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OM982621.1__UOL48622.1__X__00026

Bact-Vir

OM982621.1__UOL48622.1__X__00026

Identity

Accession:
OM982621 ↗
Kingdom:
phage

Quality

91.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 12-144
PDB
D2 high residues 150-210
PDB
Domain cluster: representative
CATH (41)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3id6A01 3.30.420.220 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.70 63.0 5.22e-01 100.0% 85.8%
7mi4A02 3.100.10.20 Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain 0.68 47.0 4.45e-01 80.3% 60.8%
2w40A01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.67 59.0 3.90e-01 100.0% 99.6%
1w97L02 3.30.420.370 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › GspL cytoplasmic domain, C-terminal subdomain 0.67 53.0 5.02e-01 88.5% 93.3%
1nmnA00 3.30.420.140 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › YqgF/RNase H-like domain 0.66 56.0 4.60e-01 100.0% 95.8%
2f9wA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.65 56.0 4.44e-01 98.4% 97.7%
8d3lA01 3.100.10.20 Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain 0.65 46.0 4.06e-01 80.3% 51.1%
4bc3A01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.63 53.0 3.47e-01 100.0% 99.4%
3k6qA02 3.30.160.620 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.63 44.0 3.89e-01 73.8% 97.8%
1k8kA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.63 54.0 4.27e-01 100.0% 80.3%
3h09B02 2.160.20.20 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.62 47.0 2.79e-01 82.0% 15.5%
4fo0A01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.62 53.0 3.98e-01 100.0% 75.9%
4phtY02 3.30.420.370 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › GspL cytoplasmic domain, C-terminal subdomain 0.62 49.0 4.92e-01 88.5% 93.5%
5tkwA02 3.30.420.370 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › GspL cytoplasmic domain, C-terminal subdomain 0.62 51.0 5.07e-01 95.1% 92.4%
1vh7A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.61 50.0 3.31e-01 90.2% 50.0%
1jceA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.61 51.0 3.99e-01 100.0% 96.1%
3netB02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.60 50.0 4.35e-01 95.1% 87.8%
2p6rA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.59 48.0 3.52e-01 96.7% 99.5%
3tdnA00 3.40.50.12600 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.59 48.0 3.92e-01 91.8% 83.5%
2b3zA02 3.40.430.10 Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A 0.59 45.0 3.12e-01 85.2% 57.3%
4l69A02 3.40.1280.10 Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain 0.59 48.0 3.59e-01 96.7% 92.0%
4v0bA00 3.30.720.210 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.58 41.0 4.07e-01 80.3% 73.0%
7cr6D01 3.100.10.20 Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain 0.58 41.0 3.76e-01 80.3% 56.1%
4w8kA01 3.100.10.20 Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain 0.57 39.0 3.48e-01 77.0% 47.3%
3eheA02 3.90.25.10 Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 0.57 38.0 3.26e-01 77.0% 43.8%
1nxzB02 3.40.1280.10 Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain 0.57 47.0 3.53e-01 98.4% 92.5%
4la1A01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.57 42.0 3.67e-01 100.0% 51.0%
2obbA00 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.56 42.0 3.46e-01 100.0% 42.1%
4gj1A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.56 47.0 3.29e-01 100.0% 81.7%
3s98A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 40.0 3.69e-01 78.7% 98.8%
1t1vA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.55 41.0 3.66e-01 100.0% 54.8%
1yr1A00 3.40.50.10960 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.55 44.0 3.63e-01 91.8% 79.8%
7d27A02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.54 46.0 3.20e-01 100.0% 87.4%
4c6sA00 3.40.50.10140 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Toll/interleukin-1 receptor homology (TIR) domain 0.54 45.0 3.59e-01 98.4% 95.1%
6mflA02 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.53 41.0 3.59e-01 90.2% 94.1%
3mz2A00 3.20.20.190 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase 0.52 44.0 2.91e-01 100.0% 70.9%
2lleA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.52 40.0 2.87e-01 91.8% 62.4%
3eeqA01 3.40.50.11220 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.52 44.0 3.66e-01 100.0% 61.7%
5b51A01 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.52 42.0 3.42e-01 96.7% 87.1%
2dxqA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.52 40.0 3.07e-01 85.2% 85.7%
4hn9A01 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.51 42.0 3.44e-01 100.0% 85.4%
ECOD (65)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5044314 3203.1.1.0 a+b two layers › Putative oxidoreductase › Putative oxidoreductase › Putative oxidoreductase 0.77 57.0 4.99e-01 78.7% 100.0%
4946976 3407.1.1.5 mixed a+b and a/b › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain › Nop 0.75 67.0 5.06e-01 100.0% 67.6%
5000285 3407.1.1.2 mixed a+b and a/b › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain › Nop5_56-rel_N_Arc 0.74 67.0 5.12e-01 100.0% 71.1%
5043198 3407.1.1.2 mixed a+b and a/b › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain › Nop5_56-rel_N_Arc 0.73 65.0 5.26e-01 100.0% 77.4%
5039434 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.73 55.0 3.30e-01 82.0% 16.7%
4993724 3407.1.1.2 mixed a+b and a/b › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain › Nop5_56-rel_N_Arc 0.73 65.0 5.04e-01 100.0% 70.0%
3635316 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.72 53.0 4.96e-01 78.7% 73.3%
4990373 3407.1.1.2 mixed a+b and a/b › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain › Nop5_56-rel_N_Arc 0.72 65.0 5.03e-01 100.0% 72.3%
5031945 3407.1.1.2 mixed a+b and a/b › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain › Nop5_56-rel_N_Arc 0.72 63.0 4.92e-01 100.0% 70.4%
3396736 65.1.1.0 beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases 0.72 52.0 5.13e-01 77.0% 93.8%
4982711 3407.1.1.2 mixed a+b and a/b › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain › Nop5_56-rel_N_Arc 0.72 63.0 4.97e-01 100.0% 72.3%
5013411 3407.1.1.2 mixed a+b and a/b › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain › Nop5_56-rel_N_Arc 0.72 63.0 5.08e-01 100.0% 75.8%
4942756 3407.1.1.2 mixed a+b and a/b › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain › Nop5_56-rel_N_Arc 0.72 64.0 5.11e-01 100.0% 72.5%
4971482 3407.1.1.2 mixed a+b and a/b › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain › Nop5_56-rel_N_Arc 0.71 64.0 4.88e-01 100.0% 67.1%
3401112 65.1.1.0 beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases 0.71 52.0 5.24e-01 77.0% 98.3%
4953660 3407.1.1.2 mixed a+b and a/b › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain › Nop5_56-rel_N_Arc 0.71 64.0 5.08e-01 100.0% 80.0%
4956705 3407.1.1.2 mixed a+b and a/b › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain › Nop5_56-rel_N_Arc 0.71 64.0 5.02e-01 100.0% 70.4%
5075934 3407.1.1.2 mixed a+b and a/b › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain › Nop5_56-rel_N_Arc 0.71 62.0 4.84e-01 100.0% 70.4%
5051849 3407.1.1.2 mixed a+b and a/b › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain › Nop5_56-rel_N_Arc 0.71 61.0 4.80e-01 100.0% 70.4%
5023680 3407.1.1.2 mixed a+b and a/b › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain › Nop5_56-rel_N_Arc 0.71 64.0 4.84e-01 100.0% 66.4%
4927504 3407.1.1.0 mixed a+b and a/b › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain 0.70 59.0 4.71e-01 95.1% 70.4%
5058178 3407.1.1.2 mixed a+b and a/b › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain › Nop5_56-rel_N_Arc 0.70 61.0 5.00e-01 100.0% 71.3%
1208360 3407.1.1.2 mixed a+b and a/b › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain › Nop5_56-rel_N_Arc 0.70 62.0 4.78e-01 98.4% 68.2%
4945183 3407.1.1.5 mixed a+b and a/b › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain › Nop 0.70 61.0 4.82e-01 100.0% 70.0%
5071166 3407.1.1.2 mixed a+b and a/b › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain › Nop5_56-rel_N_Arc 0.70 61.0 4.80e-01 100.0% 72.3%
4650684 3239.1.1.1 alpha complex topology › Cas1 › Cas1 › Cas1 › Cas_Cas1 0.70 50.0 3.10e-01 80.3% 13.9%
4979642 3407.1.1.0 mixed a+b and a/b › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain 0.69 60.0 5.15e-01 100.0% 96.0%
4986877 3407.1.1.2 mixed a+b and a/b › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain › Nop5_56-rel_N_Arc 0.68 61.0 5.08e-01 100.0% 66.7%
4977093 3407.1.1.2 mixed a+b and a/b › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain › Nop5_56-rel_N_Arc 0.68 59.0 4.67e-01 100.0% 72.3%
5044299 3407.1.1.2 mixed a+b and a/b › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain › Nop5_56-rel_N_Arc 0.67 57.0 4.52e-01 100.0% 70.4%
4996324 3239.1.1.1 alpha complex topology › Cas1 › Cas1 › Cas1 › Cas_Cas1 0.66 45.0 2.83e-01 77.0% 12.8%
4936503 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.66 55.0 4.58e-01 100.0% 96.7%
5036089 3407.1.1.2 mixed a+b and a/b › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain › Nop5_56-rel_N_Arc 0.65 58.0 4.58e-01 100.0% 72.0%
4484607 2003.1.3.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO 0.64 45.0 2.73e-01 82.0% 11.2%
3970163 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.64 55.0 5.17e-01 98.4% 89.3%
3278693 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.63 53.0 4.47e-01 100.0% 90.4%
4545531 220.1.1.255 beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_10 0.63 48.0 4.48e-01 90.2% 65.0%
375944 4100.1.1.2 a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › PHD_like 0.63 44.0 3.91e-01 73.8% 97.8%
4675950 7502.1.1.1 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.63 52.0 4.16e-01 93.4% 69.6%
3943749 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.63 53.0 3.59e-01 100.0% 99.2%
3616040 2003.1.2.103 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Prenylcys_lyase, NAD_binding_8 0.62 46.0 2.74e-01 82.0% 10.8%
3169442 2484.1.1.2 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin 0.62 53.0 3.08e-01 100.0% 95.3%
5054192 802.1.1.0 a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 0.62 45.0 3.88e-01 78.7% 49.0%
5066918 2004.1.1.97 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MobB 0.62 50.0 3.66e-01 91.8% 54.3%
4601711 2484.1.1.47 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › T2SSL 0.62 53.0 4.66e-01 100.0% 86.3%
4494953 6020.1.1.1 a+b two layers › Beta domain of DivIB/FtsQ › Beta domain of DivIB/FtsQ › Beta domain of DivIB/FtsQ › FtsQ_DivIB_C 0.61 49.0 3.81e-01 86.9% 70.8%
3970105 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.61 53.0 4.99e-01 98.4% 93.3%
1892334 2484.1.1.47 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › T2SSL 0.61 52.0 4.74e-01 100.0% 83.9%
3289369 220.1.1.255 beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_10 0.61 47.0 4.38e-01 90.2% 66.3%
4927363 802.1.1.0 a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 0.60 44.0 4.20e-01 80.3% 72.0%
4140586 6020.1.1.1 a+b two layers › Beta domain of DivIB/FtsQ › Beta domain of DivIB/FtsQ › Beta domain of DivIB/FtsQ › FtsQ_DivIB_C 0.59 49.0 3.76e-01 91.8% 65.7%
4113552 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.58 48.0 4.50e-01 100.0% 82.5%
5081646 7528.1.1.0 a/b three-layered sandwiches › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains 0.57 45.0 3.92e-01 93.4% 82.9%
4638432 6020.1.1.1 a+b two layers › Beta domain of DivIB/FtsQ › Beta domain of DivIB/FtsQ › Beta domain of DivIB/FtsQ › FtsQ_DivIB_C 0.56 46.0 3.64e-01 91.8% 68.5%
4989646 3156.1.1.1 beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › COX2 0.56 42.0 3.29e-01 82.0% 46.7%
5063800 2002.1.1.43 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › His_biosynth 0.56 48.0 3.29e-01 100.0% 83.0%
2872794 4263.2.1.1 a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain › FtsH_ext 0.55 39.0 3.67e-01 78.7% 59.3%
4308313 314.1.1.0 a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases 0.54 42.0 2.64e-01 100.0% 14.3%
4266955 4263.2.1.1 a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain › FtsH_ext 0.53 37.0 3.68e-01 75.4% 70.8%
3973032 2007.1.14.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like 0.52 43.0 3.58e-01 98.4% 92.5%
3280505 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.52 37.0 3.18e-01 77.0% 66.7%
3548207 221.4.1.6 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX-like 0.52 41.0 3.19e-01 90.2% 84.1%
4358638 2488.1.1.12 a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › Methyltrans_RNA 0.52 45.0 3.30e-01 100.0% 77.5%
2606849 7581.1.1.13 a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › ACP_syn_III 0.51 37.0 2.75e-01 82.0% 53.3%
5026228 2007.1.14.5 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › Peripla_BP_2 0.51 41.0 3.14e-01 96.7% 61.1%