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ON014754.1__UQS95060.1__Pam2_180__00180
Bact-VirON014754.1__UQS95060.1__Pam2_180__00180
Identity
- Accession:
- ON014754 ↗
- Kingdom:
- phage
Quality
92.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-85
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ga3A00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.59 | 50.0 | 4.44e-01 | 100.0% | 64.6% |
| 1lp1A00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.59 | 34.0 | 3.92e-01 | 84.4% | 80.0% |
| 1gzmA00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.54 | 40.0 | 2.77e-01 | 83.1% | 89.9% |
| 1d7aA00 | 3.40.50.1970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.54 | 46.0 | 3.71e-01 | 98.7% | 82.6% |
| 1mw9X02 | 1.10.460.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 | 0.54 | 46.0 | 3.72e-01 | 100.0% | 73.0% |
| 3lcnB00 | 1.10.340.40 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Nuclear abundant poly(A) RNA-bind protein 2, N-terminal domain | 0.53 | 43.0 | 3.98e-01 | 88.3% | 95.9% |
| 4f88102 | 3.90.1720.60 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › | 0.52 | 36.0 | 2.61e-01 | 74.0% | 25.8% |
| 2ppqA02 | 3.90.1200.10 | Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe | 0.51 | 42.0 | 3.14e-01 | 94.8% | 81.3% |
| 2e8gA01 | 1.20.1440.150 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.50 | 44.0 | 3.80e-01 | 100.0% | 91.1% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4162420 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.69 | 33.0 | 2.76e-01 | 100.0% | 26.4% |
| 3483570 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.69 | 38.0 | 3.53e-01 | 100.0% | 43.2% |
| 3364608 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.63 | 32.0 | 2.15e-01 | 100.0% | 11.4% |
| 3414050 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.62 | 34.0 | 3.06e-01 | 100.0% | 37.1% |
| 4934911 | 2002.1.1.16 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Bac_luciferase | 0.57 | 49.0 | 3.21e-01 | 100.0% | 99.7% |
| 3748203 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.55 | 35.0 | 2.79e-01 | 88.3% | 31.2% |
| 4672121 | 1002.1.1.1 ↗ | alpha complex topology › Fluoride ion channel › Fluoride ion channel › Fluoride ion channel › CRCB | 0.54 | 39.0 | 3.38e-01 | 76.6% | 66.9% |
| 3805401 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.52 | 43.0 | 3.05e-01 | 90.9% | 91.0% |
| 3731014 | 2002.1.1.111 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI | 0.52 | 42.0 | 2.99e-01 | 98.7% | 97.4% |
| 4625078 | 1002.1.1.1 ↗ | alpha complex topology › Fluoride ion channel › Fluoride ion channel › Fluoride ion channel › CRCB | 0.52 | 37.0 | 3.24e-01 | 76.6% | 70.7% |
| 3539405 | 138.1.1.15 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › MINAR1_N | 0.51 | 36.0 | 3.34e-01 | 72.7% | 63.2% |
| 3231709 | 197.1.1.1 ↗ | alpha bundles › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › FERM_M | 0.51 | 43.0 | 3.82e-01 | 100.0% | 63.3% |
| 3798417 | 197.1.1.0 ↗ | alpha bundles › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like | 0.50 | 43.0 | 3.71e-01 | 100.0% | 70.0% |