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ON014753.1__UQS94827.1__Pam1_07__00007
Bact-VirON014753.1__UQS94827.1__Pam1_07__00007
Identity
- Accession:
- ON014753 ↗
- Kingdom:
- phage
Quality
91.6
mean pLDDT
Cluster
View cluster (5 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-48_121-170
Domain cluster:
rep: NC_013599.1__YP_003344925.1__Xfas53_gene35__00035__D4-118
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1vt0k00 | 1.10.3230.20 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein yqbg › P22 tail accessory factor (Gp4) | 0.82 | 77.0 | 6.54e-01 | 100.0% | 71.7% |
| 3smvA02 | 1.10.150.750 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.59 | 43.0 | 4.67e-01 | 90.5% | 94.8% |
| 3m03B00 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.58 | 45.0 | 4.55e-01 | 96.8% | 84.2% |
| 7kypE01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 45.0 | 3.54e-01 | 98.9% | 37.3% |
| 6fhpD00 | 1.10.390.10 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 | 0.57 | 33.0 | 3.86e-01 | 71.6% | 85.5% |
| 2ymmA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.57 | 39.0 | 4.33e-01 | 93.7% | 94.5% |
| 2nq2D00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 45.0 | 3.44e-01 | 98.9% | 34.3% |
| 1tzvA00 | 1.10.940.10 | Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like | 0.56 | 47.0 | 4.11e-01 | 91.6% | 82.3% |
| 1aj5A00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.54 | 43.0 | 3.55e-01 | 86.3% | 86.7% |
| 1aa7A02 | 1.10.10.180 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Influenza matrix protein M1, N-terminal subdomain 2 | 0.53 | 37.0 | 4.07e-01 | 97.9% | 88.5% |
| 1x42A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.53 | 38.0 | 4.05e-01 | 90.5% | 89.2% |
| 1vw4L02 | 1.10.246.170 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.51 | 34.0 | 3.56e-01 | 89.5% | 75.3% |
| 4p17A02 | 1.10.8.270 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › putative rabgap domain of human tbc1 domain family member 14 like domains | 0.51 | 38.0 | 3.66e-01 | 98.9% | 69.1% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4031309 | 4275.1.1.1 ↗ | alpha arrays › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Phage_connect_1 | 0.61 | 52.0 | 5.32e-01 | 98.9% | 98.9% |
| 4954549 | 4275.1.1.0 ↗ | alpha arrays › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like | 0.60 | 54.0 | 5.21e-01 | 100.0% | 98.2% |
| 3290592 | 191.1.1.64 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › DUF4254 | 0.53 | 44.0 | 3.99e-01 | 91.6% | 76.9% |
| 3945748 | 162.1.1.1 ↗ | alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PRD | 0.52 | 39.0 | 3.93e-01 | 78.9% | 100.0% |
| 3946724 | 191.1.1.17 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_13 | 0.51 | 41.0 | 3.69e-01 | 89.5% | 69.4% |
| 3789411 | 608.1.1.0 ↗ | alpha arrays › AhpD-like › AhpD-like › AhpD-like | 0.50 | 44.0 | 3.14e-01 | 100.0% | 42.0% |
D2
high
residues 53-111
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2r44A02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.64 | 53.0 | 3.92e-01 | 94.9% | 62.3% |
| 4dnyA00 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 50.0 | 4.20e-01 | 100.0% | 65.1% |
| 1lp8A01 | 3.40.420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 | 0.57 | 42.0 | 3.04e-01 | 79.7% | 37.0% |
| 3p24A01 | 2.40.128.470 | Mainly Beta › Beta Barrel › Lipocalin › | 0.57 | 39.0 | 2.95e-01 | 100.0% | 28.1% |
| 3k6qA01 | 3.40.1620.10 | Alpha Beta › 3-Layer(aba) Sandwich › YefM-like fold › YefM-like domain | 0.57 | 38.0 | 4.09e-01 | 100.0% | 85.4% |
| 3g7kB02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.55 | 46.0 | 3.40e-01 | 100.0% | 66.3% |
| 2qlcA00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.55 | 46.0 | 3.70e-01 | 98.3% | 77.0% |
| 1vpkA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.55 | 31.0 | 2.52e-01 | 94.9% | 27.5% |
| 1m0sA01 | 3.40.50.1360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.54 | 46.0 | 3.44e-01 | 93.2% | 47.3% |
| 3eqnA02 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.54 | 43.0 | 2.79e-01 | 100.0% | 39.0% |
| 2cu2A00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.54 | 38.0 | 2.47e-01 | 79.7% | 56.7% |
| 3viuA04 | 3.90.650.10 | Alpha Beta › Alpha-Beta Complex › Phosphoribosyl-aminoimidazole Synthetase; Chain A, domain 2 › PurM-like C-terminal domain | 0.53 | 47.0 | 3.38e-01 | 100.0% | 85.5% |
| 4on1A01 | 2.40.128.470 | Mainly Beta › Beta Barrel › Lipocalin › | 0.52 | 36.0 | 2.87e-01 | 100.0% | 32.4% |
| 4v02C00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.51 | 44.0 | 3.55e-01 | 100.0% | 61.5% |
| 1ciaA00 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.51 | 42.0 | 2.98e-01 | 100.0% | 47.9% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3281086 | 207.4.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like | 0.67 | 55.0 | 4.14e-01 | 100.0% | 36.7% |
| 3251052 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.64 | 54.0 | 3.47e-01 | 96.6% | 22.0% |
| 3277120 | 207.1.1.12 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FNIP | 0.63 | 54.0 | 3.25e-01 | 98.3% | 14.1% |
| 4020398 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.62 | 51.0 | 2.99e-01 | 93.2% | 59.6% |
| 3513418 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.61 | 32.0 | 3.59e-01 | 93.2% | 62.2% |
| 5057421 | 225.1.1.7 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c_3 | 0.60 | 48.0 | 3.31e-01 | 89.8% | 87.6% |
| 4943032 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.59 | 51.0 | 3.59e-01 | 100.0% | 68.7% |
| 5012331 | 7518.1.1.7 ↗ | a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › DacZ_T | 0.57 | 41.0 | 3.54e-01 | 79.7% | 84.0% |
| 4269760 | 2003.1.5.22 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_Mtase | 0.57 | 49.0 | 3.13e-01 | 100.0% | 55.2% |
| 3974743 | 207.14.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A | 0.56 | 47.0 | 4.00e-01 | 96.6% | 68.0% |
| 5078911 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.54 | 45.0 | 3.16e-01 | 100.0% | 96.0% |
| 4930980 | 304.111.1.1 ↗ | a+b two layers › Alpha-beta plaits › PurM C-terminal domain-like › PurM C-terminal domain-like › AIRS_C | 0.53 | 46.0 | 3.38e-01 | 100.0% | 87.3% |
| 4355512 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.51 | 44.0 | 3.01e-01 | 100.0% | 49.6% |
| 3035765 | 3113.1.1.1 ↗ | few secondary structure elements › Evasin-1 › Evasin-1 › Evasin-1 › EVA_Class_A | 0.50 | 37.0 | 3.29e-01 | 81.4% | 64.1% |