←Back to structures
OM982621.1__UOL48868.1__X__00273
Bact-VirOM982621.1__UOL48868.1__X__00273
Identity
- Accession:
- OM982621 ↗
- Kingdom:
- phage
Quality
74.2
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Vandenendeviridae›
Otagovirus›
Pseudomonas_phage_Astolliot
TaxID: 2928830
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-54
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1inpA02 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.64 | 55.0 | 3.82e-01 | 100.0% | 81.8% |
| 3n75A03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.61 | 46.0 | 3.19e-01 | 80.8% | 72.9% |
| 2khoA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.60 | 48.0 | 3.50e-01 | 92.3% | 32.1% |
| 3aa0B01 | 1.20.58.570 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › F-actin capping protein, alpha/beta subunit, N-terminal domain | 0.58 | 43.0 | 3.68e-01 | 92.3% | 48.9% |
| 3jysA01 | 1.25.40.390 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.57 | 48.0 | 3.15e-01 | 92.3% | 29.1% |
| 3ejnA01 | 1.25.40.390 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.57 | 45.0 | 3.06e-01 | 88.5% | 28.4% |
| 4ii2A06 | 3.10.290.60 | Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › Ubiquitin-activating enzyme E1, UFD domain | 0.56 | 39.0 | 3.27e-01 | 75.0% | 95.7% |
| 1auwA02 | 1.20.200.10 | Mainly Alpha › Up-down Bundle › Fumarase C; Chain A, domain 2 › Fumarase/aspartase (Central domain) | 0.55 | 48.0 | 3.16e-01 | 100.0% | 99.6% |
| 2iuwA00 | 2.60.120.590 | Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like | 0.54 | 41.0 | 2.87e-01 | 88.5% | 77.6% |
| 1fxkB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.52 | 47.0 | 3.62e-01 | 98.1% | 65.1% |
| 2zdiB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.52 | 47.0 | 3.67e-01 | 100.0% | 54.7% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3280523 | 632.15.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) | 0.71 | 49.0 | 3.94e-01 | 98.1% | 38.0% |
| 3488059 | 109.4.1.72 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Vps16_C | 0.68 | 42.0 | 3.03e-01 | 90.4% | 23.6% |
| 3591105 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.67 | 43.0 | 2.83e-01 | 100.0% | 15.2% |
| 5077402 | 2007.15.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › N-deoxyribosyltransferase › N-deoxyribosyltransferase | 0.67 | 53.0 | 3.70e-01 | 96.2% | 25.9% |
| 5038479 | 3563.1.1.1 ↗ | alpha bundles › Twin arginine protein translocation system component TatC › Twin arginine protein translocation system component TatC › Twin arginine protein translocation system component TatC › TatC | 0.63 | 44.0 | 2.87e-01 | 73.1% | 18.4% |
| 1207585 | 225.1.1.0 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0.63 | 44.0 | 3.85e-01 | 75.0% | 75.3% |
| 3355227 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.62 | 42.0 | 2.48e-01 | 71.2% | 9.1% |
| 3492068 | 5076.1.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr | 0.60 | 45.0 | 2.79e-01 | 80.8% | 46.5% |
| 4009409 | 109.4.1.2353 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HemY_N, TPR_2 | 0.60 | 51.0 | 3.01e-01 | 96.2% | 12.3% |
| 3741047 | 221.1.1.179 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ams2-SPT21_N | 0.60 | 47.0 | 3.61e-01 | 92.3% | 39.3% |
| 3769782 | 263.1.1.4 ↗ | a+b three layers › SRF-like › SRF-like › SRF-like › PRAS_NT | 0.59 | 46.0 | 4.15e-01 | 82.7% | 67.6% |
| 4567744 | 7579.1.1.37 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › DUF1749 | 0.59 | 48.0 | 2.94e-01 | 90.4% | 52.5% |
| 3440722 | 263.1.1.1 ↗ | a+b three layers › SRF-like › SRF-like › SRF-like › SRF-TF | 0.57 | 45.0 | 3.28e-01 | 98.1% | 31.0% |
| 3588048 | 304.156.1.0 ↗ | a+b two layers › Alpha-beta plaits › DNA translocase FtsK N-terminal domain › DNA translocase FtsK N-terminal domain | 0.57 | 42.0 | 3.38e-01 | 80.8% | 95.2% |
| 3839456 | 7564.1.1.1 ↗ | a/b three-layered sandwiches › Homo-oligomeric flavin-containing Cys decarboxylases, HFCD › Homo-oligomeric flavin-containing Cys decarboxylases, HFCD › Homo-oligomeric flavin-containing Cys decarboxylases, HFCD › Flavoprotein | 0.57 | 38.0 | 2.68e-01 | 71.2% | 82.6% |
| 3857827 | 109.4.1.2045 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, TPR_6 | 0.56 | 46.0 | 3.02e-01 | 88.5% | 25.0% |
| 5080307 | 256.1.1.0 ↗ | a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like | 0.56 | 42.0 | 4.51e-01 | 80.8% | 95.6% |
| 3435470 | 109.4.1.2075 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, TPR_2, TPR_19 | 0.56 | 45.0 | 2.93e-01 | 88.5% | 23.1% |
| 3832097 | 263.1.1.1 ↗ | a+b three layers › SRF-like › SRF-like › SRF-like › SRF-TF | 0.55 | 46.0 | 3.77e-01 | 96.2% | 50.5% |
| 3634139 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 45.0 | 2.86e-01 | 90.4% | 53.7% |
| 4024358 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.54 | 49.0 | 3.16e-01 | 100.0% | 33.8% |
| 3412378 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.54 | 39.0 | 4.24e-01 | 80.8% | 88.9% |
| 4202518 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.53 | 46.0 | 3.17e-01 | 100.0% | 69.2% |
| 3198044 | 604.6.1.0 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain | 0.52 | 46.0 | 3.80e-01 | 100.0% | 91.6% |
| 4011647 | 109.4.1.198 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_12 | 0.52 | 45.0 | 2.85e-01 | 96.2% | 54.5% |
| 3166299 | 109.4.1.520 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HemY_N | 0.52 | 42.0 | 2.70e-01 | 98.1% | 19.2% |
| 5083210 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.51 | 43.0 | 3.31e-01 | 90.4% | 70.9% |
| 3680772 | 109.4.1.728 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.50 | 44.0 | 2.95e-01 | 100.0% | 24.4% |
| 4928288 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.50 | 38.0 | 3.33e-01 | 96.2% | 99.0% |