM971648.1__UQJ95167.1__IANJMKHF_00261__00261
Identity
- Accession:
- OM971648 ↗
- Kingdom:
- phage
Quality
90.0
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Slopekvirus›
Klebsiella_phage_CPRSA
TaxID: 2935722
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-64
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13638.13 best | PIN_4 | 46.6 | 6.00e-12 | 96.8% | 47.0% |
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2hwwB00 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.88 | 81.0 | 5.89e-01 | 100.0% | 41.4% |
| 2hwyA00 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.86 | 75.0 | 6.00e-01 | 100.0% | 50.9% |
| 3ix7A00 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.75 | 65.0 | 5.15e-01 | 100.0% | 50.4% |
| 5ywwA01 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.68 | 57.0 | 4.76e-01 | 96.8% | 59.1% |
| 2iw3B01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.68 | 61.0 | 3.80e-01 | 100.0% | 25.1% |
| 3dboB00 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.67 | 57.0 | 4.55e-01 | 98.4% | 46.8% |
| 3tndA00 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.65 | 57.0 | 4.53e-01 | 100.0% | 50.8% |
| 2qpqA01 | 3.40.190.150 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Bordetella uptake gene, domain 1 | 0.57 | 47.0 | 3.57e-01 | 100.0% | 62.2% |
| 4e19A00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.56 | 47.0 | 3.84e-01 | 100.0% | 78.9% |
| 3rhzA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.56 | 40.0 | 3.02e-01 | 100.0% | 29.9% |
| 5lqdD01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.56 | 44.0 | 3.10e-01 | 91.9% | 42.1% |
| 5k7fA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.56 | 45.0 | 3.72e-01 | 100.0% | 71.0% |
| 7zvjA01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.56 | 42.0 | 2.91e-01 | 98.4% | 21.7% |
| 3ozxA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 44.0 | 3.05e-01 | 100.0% | 39.7% |
| 1ui0A00 | 3.40.470.10 | Alpha Beta › 3-Layer(aba) Sandwich › Uracil-DNA Glycosylase, subunit E › Uracil-DNA glycosylase-like domain | 0.53 | 46.0 | 3.28e-01 | 98.4% | 40.6% |
| 1hyuA02 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.52 | 34.0 | 3.08e-01 | 77.4% | 43.2% |
| 1t5bB00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.51 | 42.0 | 3.06e-01 | 95.2% | 57.1% |
| 4xr9B01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 42.0 | 3.01e-01 | 98.4% | 29.4% |
| 3o3mB01 | 1.20.1270.370 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.50 | 38.0 | 3.36e-01 | 87.1% | 71.8% |
| 1zbmA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.50 | 41.0 | 3.12e-01 | 98.4% | 87.8% |
| 4n13A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.50 | 36.0 | 3.05e-01 | 79.0% | 95.7% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3239615 | 2006.1.4.10 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN_4 | 0.90 | 83.0 | 6.05e-01 | 100.0% | 40.6% |
| 3742608 | 2006.1.4.10 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN_4 | 0.89 | 82.0 | 6.01e-01 | 100.0% | 46.7% |
| 4222859 | 2006.1.4.10 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN_4 | 0.89 | 81.0 | 5.93e-01 | 100.0% | 40.7% |
| 3489250 | 2006.1.4.10 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN_4 | 0.89 | 80.0 | 5.47e-01 | 100.0% | 31.6% |
| 3890777 | 2006.1.4.10 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN_4 | 0.88 | 79.0 | 5.61e-01 | 100.0% | 35.5% |
| 3395967 | 2006.1.4.10 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN_4 | 0.87 | 77.0 | 5.50e-01 | 100.0% | 35.3% |
| 3955347 | 2006.1.4.10 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN_4 | 0.86 | 78.0 | 5.86e-01 | 98.4% | 43.6% |
| 3510927 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.84 | 76.0 | 5.49e-01 | 100.0% | 38.1% |
| 4994951 | 2006.1.4.13 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN_9 | 0.84 | 78.0 | 5.97e-01 | 100.0% | 53.1% |
| 3638707 | 2006.1.4.10 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN_4 | 0.84 | 77.0 | 5.52e-01 | 100.0% | 38.8% |
| 5055988 | 2006.1.4.13 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN_9 | 0.83 | 76.0 | 6.04e-01 | 100.0% | 57.5% |
| 4998217 | 2006.1.4.13 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN_9 | 0.82 | 75.0 | 5.83e-01 | 100.0% | 56.8% |
| 4527737 | 7524.1.1.0 ↗ | a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like | 0.81 | 75.0 | 4.97e-01 | 100.0% | 29.8% |
| 3594063 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.81 | 74.0 | 5.02e-01 | 100.0% | 33.7% |
| 4991695 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.81 | 71.0 | 5.78e-01 | 98.4% | 53.6% |
| 4927972 | 2006.1.4.13 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN_9 | 0.78 | 72.0 | 5.55e-01 | 100.0% | 54.3% |
| 5045345 | 2006.1.4.13 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN_9 | 0.78 | 69.0 | 5.38e-01 | 98.4% | 53.8% |
| 3953003 | 2002.3.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase | 0.78 | 69.0 | 4.30e-01 | 100.0% | 30.1% |
| 4935310 | 2006.1.4.13 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN_9 | 0.76 | 67.0 | 5.27e-01 | 98.4% | 52.3% |
| 3288380 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.74 | 65.0 | 5.02e-01 | 100.0% | 49.3% |
| 5031031 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.73 | 63.0 | 4.95e-01 | 98.4% | 52.6% |
| 4951083 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.72 | 61.0 | 4.84e-01 | 96.8% | 51.5% |
| 5050524 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.71 | 62.0 | 4.81e-01 | 98.4% | 48.6% |
| 4967492 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.70 | 61.0 | 4.83e-01 | 98.4% | 52.3% |
| 3887739 | 2006.1.4.30 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN_TASOR | 0.70 | 58.0 | 4.53e-01 | 98.4% | 48.7% |
| 3742998 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.69 | 58.0 | 4.24e-01 | 100.0% | 33.9% |
| 3954445 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.69 | 60.0 | 5.06e-01 | 98.4% | 60.0% |
| 4966318 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.68 | 57.0 | 4.47e-01 | 95.2% | 51.9% |
| 5075633 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.67 | 58.0 | 4.64e-01 | 98.4% | 48.4% |
| 4983576 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.67 | 56.0 | 4.50e-01 | 96.8% | 55.4% |
| 5032544 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.67 | 58.0 | 4.57e-01 | 100.0% | 51.1% |
| 3709241 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.61 | 53.0 | 3.89e-01 | 100.0% | 71.4% |
| 4260261 | 2005.1.1.111 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › GMP_synt_C | 0.58 | 43.0 | 3.06e-01 | 80.6% | 51.8% |
| 3466588 | 2004.1.1.33 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C,RecQ_Zn_bind | 0.56 | 47.0 | 3.33e-01 | 100.0% | 62.3% |
| 3983508 | 7515.1.1.8 ↗ | a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like › Metalloenzyme | 0.56 | 47.0 | 3.14e-01 | 100.0% | 41.4% |
| 3337681 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.55 | 42.0 | 4.14e-01 | 88.7% | 95.7% |
| 5077931 | 7515.1.1.6 ↗ | a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like › Phosphodiest | 0.53 | 45.0 | 2.82e-01 | 98.4% | 43.9% |
| 2050701 | 2007.1.14.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like | 0.53 | 44.0 | 3.42e-01 | 98.4% | 61.2% |
| 5022647 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.52 | 42.0 | 3.34e-01 | 98.4% | 58.2% |
| 4953399 | 2007.1.4.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Phosphofructokinase N-terminal domain › NAD_kinase | 0.51 | 42.0 | 3.32e-01 | 98.4% | 54.0% |
| 5077699 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.51 | 42.0 | 3.01e-01 | 100.0% | 42.6% |