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OM982673.1__UPI12985.1__X__00006

Bact-Vir

OM982673.1__UPI12985.1__X__00006

Identity

Accession:
OM982673 ↗
Kingdom:
phage

Quality

91.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-91
PDB
Domain cluster: representative
CATH (50)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4py5A01 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.77 48.0 5.17e-01 84.9% 75.0%
5bmnA04 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.68 47.0 4.83e-01 86.0% 74.7%
3gkeA02 3.90.380.10 Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 0.68 53.0 4.02e-01 84.9% 41.9%
2f7lA04 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.64 45.0 4.61e-01 86.0% 75.3%
4k2xB02 3.30.70.2450 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.64 35.0 3.65e-01 84.9% 57.3%
2fpnA01 3.30.2030.10 Alpha Beta › 2-Layer Sandwich › TBP-like › YwmB-like 0.62 50.0 4.24e-01 87.2% 53.6%
2ffsA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.61 49.0 4.11e-01 86.0% 75.9%
8es5A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.60 48.0 4.08e-01 86.0% 69.6%
2ehbD00 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.59 47.0 4.13e-01 86.0% 57.9%
2l9pA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.59 47.0 3.82e-01 86.0% 70.7%
2jmuA01 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.59 47.0 3.53e-01 86.0% 71.8%
3ewkA03 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.59 46.0 4.32e-01 86.0% 99.1%
1kfiA04 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.58 46.0 4.09e-01 86.0% 68.8%
2qpvA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.58 46.0 3.98e-01 86.0% 75.0%
2wd6A00 2.60.530.10 Mainly Beta › Sandwich › Major cell-surface adhesin PAc › Major cell-surface adhesin PAc 0.57 41.0 2.85e-01 75.6% 46.7%
2l48A00 3.30.70.2030 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 40.0 4.04e-01 86.0% 72.9%
1eq6A00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.57 50.0 3.94e-01 98.8% 62.4%
2retA00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.57 39.0 4.02e-01 90.7% 72.6%
1vgyA01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.57 47.0 3.34e-01 90.7% 80.1%
1rzmA01 3.30.70.1140 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Phospho-2-dehydro-3-deoxyheptonate aldolase; domain 1 0.55 45.0 4.66e-01 97.7% 97.5%
3o5yB00 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.55 48.0 4.09e-01 98.8% 72.8%
1htwA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 43.0 3.54e-01 84.9% 91.8%
1lshB00 2.20.90.10 Mainly Beta › Single Sheet › Lipovitellin-phosvitin complex; beta-sheet shell regions › Vitellinogen, beta-sheet shell domain 0.55 38.0 3.06e-01 73.3% 39.7%
3aa0B02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.55 41.0 3.41e-01 80.2% 60.6%
3lppA02 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.54 48.0 3.49e-01 97.7% 78.9%
3eliA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 42.0 3.64e-01 86.0% 79.9%
2acaA00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.54 47.0 3.78e-01 97.7% 56.3%
2leqA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 42.0 3.60e-01 86.0% 75.3%
1kyfA02 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.54 42.0 3.89e-01 86.0% 64.6%
2w1rA00 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.54 47.0 4.26e-01 98.8% 80.3%
7jsnA02 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.53 47.0 3.59e-01 98.8% 71.8%
3dbaA00 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.53 46.0 3.75e-01 98.8% 70.2%
2veaA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.53 43.0 3.80e-01 89.5% 70.8%
3p01A02 3.30.450.340 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.53 42.0 4.16e-01 88.4% 97.9%
4uf7B00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.53 45.0 2.87e-01 93.0% 44.9%
2kl8A00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.53 41.0 4.20e-01 86.0% 89.4%
2pokA01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.52 44.0 3.07e-01 93.0% 73.3%
1wguA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 47.0 4.26e-01 100.0% 96.5%
3r0aA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 33.0 3.01e-01 87.2% 46.7%
2lf2A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 40.0 3.28e-01 86.0% 66.9%
1vbkA01 3.30.70.1510 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › THUMP domain-like 0.52 42.0 4.32e-01 98.8% 92.8%
2ia0B02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.51 38.0 3.68e-01 88.4% 69.7%
2rb7A01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.51 43.0 3.12e-01 94.2% 77.1%
2vd3A03 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 36.0 3.84e-01 86.0% 87.8%
2h1yA02 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.51 34.0 3.66e-01 86.0% 85.7%
1l3lA01 3.30.450.80 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain 0.51 43.0 3.58e-01 100.0% 65.3%
2db2A01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.51 38.0 3.70e-01 80.2% 77.7%
1bf5A04 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.50 42.0 3.85e-01 91.9% 80.5%
1tqzA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.50 44.0 3.96e-01 100.0% 89.4%
6cc0A01 3.30.450.80 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain 0.50 43.0 3.59e-01 98.8% 68.3%
ECOD (50)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4409039 2008.1.1.207 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_7 0.64 47.0 3.48e-01 76.7% 72.7%
3960959 211.1.1.0 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.63 40.0 4.61e-01 79.1% 91.7%
2526315 7075.1.1.1 a+b two layers › uncharacterized protein SAMEA2273162_06031 › uncharacterized protein SAMEA2273162_06031 › uncharacterized protein SAMEA2273162_06031 › PF31209 0.63 49.0 4.10e-01 86.0% 63.9%
3961591 331.3.1.11 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.62 49.0 4.07e-01 86.0% 78.1%
3283279 881.1.1.15 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DUF3558 0.61 52.0 4.52e-01 98.8% 61.5%
4931864 331.16.1.1 a+b two layers › TBP-like › TA0095-like › TA0095-like › DUF5611 0.61 44.0 4.20e-01 86.0% 63.8%
3738504 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.59 46.0 4.32e-01 86.0% 69.1%
5053600 331.3.1.11 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.59 47.0 4.10e-01 86.0% 73.8%
3451705 331.4.1.2 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › NAF 0.58 47.0 3.97e-01 86.0% 52.9%
5029047 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.58 50.0 4.24e-01 98.8% 67.3%
3670595 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.58 42.0 4.09e-01 76.7% 69.5%
5010025 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.57 51.0 4.57e-01 97.7% 75.0%
5025689 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.57 51.0 4.50e-01 100.0% 72.8%
3172478 708.1.1.30 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › PF30069, PF30070 0.57 45.0 3.60e-01 86.0% 44.2%
4680120 60.1.1.3 beta barrels › SPOC domain-like › SPOC domain-related › SPOC domain › Sld7_N 0.56 42.0 3.61e-01 80.2% 90.7%
3704313 331.9.1.0 a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain 0.56 44.0 3.91e-01 86.0% 60.8%
3939580 304.107.1.7 a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain › POP1_N+POPLD 0.56 49.0 3.22e-01 100.0% 41.3%
5047752 2011.1.1.6 a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M20 0.55 45.0 3.25e-01 89.5% 77.7%
3278093 2011.1.1.6 a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M20 0.55 47.0 3.29e-01 93.0% 73.8%
4888335 12.3.1.19 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_2 0.55 37.0 2.79e-01 76.7% 27.1%
4960176 223.1.1.23 a+b three layers › Profilin-like › sensor domains › sensor domains › GAF_2 0.55 49.0 3.44e-01 98.8% 40.0%
3997765 59.1.1.0 beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like 0.55 39.0 3.92e-01 74.4% 90.0%
3231133 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 49.0 3.92e-01 100.0% 83.4%
4929322 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.55 46.0 4.37e-01 90.7% 85.0%
4979815 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.55 35.0 3.45e-01 87.2% 60.0%
3639482 220.1.1.211 beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF7612 0.55 45.0 3.84e-01 89.5% 86.4%
5042777 223.7.1.0 a+b three layers › Profilin-like › FLJ32549 C-terminal domain-like › FLJ32549 C-terminal domain-like 0.55 47.0 4.33e-01 97.7% 78.3%
3410208 331.17.1.1 a+b two layers › TBP-like › Atp11 › Atp11 › ATP11 0.55 44.0 3.48e-01 86.0% 50.0%
4329174 223.1.1.7 a+b three layers › Profilin-like › sensor domains › sensor domains › Autoind_bind 0.54 48.0 3.84e-01 98.8% 70.6%
3645309 4099.1.1.27 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › DUF7806 0.54 40.0 3.97e-01 84.9% 73.4%
4929462 873.1.1.0 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain 0.54 42.0 3.79e-01 89.5% 61.7%
3258204 331.17.1.1 a+b two layers › TBP-like › Atp11 › Atp11 › ATP11 0.54 43.0 3.45e-01 86.0% 50.6%
4522783 101.1.2.715 alpha arrays › HTH › HTH › winged helix domain › CheF-arch 0.54 48.0 3.37e-01 100.0% 33.2%
3701944 331.17.1.1 a+b two layers › TBP-like › Atp11 › Atp11 › ATP11 0.53 43.0 3.39e-01 87.2% 49.7%
4582465 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.53 47.0 4.38e-01 100.0% 88.2%
2740189 12.4.1.2 beta sandwiches › Glycosyl hydrolase domain-like › V-region of surface antigen I/II (SA I/II, PAC) › V-region of surface antigen I/II (SA I/II, PAC) › GbpC 0.53 38.0 2.68e-01 76.7% 46.2%
3247299 7089.1.1.0 a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD 0.53 45.0 4.14e-01 100.0% 75.0%
4586436 223.1.1.7 a+b three layers › Profilin-like › sensor domains › sensor domains › Autoind_bind 0.52 46.0 3.67e-01 100.0% 64.4%
4939124 873.1.1.19 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › MetOD1 0.52 43.0 3.63e-01 91.9% 67.3%
3369480 304.9.1.6 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › Smg4_UPF3 0.52 43.0 3.85e-01 93.0% 96.0%
4001313 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.52 45.0 3.62e-01 97.7% 86.3%
3953532 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.52 44.0 3.71e-01 98.8% 85.0%
3537588 331.17.1.1 a+b two layers › TBP-like › Atp11 › Atp11 › ATP11 0.52 41.0 3.27e-01 86.0% 51.4%
3427093 708.1.1.8 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FAR1 0.52 40.0 3.87e-01 86.0% 94.9%
3691059 844.1.1.0 beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain 0.51 40.0 3.16e-01 81.4% 71.8%
4977561 206.1.1.11 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH 0.51 42.0 2.88e-01 93.0% 67.6%
3196340 216.1.1.0 a+b two layers › UBC-like › UBC-like › UBC-like 0.51 43.0 3.26e-01 94.2% 48.8%
3407180 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.51 32.0 3.22e-01 70.9% 62.4%
3504732 12.3.1.19 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_2 0.50 39.0 2.90e-01 86.0% 96.7%
3613380 304.28.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.50 37.0 3.75e-01 96.5% 78.8%