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OM982621.1UOL48817.1X__00222

Bact-Vir

OM982621.1__UOL48817.1__X__00222

Identity

Accession:: OM982621 ↗
Kingdom:: phage

Quality

86.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vandenendeviridae› Otagovirus› Pseudomonas_phage_Astolliot

TaxID: 2928830

Cluster

View cluster (8 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-91

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF08993.16 best	T4_Gp59_N	28.0	3.30e-06	83.9%	68.8%

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1c1kA01	1.10.8.60	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 ›	0.84	73.0	6.90e-01	93.1%	86.3%
1aabA00	1.10.30.10	Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain	0.60	42.0	4.32e-01	73.6%	80.7%
4d3zA02	1.10.132.130	Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 ›	0.58	38.0	3.49e-01	81.6%	51.8%
6rloK01	1.10.1450.10	Mainly Alpha › Orthogonal Bundle › Cd81 Antigen, Extracellular Domain; Chain: A › Tetraspanin	0.56	31.0	3.30e-01	78.2%	61.3%
1ukfA00	3.90.70.20	Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A ›	0.51	42.0	3.40e-01	94.3%	99.5%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4841	546.1.1.1 ↗	alpha complex topology › gene 59 helicase assembly protein › gene 59 helicase assembly protein › gene 59 helicase assembly protein	0.81	75.0	5.48e-01	100.0%	42.4%
5026197	5069.1.1.95 ↗	alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Nitrate_red_gam	0.60	33.0	2.40e-01	79.3%	18.8%
3995511	5001.1.1.0 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like	0.53	40.0	2.79e-01	80.5%	81.7%

D2 high residues 111-205

PDB

Domain cluster: rep: NC_021073.1__YP_007878004.1__VPDG_00032__00031__D94-197

CATH (6)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1c1kA02	1.10.220.50	Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Bacteriophage T4, Gp59, helicase assembly protein, C-terminal domain	0.92	87.0	8.11e-01	100.0%	90.4%
2p5tA00	1.10.8.130	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 ›	0.65	33.0	3.44e-01	88.4%	51.1%
2vtyA00	1.10.437.10	Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like	0.57	33.0	2.94e-01	100.0%	37.5%
1szqA02	3.30.1330.120	Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › 2-methylcitrate dehydratase PrpD	0.55	38.0	3.30e-01	100.0%	47.2%
3icxA01	1.10.287.660	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin	0.54	29.0	3.29e-01	86.3%	68.0%
2mhhA00	1.10.238.10	Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand	0.51	39.0	3.93e-01	100.0%	81.2%

ECOD (10)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4841	546.1.1.1 ↗	alpha complex topology › gene 59 helicase assembly protein › gene 59 helicase assembly protein › gene 59 helicase assembly protein	0.92	87.0	6.46e-01	100.0%	47.9%
4318541	4006.1.1.1 ↗	alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF	0.56	32.0	3.12e-01	91.6%	49.5%
4091184	4044.1.1.1 ↗	alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Prismane	0.54	27.0	2.57e-01	81.1%	40.9%
5027644	632.22.1.0 ↗	alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats	0.54	30.0	2.97e-01	87.4%	50.0%
4027257	3871.1.1.1 ↗	alpha duplicates or obligate multimers › PHIST › PHIST › PHIST › PRESAN	0.53	28.0	2.48e-01	86.3%	32.4%
4206524	605.2.1.3 ↗	alpha duplicates or obligate multimers › ROP-like › Hypothetical protein D-63 › Hypothetical protein D-63 › Seryl_tRNA_N	0.52	30.0	2.87e-01	87.4%	49.1%
3965738	182.1.1.1 ↗	alpha complex topology › Cryptochrome/photolyase FAD-binding domain-related › Cryptochrome/photolyase FAD-binding domain-related › Cryptochrome/photolyase FAD-binding domain › FAD_binding_7	0.52	43.0	3.35e-01	93.7%	71.3%
3428376	109.4.1.1258 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2	0.52	38.0	3.06e-01	78.9%	49.8%
4079591	192.7.1.2 ↗	alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N	0.52	30.0	2.87e-01	87.4%	50.0%
4049608	192.7.1.2 ↗	alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N	0.51	29.0	2.82e-01	87.4%	49.1%