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OM982646.1__UUB18120.1__X__00052
Bact-VirOM982646.1__UUB18120.1__X__00052
Identity
- Accession:
- OM982646 ↗
- Kingdom:
- phage
Quality
69.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 20-103
Domain cluster:
rep: NC_048700.1__YP_009837529.1__HWB55_gp072__00088__D25-97
CATH (40)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7tlrA01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.68 | 50.0 | 3.57e-01 | 78.6% | 35.0% |
| 3evzA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.63 | 53.0 | 4.29e-01 | 92.9% | 54.2% |
| 5ereA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.63 | 54.0 | 4.61e-01 | 95.2% | 62.8% |
| 5ijgA01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.63 | 54.0 | 4.05e-01 | 95.2% | 45.5% |
| 3sg0A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.62 | 53.0 | 4.39e-01 | 95.2% | 61.8% |
| 2xw7A00 | 3.40.430.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A | 0.62 | 45.0 | 3.60e-01 | 77.4% | 68.6% |
| 5eswB00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.62 | 54.0 | 4.16e-01 | 96.4% | 51.3% |
| 2gpyB00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.62 | 52.0 | 4.07e-01 | 95.2% | 44.3% |
| 3kgyA00 | 3.40.430.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A | 0.61 | 44.0 | 3.34e-01 | 77.4% | 71.6% |
| 3h8lA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.61 | 45.0 | 3.44e-01 | 78.6% | 57.6% |
| 3io5A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 51.0 | 3.57e-01 | 92.9% | 39.1% |
| 3szuA03 | 3.40.1010.20 | Alpha Beta › 3-Layer(aba) Sandwich › Cobalt-precorrin-4 Transmethylase; domain 1 › 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, catalytic domain | 0.61 | 52.0 | 5.00e-01 | 97.6% | 87.0% |
| 3ky8A01 | 3.40.430.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A | 0.60 | 44.0 | 3.50e-01 | 77.4% | 70.7% |
| 8bixC01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.60 | 53.0 | 3.78e-01 | 97.6% | 36.9% |
| 2afrA00 | 3.40.50.10230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin biosynthesis CobH/CbiC, precorrin-8X methylmutase | 0.60 | 52.0 | 3.82e-01 | 95.2% | 56.5% |
| 4oc9A01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.60 | 52.0 | 3.60e-01 | 97.6% | 31.3% |
| 4ozjA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 38.0 | 3.49e-01 | 77.4% | 51.9% |
| 1y0bB01 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.59 | 50.0 | 3.98e-01 | 96.4% | 57.4% |
| 2p8jA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.59 | 49.0 | 3.72e-01 | 92.9% | 42.2% |
| 4icsA01 | 3.40.1830.10 | Alpha Beta › 3-Layer(aba) Sandwich › Thermophilic metalloprotease-like › Thermophilic metalloprotease (M29) | 0.59 | 49.0 | 3.91e-01 | 95.2% | 66.1% |
| 3gpiA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.59 | 50.0 | 3.48e-01 | 94.0% | 31.1% |
| 3aczA01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.59 | 49.0 | 3.54e-01 | 94.0% | 34.5% |
| 1qgnG01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.58 | 51.0 | 3.61e-01 | 97.6% | 34.7% |
| 1jflA02 | 3.40.50.1860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 49.0 | 4.52e-01 | 94.0% | 95.4% |
| 3ahcA02 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.58 | 50.0 | 3.75e-01 | 96.4% | 55.0% |
| 7f1uA01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.57 | 48.0 | 3.48e-01 | 94.0% | 35.1% |
| 2dt5A02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 46.0 | 3.94e-01 | 90.5% | 65.9% |
| 2ht1A02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 47.0 | 3.54e-01 | 95.2% | 52.0% |
| 2nxwA01 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.56 | 48.0 | 3.84e-01 | 97.6% | 50.0% |
| 4isyA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.56 | 46.0 | 3.41e-01 | 94.0% | 40.9% |
| 6q2eA01 | 3.40.50.11840 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Diphthamide synthesis DPH1/DPH2 domain 1 | 0.56 | 48.0 | 4.75e-01 | 95.2% | 94.3% |
| 3qmvB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.55 | 44.0 | 3.17e-01 | 88.1% | 62.2% |
| 6dw1A00 | 2.70.170.10 | Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain | 0.55 | 44.0 | 3.35e-01 | 88.1% | 88.1% |
| 2zg5A02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.54 | 45.0 | 3.37e-01 | 92.9% | 42.4% |
| 1qo0D01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 42.0 | 3.68e-01 | 84.5% | 56.7% |
| 3fetA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.53 | 47.0 | 3.80e-01 | 100.0% | 87.3% |
| 3lwsA01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.53 | 43.0 | 3.19e-01 | 92.9% | 37.5% |
| 4piwA01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.52 | 45.0 | 3.34e-01 | 97.6% | 38.0% |
| 2ek0A00 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.52 | 42.0 | 4.12e-01 | 88.1% | 85.6% |
| 2nykA02 | 2.60.40.2530 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 31.0 | 3.09e-01 | 85.7% | 57.5% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3955767 | 323.1.1.37 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding, Condensation | 0.68 | 49.0 | 2.70e-01 | 75.0% | 6.3% |
| 4547476 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.64 | 48.0 | 3.84e-01 | 79.8% | 45.3% |
| 4949660 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.63 | 47.0 | 4.54e-01 | 79.8% | 70.5% |
| 4943318 | 2004.1.1.90 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CobA_CobO_BtuR | 0.62 | 54.0 | 4.45e-01 | 95.2% | 73.3% |
| 4093719 | 2007.1.2.6 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Glyco_tran_WecG | 0.62 | 52.0 | 4.27e-01 | 95.2% | 56.9% |
| 3942941 | 2007.1.2.6 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Glyco_tran_WecG | 0.60 | 51.0 | 4.24e-01 | 96.4% | 57.4% |
| 4040222 | 2007.1.2.6 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Glyco_tran_WecG | 0.60 | 50.0 | 4.59e-01 | 92.9% | 80.0% |
| 2812996 | 2007.1.2.6 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Glyco_tran_WecG | 0.60 | 51.0 | 4.65e-01 | 96.4% | 81.6% |
| 3707489 | 2003.1.5.70 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_15 | 0.60 | 51.0 | 3.81e-01 | 95.2% | 47.0% |
| 5066062 | 7584.1.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › AMP-binding | 0.60 | 51.0 | 4.24e-01 | 95.2% | 60.7% |
| 4031610 | 2007.1.2.6 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Glyco_tran_WecG | 0.60 | 50.0 | 3.77e-01 | 95.2% | 41.6% |
| 4652309 | 2004.1.1.105 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinase-PPPase | 0.59 | 47.0 | 3.91e-01 | 84.5% | 69.7% |
| None | — | 0.59 | 51.0 | 3.51e-01 | 97.6% | 30.2% | |
| 3579197 | 7577.1.1.7 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Cys_Met_Meta_PP | 0.59 | 49.0 | 3.95e-01 | 94.0% | 51.2% |
| 5002185 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.58 | 50.0 | 3.75e-01 | 96.4% | 50.7% |
| 3730554 | 7525.1.1.1 ↗ | a/b three-layered sandwiches › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › His_Phos_1 | 0.58 | 48.0 | 3.64e-01 | 96.4% | 75.2% |
| 3203646 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.57 | 48.0 | 3.48e-01 | 95.2% | 36.5% |
| 4083144 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.57 | 48.0 | 3.89e-01 | 96.4% | 55.4% |
| 4361709 | 2004.1.1.105 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinase-PPPase | 0.57 | 44.0 | 3.56e-01 | 82.1% | 61.9% |
| 4156887 | 2003.1.7.7 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NagB/RpiA/CoA transferase-like › LUD_dom | 0.57 | 49.0 | 3.44e-01 | 96.4% | 68.4% |
| 3720345 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.56 | 46.0 | 3.64e-01 | 95.2% | 52.1% |
| 4972922 | 7574.1.1.0 ↗ | a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) | 0.54 | 46.0 | 3.56e-01 | 97.6% | 44.0% |
| 3788300 | 2006.1.1.4 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › NIF | 0.53 | 44.0 | 3.40e-01 | 95.2% | 90.0% |
| 4941343 | 247.1.1.11 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 | 0.52 | 45.0 | 3.14e-01 | 100.0% | 44.7% |
| 3480995 | 304.4.1.23 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › Dyp_perox_C | 0.51 | 35.0 | 2.93e-01 | 70.2% | 77.8% |
| 4934703 | 2003.1.7.7 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NagB/RpiA/CoA transferase-like › LUD_dom | 0.51 | 43.0 | 3.21e-01 | 100.0% | 72.7% |