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OM971648.1__UQJ95285.1__IANJMKHF_00380__00379
Bact-VirOM971648.1__UQJ95285.1__IANJMKHF_00380__00379
Identity
- Accession:
- OM971648 ↗
- Kingdom:
- phage
Quality
86.8
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Slopekvirus›
Klebsiella_phage_CPRSA
TaxID: 2935722
Cluster
View cluster (10 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 34-138
Domain cluster:
rep: SRR1747018_scaffold_0_prodigal-single.1__X__X__00097__D226-322
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF09511.16 best | RNA_lig_T4_1 | 32.0 | 1.50e-07 | 98.1% | 46.3% |
D2
medium
residues 5-31_141-175
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2rcnA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 32.0 | 3.28e-01 | 93.5% | 55.7% |
| 4yo1A03 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.56 | 45.0 | 4.07e-01 | 96.8% | 96.8% |
| 7w6yA02 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.55 | 43.0 | 4.06e-01 | 100.0% | 69.1% |
| 6o5cA02 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.55 | 36.0 | 3.42e-01 | 90.3% | 55.3% |
| 1bdp001 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.54 | 38.0 | 2.67e-01 | 100.0% | 23.7% |
| 3orjA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 48.0 | 4.32e-01 | 100.0% | 91.8% |
| 3fysA02 | 3.30.1180.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › | 0.53 | 36.0 | 2.93e-01 | 71.0% | 90.7% |
| 5e7gA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 45.0 | 4.09e-01 | 100.0% | 97.8% |
| 2zpmA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.52 | 43.0 | 3.95e-01 | 96.8% | 74.4% |
| 6e55A01 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.52 | 35.0 | 3.35e-01 | 90.3% | 59.5% |
| 3a7rA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.52 | 39.0 | 2.77e-01 | 90.3% | 83.1% |
| 7vt4A01 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.50 | 42.0 | 3.42e-01 | 98.4% | 96.9% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4881570 | 206.1.3.24 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RNA_lig_T4_1 | 0.67 | 60.0 | 3.95e-01 | 100.0% | 65.6% |
| 3203300 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.58 | 45.0 | 3.75e-01 | 87.1% | 76.5% |
| 4400398 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.54 | 37.0 | 2.71e-01 | 71.0% | 56.1% |
| 4932811 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.52 | 43.0 | 3.59e-01 | 96.8% | 68.3% |
| 5065808 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.51 | 41.0 | 3.89e-01 | 96.8% | 73.8% |
| 5075948 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.51 | 41.0 | 3.55e-01 | 96.8% | 54.5% |
D3
medium
residues 177-210