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OM982621.1__UOL48710.1__X__00115

Bact-Vir

OM982621.1__UOL48710.1__X__00115

Identity

Accession:
OM982621 ↗
Kingdom:
phage

Quality

83.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vandenendeviridae› Otagovirus› Pseudomonas_phage_Astolliot

TaxID: 2928830

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-55
PDB
Domain cluster: representative
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3uk6A02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.63 45.0 3.91e-01 75.9% 89.2%
1kblA05 1.20.80.30 Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › 0.62 51.0 4.44e-01 98.1% 98.9%
3nuhB02 3.30.300.370 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › 0.57 48.0 3.81e-01 100.0% 89.3%
5zjgA02 1.10.246.130 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Gamma-glutamyltranspeptidase, large (L) subunit, C-terminal domain 0.56 44.0 3.59e-01 90.7% 78.6%
2bbrA01 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.55 45.0 3.84e-01 90.7% 61.8%
2lfhA00 4.10.280.10 Few Secondary Structures › Irregular › MYOD Basic-Helix-Loop-Helix Domain, subunit B › Helix-loop-helix DNA-binding domain 0.54 41.0 3.88e-01 85.2% 83.8%
2krxA01 3.90.940.40 Alpha Beta › Alpha-Beta Complex › Eukaryotic RPB6 RNA polymerase subunit › Protein CHLORORESPIRATORY REDUCTION 7 0.54 44.0 4.17e-01 100.0% 94.4%
6s10A01 1.10.1710.10 Mainly Alpha › Orthogonal Bundle › Fertility Inhibition Protein O; Chain: A; Domain 1 › ProQ/FinO domain 0.53 35.0 2.91e-01 70.4% 52.0%
2wdqC00 1.20.1300.10 Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit 0.53 36.0 2.93e-01 72.2% 90.9%
4ggmX02 3.40.140.80 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › LpxI C-terminal catalytic domain 0.52 43.0 3.25e-01 100.0% 93.3%
3w3sA02 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.52 42.0 2.64e-01 98.1% 36.9%
2kgfA00 1.10.375.10 Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein 0.51 40.0 3.09e-01 92.6% 95.7%
7f0uA01 1.10.8.1190 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Papain-like viral protease, thumb domain 0.51 42.0 3.58e-01 96.3% 68.4%
4csqA00 2.30.29.190 Mainly Beta › Roll › PH-domain like › 0.50 43.0 3.45e-01 100.0% 74.3%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4113879 1.1.7.2 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ribosomal_L3 0.78 53.0 3.30e-01 70.4% 14.4%
3797432 130.1.1.0 ↗ alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif 0.66 57.0 5.79e-01 92.6% 96.2%
None — 0.64 46.0 2.77e-01 77.8% 82.2%
3286729 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.60 50.0 3.49e-01 90.7% 61.2%
3964882 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.58 43.0 3.34e-01 83.3% 97.0%
3921782 207.1.1.22 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_6 0.55 44.0 2.88e-01 92.6% 74.2%
4526935 1.1.7.50 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 0.53 44.0 3.28e-01 100.0% 94.4%
5035636 304.26.1.1 ↗ a+b two layers › Alpha-beta plaits › MTH1187/YkoF-like › MTH1187/YkoF-like › Thiamine_BP 0.51 42.0 3.55e-01 100.0% 76.0%
3184216 101.1.17.19 ↗ alpha arrays › HTH › HTH › FF domain › DEK_C 0.50 36.0 3.49e-01 96.3% 69.2%