Back to structures

ON041214.1__UOL51107.1__X__00023

Bact-Vir

ON041214.1__UOL51107.1__X__00023

Identity

Accession:
ON041214 ↗
Kingdom:
phage

Quality

85.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 427-481
PDB
Domain cluster: representative
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3933741 3998.1.1.1 alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Inhibitor_I29 0.56 44.0 4.04e-01 83.6% 67.1%
D2 medium residues 159-225
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF05136.19 best Phage_portal_2 50.2 3.10e-13 100.0% 14.4%
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1g6zA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.69 38.0 3.83e-01 80.6% 51.4%
3au0A01 2.60.40.1280 Mainly Beta › Sandwich › Immunoglobulin-like › 0.66 36.0 2.77e-01 82.1% 23.5%
2avwD01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.64 41.0 3.19e-01 89.6% 31.2%
2gu1A01 3.10.450.350 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 37.0 3.45e-01 89.6% 47.7%
2au3A02 3.90.980.10 Alpha Beta › Alpha-Beta Complex › DNA primase DNAg catalytic core, N-terminal domain › DNA primase, catalytic core, N-terminal domain 0.56 40.0 3.29e-01 100.0% 40.2%
2qecA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.55 48.0 3.53e-01 100.0% 43.9%
3d3sA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.55 41.0 3.18e-01 91.0% 34.6%
2af5A02 3.90.930.1 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › 0.54 37.0 2.93e-01 71.6% 37.7%
4z48A00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.53 43.0 2.99e-01 91.0% 73.3%
3mmyA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 37.0 2.43e-01 80.6% 21.2%
1iicA02 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.51 41.0 2.91e-01 95.5% 34.3%
ECOD (11)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3977478 4056.1.1.9 beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Phage_portal_2 0.92 86.0 7.30e-01 100.0% 66.0%
5082725 4056.1.1.9 beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Phage_portal_2 0.84 78.0 6.69e-01 100.0% 68.0%
3981484 4056.1.1.9 beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Phage_portal_2 0.80 72.0 6.22e-01 100.0% 65.0%
5083372 4056.1.1.0 beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein 0.71 58.0 5.32e-01 92.5% 69.4%
638 4.8.1.1 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo 0.69 38.0 3.83e-01 80.6% 51.4%
4993200 4.6.1.2 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC 0.63 41.0 3.98e-01 89.6% 60.0%
3603761 4.6.1.2 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC 0.61 41.0 4.01e-01 88.1% 62.7%
4938385 4.6.1.2 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC 0.58 38.0 3.64e-01 89.6% 57.5%
3262549 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.55 43.0 2.97e-01 85.1% 70.0%
3729690 4.1.1.170 beta barrels › SH3 › SH3 › SH3 › Rad9_Rad53_bind 0.53 42.0 3.81e-01 88.1% 68.4%
3761319 4.1.1.253 beta barrels › SH3 › SH3 › SH3 › DUF4537 0.52 35.0 3.53e-01 89.6% 70.8%