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ON045001.1__UPU15847.1__X__00050

Bact-Vir

ON045001.1__UPU15847.1__X__00050

Identity

Accession:
ON045001 ↗
Kingdom:
phage

Quality

76.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Drexlerviridae› Klebsiella_phage_vB_KpnS_SXFY507

TaxID: 2932860

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 28-92
PDB
Domain cluster: representative
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1w96C04 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.66 49.0 3.34e-01 81.5% 30.1%
3v67A01 3.30.450.210 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Two-component sensor protein CpxA, periplasmic domain 0.66 50.0 4.10e-01 83.1% 62.0%
4clcA00 3.30.450.150 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Haem-degrading domain 0.65 48.0 3.61e-01 81.5% 57.4%
5l09B00 3.30.450.80 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain 0.61 47.0 3.56e-01 84.6% 64.0%
1a9xA06 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.61 48.0 3.49e-01 90.8% 39.9%
6bwsB00 3.30.450.150 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Haem-degrading domain 0.60 44.0 3.59e-01 81.5% 69.3%
3tw6C01 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.60 47.0 2.91e-01 90.8% 17.8%
1dv2A02 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.59 46.0 3.11e-01 89.2% 27.6%
1vs0A02 3.30.470.30 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme 0.58 45.0 3.89e-01 87.7% 55.5%
3udfA01 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.58 43.0 2.78e-01 84.6% 69.3%
4hnvB01 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.58 45.0 2.93e-01 90.8% 23.1%
6kjcA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.53 41.0 2.52e-01 84.6% 86.7%
3cjmA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.53 38.0 2.68e-01 80.0% 80.4%
3popA02 3.40.462.20 Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › 0.52 42.0 3.00e-01 100.0% 57.1%
2bvfA03 3.40.462.20 Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › 0.51 41.0 3.08e-01 100.0% 65.7%
7rd0A02 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.50 39.0 2.60e-01 90.8% 91.0%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3972969 272.1.1.0 ↗ a+b two layers › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain 0.83 69.0 6.01e-01 89.2% 76.8%
4628638 272.1.1.1 ↗ a+b two layers › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TonB_C 0.81 68.0 6.06e-01 90.8% 76.7%
3839673 272.1.1.1 ↗ a+b two layers › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TonB_C 0.80 66.0 5.54e-01 90.8% 62.7%
4881621 10.12.1.43 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-Fe_Oxy_2 0.76 67.0 4.58e-01 100.0% 77.8%
2599555 272.1.1.1 ↗ a+b two layers › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TonB_C 0.76 64.0 5.46e-01 95.4% 67.3%
4944154 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.72 53.0 4.25e-01 78.5% 65.6%
3284615 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.71 56.0 4.17e-01 84.6% 66.9%
4944314 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.71 54.0 4.38e-01 83.1% 64.0%
3840130 272.1.1.3 ↗ a+b two layers › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TonB_2 0.67 53.0 4.98e-01 92.3% 81.2%
4623391 223.1.1.7 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › Autoind_bind 0.66 51.0 3.80e-01 84.6% 61.2%
3628791 3680.1.1.1 ↗ a+b complex topology › Zinc finger FYVE domain-containing protein 9 C-terminal domain › Zinc finger FYVE domain-containing protein 9 C-terminal domain › Zinc finger FYVE domain-containing protein 9 C-terminal domain › SARA_C 0.65 55.0 4.28e-01 98.5% 52.3%
3505782 7508.1.1.1 ↗ a/b three-layered sandwiches › O-glucosyltransferase rumi N-terminal domain › O-glucosyltransferase rumi N-terminal domain › O-glucosyltransferase rumi N-terminal domain › Glyco_transf_90 0.65 47.0 4.13e-01 76.9% 50.0%
4945022 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.65 50.0 4.43e-01 86.2% 80.0%
4586436 223.1.1.7 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › Autoind_bind 0.63 49.0 3.63e-01 86.2% 58.3%
4944643 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.62 45.0 3.75e-01 78.5% 60.0%
3262069 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.62 45.0 3.37e-01 80.0% 100.0%
4020038 7508.1.1.0 ↗ a/b three-layered sandwiches › O-glucosyltransferase rumi N-terminal domain › O-glucosyltransferase rumi N-terminal domain › O-glucosyltransferase rumi N-terminal domain 0.61 45.0 3.57e-01 81.5% 35.3%
3928420 3680.1.1.0 ↗ a+b complex topology › Zinc finger FYVE domain-containing protein 9 C-terminal domain › Zinc finger FYVE domain-containing protein 9 C-terminal domain › Zinc finger FYVE domain-containing protein 9 C-terminal domain 0.61 46.0 3.63e-01 84.6% 58.0%
3966115 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.57 46.0 3.53e-01 90.8% 49.4%
3250180 223.3.1.6 ↗ a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Peptidase_S13 0.56 44.0 3.33e-01 87.7% 68.8%
4405873 223.2.1.33 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_3 0.53 40.0 3.43e-01 86.2% 71.3%
4974057 2006.1.1.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.52 38.0 2.62e-01 81.5% 32.5%
3637444 4121.1.1.0 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like 0.51 37.0 2.59e-01 80.0% 92.9%