←Back to structures
OM971649.1__UQJ95447.1__ALHIDCOG_00059__00059
Bact-VirOM971649.1__UQJ95447.1__ALHIDCOG_00059__00059
Identity
- Accession:
- OM971649 ↗
- Kingdom:
- phage
Quality
89.8
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Slopekvirus›
Klebsiella_phage_CPRSB
TaxID: 2935723
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-104
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04095.23 best | NAPRTase | 33.9 | 4.00e-08 | 47.9% | 16.7% |
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2g95B02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.90 | 76.0 | 5.35e-01 | 93.8% | 33.2% |
| 2pejA00 | 1.10.1200.210 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Chaperonin-like RbcX | 0.65 | 39.0 | 3.76e-01 | 77.1% | 53.2% |
| 2wdqD00 | 1.20.1300.10 | Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit | 0.64 | 39.0 | 3.78e-01 | 85.4% | 54.3% |
| 2ykgA03 | 1.20.1320.30 | Mainly Alpha › Up-down Bundle › phosphoenolpyruvate carboxylase, domain 3 › | 0.64 | 41.0 | 3.73e-01 | 76.0% | 47.4% |
| 3r0xA02 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.62 | 48.0 | 4.42e-01 | 82.3% | 74.0% |
| 2y2wC02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.62 | 54.0 | 3.66e-01 | 97.9% | 35.8% |
| 3aqbB00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.59 | 45.0 | 3.16e-01 | 81.2% | 52.6% |
| 4rm7A01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.58 | 43.0 | 4.02e-01 | 78.1% | 76.2% |
| 2e8gA01 | 1.20.1440.150 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.56 | 35.0 | 3.24e-01 | 90.6% | 48.4% |
| 1dkxA02 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.56 | 39.0 | 4.23e-01 | 78.1% | 87.5% |
| 1wa8A00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.54 | 35.0 | 3.49e-01 | 89.6% | 63.6% |
| 2n00A00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.54 | 31.0 | 3.19e-01 | 94.8% | 56.8% |
| 3lbxB01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 38.0 | 3.72e-01 | 76.0% | 86.9% |
| 1q8cA00 | 1.10.940.10 | Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like | 0.52 | 37.0 | 3.37e-01 | 75.0% | 95.5% |
| 4q5qB00 | 1.20.1050.130 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.52 | 45.0 | 3.68e-01 | 100.0% | 53.2% |
| 1cunA01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 37.0 | 3.65e-01 | 75.0% | 90.2% |
| 2etdA00 | 1.20.1440.20 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › LemA-like domain | 0.51 | 44.0 | 3.85e-01 | 93.8% | 95.0% |
| 1jqxA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.51 | 43.0 | 3.13e-01 | 92.7% | 41.6% |
| 4b7hA03 | 1.20.1370.60 | Mainly Alpha › Up-down Bundle › Hemocyanin, N-terminal domain › | 0.51 | 37.0 | 3.49e-01 | 77.1% | 69.6% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3496197 | 2002.4.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › Nicotinate/Quinolinate PRTase C-terminal domain-like › Nicotinate/Quinolinate PRTase C-terminal domain-like | 0.94 | 73.0 | 4.95e-01 | 88.5% | 26.1% |
| 3898322 | 2002.4.1.1 ↗ | a/b barrels › TIM beta/alpha-barrel › Nicotinate/Quinolinate PRTase C-terminal domain-like › Nicotinate/Quinolinate PRTase C-terminal domain-like › NAPRTase | 0.92 | 74.0 | 4.87e-01 | 89.6% | 23.9% |
| 1778179 | 2002.4.1.1 ↗ | a/b barrels › TIM beta/alpha-barrel › Nicotinate/Quinolinate PRTase C-terminal domain-like › Nicotinate/Quinolinate PRTase C-terminal domain-like › NAPRTase | 0.91 | 76.0 | 5.02e-01 | 92.7% | 25.1% |
| 4954704 | 2002.1.1.128 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › NAPRTase | 0.91 | 70.0 | 4.80e-01 | 87.5% | 26.6% |
| 4888125 | 2002.4.1.1 ↗ | a/b barrels › TIM beta/alpha-barrel › Nicotinate/Quinolinate PRTase C-terminal domain-like › Nicotinate/Quinolinate PRTase C-terminal domain-like › NAPRTase | 0.90 | 68.0 | 4.59e-01 | 84.4% | 24.5% |
| 5054557 | 604.3.1.0 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain | 0.71 | 51.0 | 5.29e-01 | 75.0% | 94.4% |
| 4114693 | 5041.1.1.28 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › PF26135 | 0.67 | 44.0 | 5.13e-01 | 89.6% | 92.9% |
| 3602365 | 3236.1.1.3 ↗ | alpha complex topology › Cation-proton antiporter › Cation-proton antiporter (CPA) › Cation-proton antiporter (CPA) › Mem_trans | 0.64 | 56.0 | 3.94e-01 | 96.9% | 71.0% |
| 3760145 | 106.1.1.8 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like › HisK-N-like | 0.59 | 42.0 | 3.68e-01 | 75.0% | 82.0% |
| 4940986 | 5058.1.1.0 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region | 0.56 | 41.0 | 4.20e-01 | 80.2% | 78.9% |
| 3480773 | 109.4.1.471 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › GCFC | 0.54 | 46.0 | 3.61e-01 | 100.0% | 61.3% |
| 4023112 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.52 | 37.0 | 3.43e-01 | 74.0% | 84.0% |
| 5032186 | 150.5.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like | 0.52 | 36.0 | 3.96e-01 | 89.6% | 92.0% |
| 3521044 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.51 | 37.0 | 3.60e-01 | 76.0% | 88.2% |
| 4575680 | 589.1.2.1 ↗ | alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › TF C-terminus (Pfam 05698) › Trigger_C | 0.51 | 40.0 | 3.26e-01 | 85.4% | 57.8% |
D2
medium
residues 115-147
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3q13A01 | 2.60.40.2130 | Mainly Beta › Sandwich › Immunoglobulin-like › F-spondin domain | 0.50 | 39.0 | 2.54e-01 | 97.0% | 25.1% |