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ON014754.1__UQS94931.1__Pam2_51__00051
Bact-VirON014754.1__UQS94931.1__Pam2_51__00051
Identity
- Accession:
- ON014754 ↗
- Kingdom:
- phage
Quality
63.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-110
D2
high
residues 118-200
Domain cluster:
rep: rifcsphigho2_12_scaffold_16_prodigal-single.1__X__X__00586__D1-82
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF10544.16 best | T5orf172 | 24.0 | 6.50e-05 | 97.6% | 89.8% |
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5ja1B00 | 3.90.820.10 | Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id | 0.66 | 40.0 | 4.39e-01 | 75.9% | 75.8% |
| 2pstX00 | 3.90.820.10 | Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id | 0.64 | 40.0 | 4.49e-01 | 84.3% | 86.9% |
| 1ywlA00 | 3.40.1440.10 | Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.64 | 56.0 | 5.36e-01 | 100.0% | 91.7% |
| 3liuA01 | 2.60.40.3160 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.61 | 47.0 | 4.23e-01 | 95.2% | 58.5% |
| 3mahA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.60 | 46.0 | 4.89e-01 | 100.0% | 98.6% |
| 3lupA01 | 3.40.50.10170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.56 | 49.0 | 4.01e-01 | 98.8% | 93.5% |
| 3nyiB01 | 3.40.50.10170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 47.0 | 3.87e-01 | 95.2% | 93.6% |
| 1mw7A02 | 3.30.70.980 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain | 0.55 | 42.0 | 4.22e-01 | 83.1% | 98.9% |
| 2qsdB02 | 3.50.100.10 | Alpha Beta › 3-Layer(bba) Sandwich › protein il1583 fold › protein il1583 domain | 0.54 | 38.0 | 3.96e-01 | 73.5% | 78.2% |
| 2q18X01 | 3.10.330.40 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.54 | 35.0 | 3.81e-01 | 97.6% | 80.0% |
| 3nxaB00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.54 | 42.0 | 4.07e-01 | 94.0% | 74.2% |
| 2qenA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 39.0 | 4.18e-01 | 85.5% | 90.0% |
| 1n0eA00 | 3.40.1550.20 | Alpha Beta › 3-Layer(aba) Sandwich › Chemotaxis protein chec › Transcriptional regulator MraZ domain | 0.53 | 41.0 | 3.48e-01 | 84.3% | 63.8% |
| 1konA02 | 3.30.70.980 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain | 0.53 | 41.0 | 4.01e-01 | 83.1% | 87.8% |
| 2cs4A00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.52 | 37.0 | 3.59e-01 | 100.0% | 65.3% |
| 7bjkA02 | 3.55.40.20 | Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › Iron/manganese superoxide dismutase, C-terminal domain | 0.52 | 36.0 | 3.30e-01 | 100.0% | 54.0% |
| 3r5dA01 | 3.30.70.2010 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 39.0 | 3.43e-01 | 100.0% | 53.5% |
| 2ebmA00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.51 | 42.0 | 3.62e-01 | 89.2% | 81.2% |
| 1ifqB00 | 3.30.450.50 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin domain | 0.51 | 45.0 | 3.95e-01 | 100.0% | 95.3% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3946107 | 821.1.1.3 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › T5orf172 | 0.87 | 81.0 | 7.71e-01 | 100.0% | 98.9% |
| 4016088 | 821.1.1.3 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › T5orf172 | 0.83 | 77.0 | 7.08e-01 | 100.0% | 96.2% |
| 3698242 | 821.1.1.10 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › MUG113 | 0.83 | 78.0 | 6.68e-01 | 100.0% | 77.2% |
| 3666940 | 821.1.1.1 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG | 0.77 | 58.0 | 5.09e-01 | 79.5% | 60.0% |
| 4158495 | 821.1.1.1 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG | 0.71 | 64.0 | 6.24e-01 | 98.8% | 98.9% |
| 4623707 | 821.1.1.1 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG | 0.71 | 64.0 | 6.12e-01 | 100.0% | 92.6% |
| 3942510 | 821.1.1.1 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG | 0.70 | 63.0 | 6.07e-01 | 100.0% | 91.6% |
| 4397568 | 821.1.1.1 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG | 0.70 | 63.0 | 6.16e-01 | 100.0% | 96.7% |
| 4974123 | 821.1.1.14 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › DUF2797 | 0.66 | 59.0 | 5.55e-01 | 97.6% | 92.0% |
| 3400351 | 379.1.1.0 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors | 0.65 | 45.0 | 5.16e-01 | 89.2% | 98.3% |
| 4969409 | 821.1.1.14 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › DUF2797 | 0.64 | 56.0 | 5.08e-01 | 98.8% | 87.8% |
| 1003912 | 821.1.1.1 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG | 0.64 | 56.0 | 5.36e-01 | 100.0% | 91.7% |
| 3505268 | 821.1.1.0 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.63 | 54.0 | 4.61e-01 | 95.2% | 98.5% |
| 4986747 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.61 | 46.0 | 3.46e-01 | 79.5% | 74.9% |
| 3397043 | 306.5.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › GTP cyclohydrolase I feedback regulatory protein, GFRP › GTP cyclohydrolase I feedback regulatory protein, GFRP | 0.61 | 42.0 | 4.26e-01 | 100.0% | 73.8% |
| 3412052 | 379.1.1.0 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors | 0.61 | 38.0 | 4.27e-01 | 81.9% | 86.7% |
| 3987406 | 3115.6.1.1 ↗ | a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › RpoY | 0.59 | 44.0 | 4.56e-01 | 79.5% | 100.0% |
| 3786945 | 4007.1.1.1 ↗ | a+b two layers › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › Transcrip_reg | 0.58 | 45.0 | 4.34e-01 | 83.1% | 91.6% |
| 4369641 | 1.1.1.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › tRNA-synt_1_2 | 0.58 | 43.0 | 3.26e-01 | 78.3% | 36.4% |
| 3970696 | 821.1.1.0 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.57 | 50.0 | 4.57e-01 | 100.0% | 72.6% |
| 1937230 | 2010.1.1.1 ↗ | a/b three-layered sandwiches › EDD domain › EDD domain › EDD domain › DegV | 0.57 | 51.0 | 4.08e-01 | 98.8% | 93.8% |
| 4487057 | 4007.1.1.1 ↗ | a+b two layers › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › Transcrip_reg | 0.55 | 43.0 | 4.19e-01 | 83.1% | 94.4% |
| 4949204 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.53 | 40.0 | 2.99e-01 | 79.5% | 58.4% |
| 3803352 | 3257.1.1.1 ↗ | a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Syja_N | 0.52 | 46.0 | 3.52e-01 | 100.0% | 73.0% |
| 4982145 | 216.1.1.4 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › RWD | 0.51 | 37.0 | 3.38e-01 | 98.8% | 54.2% |
| 3489385 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 40.0 | 3.54e-01 | 94.0% | 57.6% |
| 3803359 | 304.3.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA | 0.50 | 45.0 | 4.62e-01 | 100.0% | 100.0% |