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OM971649.1__UQJ95784.1__ALHIDCOG_00397__00396
Bact-VirOM971649.1__UQJ95784.1__ALHIDCOG_00397__00396
Identity
- Accession:
- OM971649 ↗
- Kingdom:
- phage
Quality
71.0
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Slopekvirus›
Klebsiella_phage_CPRSB
TaxID: 2935723
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-53
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4a1fB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.69 | 61.0 | 3.74e-01 | 100.0% | 16.9% |
| 1nv8B01 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.67 | 51.0 | 4.66e-01 | 96.2% | 62.0% |
| 3mxnA02 | 6.10.140.770 | Special › Helix non-globular › Helix Hairpins › | 0.60 | 43.0 | 4.29e-01 | 77.4% | 90.9% |
| 4fvmA04 | 6.10.10.100 | Special › Helix non-globular › Helicase, Ruva Protein; domain 3 › | 0.59 | 39.0 | 4.18e-01 | 77.4% | 80.4% |
| 2wfpA03 | 1.10.441.10 | Mainly Alpha › Orthogonal Bundle › Phosphomannose Isomerase; domain 2 › Phosphomannose Isomerase, domain 2 | 0.59 | 48.0 | 3.84e-01 | 94.3% | 46.9% |
| 3crvA03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 40.0 | 2.76e-01 | 73.6% | 47.2% |
| 2mr7A00 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.58 | 46.0 | 3.95e-01 | 94.3% | 52.7% |
| 3pxpA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.58 | 39.0 | 3.35e-01 | 71.7% | 55.9% |
| 7kz9A02 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.57 | 44.0 | 3.03e-01 | 88.7% | 33.7% |
| 2jaeA03 | 1.20.1440.240 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.57 | 38.0 | 3.12e-01 | 73.6% | 36.6% |
| 4qclA03 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.55 | 42.0 | 2.76e-01 | 86.8% | 83.8% |
| 2fh0A00 | 1.10.8.140 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › PDCD5, DNA-binding domain | 0.55 | 38.0 | 3.28e-01 | 71.7% | 50.6% |
| 3ztgA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.55 | 38.0 | 3.31e-01 | 75.5% | 80.4% |
| 5grqA00 | 1.10.8.810 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Daxx helical bundle domain | 0.53 | 40.0 | 3.40e-01 | 81.1% | 86.7% |
| 2damA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.53 | 38.0 | 3.61e-01 | 79.2% | 79.1% |
| 2xgcA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.52 | 38.0 | 2.99e-01 | 83.0% | 66.4% |
| 2v57A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.52 | 38.0 | 2.75e-01 | 81.1% | 31.0% |
| 4eqyA02 | 1.20.1180.10 | Mainly Alpha › Up-down Bundle › Udp N-acetylglucosamine O-acyltransferase; Domain 2 › Udp N-acetylglucosamine O-acyltransferase, C-terminal domain | 0.51 | 40.0 | 3.72e-01 | 86.8% | 75.7% |
| 1fi4A02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.51 | 45.0 | 3.05e-01 | 100.0% | 83.3% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3081874 | 2004.1.1.107 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DnaB_C | 0.94 | 88.0 | 5.35e-01 | 100.0% | 27.1% |
| 3962909 | 2004.1.1.107 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DnaB_C | 0.73 | 64.0 | 3.92e-01 | 100.0% | 16.2% |
| 4001430 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.72 | 53.0 | 5.02e-01 | 81.1% | 69.2% |
| 4055517 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.72 | 64.0 | 3.66e-01 | 100.0% | 10.9% |
| 4291905 | 2004.1.1.107 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DnaB_C | 0.71 | 64.0 | 3.95e-01 | 100.0% | 17.7% |
| 4928759 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.59 | 39.0 | 4.24e-01 | 71.7% | 80.0% |
| 4982623 | 4095.1.1.1 ↗ | alpha bundles › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › DNA_ligase_A_N | 0.59 | 42.0 | 3.68e-01 | 75.5% | 52.5% |
| 5031544 | 4095.1.1.0 ↗ | alpha bundles › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain | 0.59 | 41.0 | 3.34e-01 | 71.7% | 43.0% |
| 4332288 | 4095.1.1.1 ↗ | alpha bundles › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › DNA_ligase_A_N | 0.58 | 43.0 | 3.41e-01 | 79.2% | 46.4% |
| 3832662 | 185.1.1.4 ↗ | alpha superhelices › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin › Prolamin_like | 0.55 | 41.0 | 3.76e-01 | 81.1% | 98.6% |
| 4880449 | 4095.1.1.1 ↗ | alpha bundles › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › DNA_ligase_A_N | 0.55 | 44.0 | 3.69e-01 | 86.8% | 51.1% |
| 5060247 | 4095.1.1.1 ↗ | alpha bundles › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › DNA_ligase_A_N | 0.54 | 44.0 | 3.01e-01 | 94.3% | 47.0% |
| 5046138 | 4095.1.1.1 ↗ | alpha bundles › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › DNA_ligase_A_N | 0.54 | 44.0 | 2.99e-01 | 94.3% | 30.9% |
| 3808441 | 4095.1.1.1 ↗ | alpha bundles › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › DNA_ligase_A_N | 0.52 | 36.0 | 2.70e-01 | 73.6% | 33.1% |
| 3805872 | 4095.1.1.1 ↗ | alpha bundles › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › DNA_ligase_A_N | 0.52 | 35.0 | 2.72e-01 | 77.4% | 30.4% |
D2
medium
residues 54-121