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OM971649.1__UQJ95406.1__ALHIDCOG_00018__00018

Bact-Vir

OM971649.1__UQJ95406.1__ALHIDCOG_00018__00018

Identity

Accession:
OM971649 ↗
Kingdom:
phage

Quality

68.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Straboviridae› Slopekvirus› Klebsiella_phage_CPRSB

TaxID: 2935723

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-52
PDB
Domain cluster: representative
CATH (42)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3hrgA02 3.30.420.260 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Protein of unknown function DUF3822, C-terminal domain 0.68 58.0 4.55e-01 100.0% 48.2%
1hdhA02 3.30.1120.10 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.65 42.0 3.70e-01 76.5% 44.2%
2qggA02 2.30.30.240 Mainly Beta › Roll › SH3 type barrels. › PRC-barrel domain 0.65 46.0 3.96e-01 76.5% 59.0%
5umsA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.64 55.0 4.46e-01 100.0% 52.0%
2wweA01 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.64 48.0 3.94e-01 86.3% 77.9%
2ffgA00 3.30.720.20 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Protein of unknown function DUF1797 0.64 49.0 4.30e-01 90.2% 55.0%
1mhxA00 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.63 48.0 4.55e-01 86.3% 72.3%
2yx6D01 3.30.420.130 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Dinitrogenase iron-molybdenum cofactor biosynthesis domain 0.63 55.0 4.44e-01 100.0% 61.8%
2ljuA01 3.30.160.190 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › atu1810 like domain 0.63 54.0 4.80e-01 100.0% 96.0%
3h1qA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.63 52.0 4.15e-01 100.0% 78.3%
4h0pA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.63 53.0 3.60e-01 100.0% 44.1%
1h10A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 48.0 3.81e-01 90.2% 43.6%
4jn7A01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.62 48.0 3.79e-01 90.2% 41.2%
2kdsA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.61 45.0 3.83e-01 100.0% 47.7%
2lg1A02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 46.0 3.72e-01 90.2% 43.5%
4k2xB02 3.30.70.2450 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 45.0 3.90e-01 82.4% 85.4%
2ra8A01 2.20.140.10 Mainly Beta › Single Sheet › q64v53_bacfr protein fold › WGR domain 0.60 49.0 4.43e-01 96.1% 71.6%
1o97C00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.59 42.0 2.75e-01 98.0% 15.9%
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 39.0 3.71e-01 98.0% 56.2%
4ikbA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.59 46.0 3.56e-01 92.2% 78.3%
3f6gA02 3.30.160.340 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.59 45.0 4.28e-01 86.3% 93.7%
7t8tA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 46.0 3.49e-01 90.2% 50.4%
3oblA00 2.40.128.450 Mainly Beta › Beta Barrel › Lipocalin › 0.58 43.0 3.24e-01 82.4% 34.1%
2jhnA01 3.30.310.20 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › DNA-3-methyladenine glycosylase AlkA, N-terminal domain 0.58 40.0 3.21e-01 74.5% 74.3%
3a7rA02 3.30.390.50 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain 0.58 46.0 4.04e-01 100.0% 79.8%
7x3hA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.57 48.0 3.79e-01 100.0% 79.3%
1ntyA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 44.0 3.44e-01 90.2% 39.5%
4je3B00 3.10.20.720 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.57 42.0 3.84e-01 86.3% 68.8%
3hvnA01 3.90.840.10 Alpha Beta › Alpha-Beta Complex › HIV-1 Reverse Transcriptase; Chain A, domain 3 › Thiol-activated cytolysin superfamily/Thiol-activated cytolysin, alpha-beta domain 0.57 45.0 3.27e-01 96.1% 74.4%
4bgjA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.56 46.0 3.52e-01 92.2% 82.2%
4r2qA00 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.56 35.0 2.99e-01 74.5% 35.2%
4v1ag00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.56 41.0 3.16e-01 88.2% 53.4%
1ry6A00 3.40.850.10 Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain 0.55 42.0 2.69e-01 90.2% 27.0%
2zgyA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.54 43.0 3.35e-01 100.0% 80.0%
2g8yA02 3.30.1370.60 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Malate/L-lactate/L-sulpholactate dehydrogenase, NADPH binding domain 0.54 42.0 2.84e-01 90.2% 23.9%
2rgnB02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 44.0 3.43e-01 96.1% 39.8%
2h7fX02 3.90.15.10 Alpha Beta › Alpha-Beta Complex › Topoisomerase I; Chain A, domain 3 › Topoisomerase I; Chain A, domain 3 0.53 42.0 2.73e-01 88.2% 22.4%
1ykdB02 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.53 44.0 3.13e-01 100.0% 72.2%
1v89A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 40.0 3.25e-01 90.2% 47.5%
4e1pA00 3.30.60.230 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › Lsr2, dimerisation domain 0.53 36.0 3.61e-01 82.4% 70.9%
5jk0B01 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.52 42.0 2.95e-01 90.2% 34.1%
7tuvA01 2.40.50.690 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.51 41.0 3.52e-01 96.1% 83.2%
ECOD (65)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4196676 2484.1.1.174 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH 0.71 62.0 4.97e-01 100.0% 52.0%
4675215 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.70 61.0 4.82e-01 100.0% 49.5%
4043193 2484.1.1.37 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase 0.69 57.0 4.53e-01 100.0% 44.5%
4213415 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.69 59.0 4.83e-01 100.0% 54.0%
4246147 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.68 59.0 4.88e-01 100.0% 55.8%
4985600 896.1.1.0 ↗ a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related 0.68 58.0 5.06e-01 100.0% 65.0%
3506941 391.1.1.0 ↗ few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module 0.68 54.0 4.23e-01 100.0% 40.4%
4574547 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.68 58.0 4.67e-01 100.0% 50.5%
3211347 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.67 54.0 4.18e-01 92.2% 42.5%
4938125 896.1.1.0 ↗ a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related 0.66 52.0 4.45e-01 88.2% 68.2%
4294687 2484.1.1.174 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH 0.66 56.0 4.40e-01 100.0% 80.9%
3943930 4325.1.1.0 ↗ mixed a+b and a/b › YegP-like › YegP-like › YegP-like 0.64 48.0 4.86e-01 86.3% 86.0%
4955671 7089.1.1.0 ↗ a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD 0.62 48.0 4.27e-01 90.2% 67.5%
4411025 284.1.3.3 ↗ a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › DUF4346 0.62 51.0 4.57e-01 100.0% 78.8%
3289877 394.1.1.1 ↗ few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 0.62 43.0 4.36e-01 72.5% 84.0%
3214705 277.1.1.0 ↗ a+b two layers › PX domain › PX domain › PX domain 0.62 51.0 3.85e-01 90.2% 69.2%
3873956 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.62 50.0 3.86e-01 92.2% 39.2%
4944430 244.3.1.0 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU 0.62 50.0 4.52e-01 100.0% 80.0%
3379810 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.61 47.0 4.55e-01 88.2% 80.0%
5047317 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.61 52.0 4.48e-01 100.0% 77.6%
3865191 220.1.1.61 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C_FAK1 0.61 49.0 4.06e-01 100.0% 50.9%
5055184 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.61 46.0 3.99e-01 86.3% 60.0%
3272624 4210.1.1.1 ↗ a+b two layers › WGR domain › WGR domain › WGR domain › WGR 0.60 49.0 3.72e-01 94.1% 53.8%
3908855 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.60 46.0 4.56e-01 88.2% 81.8%
3266702 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 47.0 4.06e-01 96.1% 55.9%
3321360 4210.1.1.1 ↗ a+b two layers › WGR domain › WGR domain › WGR domain › WGR 0.59 47.0 4.28e-01 94.1% 92.0%
3371492 220.1.1.227 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF3119 0.59 49.0 4.15e-01 100.0% 53.7%
3238035 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.59 49.0 4.96e-01 100.0% 94.0%
3633079 220.1.1.194 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_2nd_LRR 0.59 49.0 3.54e-01 100.0% 34.1%
3387142 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.59 49.0 3.44e-01 100.0% 30.0%
3398310 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.59 49.0 3.83e-01 96.1% 48.7%
3183690 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 46.0 3.40e-01 90.2% 36.7%
4983274 868.1.1.1 ↗ a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH 0.59 49.0 3.49e-01 100.0% 32.0%
3316389 4.8.1.44 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF3119 0.59 48.0 3.57e-01 96.1% 35.7%
3228242 4210.1.1.1 ↗ a+b two layers › WGR domain › WGR domain › WGR domain › WGR 0.58 46.0 3.89e-01 96.1% 68.0%
3627817 220.1.1.47 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_16 0.58 47.0 2.94e-01 90.2% 16.6%
4382988 2484.1.1.174 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH 0.58 47.0 3.79e-01 100.0% 49.2%
3938714 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.58 45.0 3.50e-01 90.2% 38.4%
3585491 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.58 44.0 2.61e-01 84.3% 13.2%
3542914 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.57 43.0 3.42e-01 86.3% 65.0%
5049975 1075.1.1.0 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain 0.57 39.0 2.45e-01 70.6% 32.7%
3670473 220.1.1.227 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF3119 0.57 47.0 3.58e-01 100.0% 37.1%
4200272 218.1.1.0 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like 0.57 43.0 3.76e-01 90.2% 51.1%
3250882 220.1.1.199 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_NISCH_C 0.57 47.0 3.52e-01 100.0% 41.7%
3501861 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.56 44.0 3.58e-01 90.2% 43.8%
3719687 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 47.0 4.24e-01 100.0% 70.7%
5035818 2484.1.1.174 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH 0.56 45.0 3.64e-01 100.0% 82.6%
3383138 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.54 44.0 3.87e-01 92.2% 65.4%
3629974 220.1.1.52 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › SNX17_FERM_C 0.54 41.0 3.40e-01 96.1% 44.0%
3514906 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.54 38.0 2.70e-01 76.5% 83.2%
3741285 292.2.1.1 ↗ a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box 0.54 43.0 3.56e-01 100.0% 48.4%
3254541 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.54 44.0 3.57e-01 100.0% 47.3%
3575385 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 41.0 3.37e-01 96.1% 44.0%
3597563 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 47.0 3.55e-01 100.0% 43.2%
3476563 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 41.0 3.27e-01 90.2% 97.5%
3629171 220.1.1.66 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH 0.53 40.0 3.09e-01 90.2% 32.4%
3379969 2485.1.1.0 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.53 36.0 3.11e-01 76.5% 82.0%
5036173 2003.1.5.66 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.53 40.0 2.76e-01 88.2% 67.1%
4028996 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 43.0 3.24e-01 100.0% 34.5%
4999286 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.52 39.0 2.69e-01 100.0% 23.3%
3386551 2003.1.5.79 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23 0.52 42.0 2.78e-01 92.2% 25.5%
4024504 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 41.0 3.48e-01 100.0% 50.0%
4978090 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.51 37.0 2.53e-01 100.0% 19.5%
4569125 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.50 38.0 2.51e-01 84.3% 53.8%
3255946 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.50 36.0 3.29e-01 88.2% 53.8%