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ON045087.1__UPU15883.1__X__00057
Bact-VirON045087.1__UPU15883.1__X__00057
Identity
- Accession:
- ON045087 ↗
- Kingdom:
- phage
Quality
77.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-62
Domain cluster:
representative
CATH (40)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4emoC00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.68 | 49.0 | 4.03e-01 | 78.7% | 100.0% |
| 4n06A01 | 3.100.10.20 | Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain | 0.67 | 48.0 | 4.39e-01 | 77.0% | 81.7% |
| 3d0jA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.66 | 45.0 | 3.48e-01 | 100.0% | 31.2% |
| 7cr6D01 | 3.100.10.20 | Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain | 0.66 | 45.0 | 4.11e-01 | 72.1% | 79.3% |
| 3tesA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 46.0 | 4.00e-01 | 100.0% | 50.0% |
| 1owwA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 46.0 | 4.02e-01 | 100.0% | 50.5% |
| 3uh8A00 | 2.60.40.3350 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 43.0 | 3.51e-01 | 78.7% | 89.8% |
| 3mi6A01 | 2.70.98.60 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis | 0.59 | 48.0 | 3.16e-01 | 95.1% | 57.9% |
| 3up1A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 43.0 | 3.62e-01 | 100.0% | 45.2% |
| 6jhpA01 | 2.70.98.60 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis | 0.59 | 47.0 | 3.06e-01 | 90.2% | 60.6% |
| 4ba0A01 | 2.60.40.1760 | Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) | 0.59 | 45.0 | 3.25e-01 | 86.9% | 73.9% |
| 2ebfX01 | 3.10.670.10 | Alpha Beta › Roll › Secreted effector protein ssei fold › Secreted effector protein ssei. | 0.59 | 52.0 | 3.67e-01 | 100.0% | 40.4% |
| 3kyeA00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.59 | 35.0 | 2.85e-01 | 86.9% | 30.3% |
| 6phxA01 | 2.70.98.60 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis | 0.58 | 48.0 | 3.13e-01 | 95.1% | 58.2% |
| 3rj2X00 | 2.60.120.1150 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 42.0 | 3.31e-01 | 100.0% | 35.3% |
| 1n26A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 40.0 | 3.76e-01 | 100.0% | 57.7% |
| 2ntkB00 | 3.60.20.20 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Inosine monophosphate cyclohydrolase-like | 0.57 | 47.0 | 3.37e-01 | 95.1% | 98.0% |
| 2i0rA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.56 | 47.0 | 3.00e-01 | 98.4% | 99.4% |
| 2m3xC02 | 2.40.10.360 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.56 | 38.0 | 3.73e-01 | 80.3% | 63.8% |
| 6igbA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 46.0 | 2.94e-01 | 100.0% | 98.9% |
| 1ou8A00 | 2.30.30.220 | Mainly Beta › Roll › SH3 type barrels. › SspB-like | 0.55 | 46.0 | 3.99e-01 | 100.0% | 67.9% |
| 3igfA02 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 43.0 | 4.12e-01 | 91.8% | 74.3% |
| 7oode01 | 3.90.930.12 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 | 0.55 | 42.0 | 4.08e-01 | 85.2% | 85.3% |
| 4p04A01 | 2.60.40.3100 | Mainly Beta › Sandwich › Immunoglobulin-like › Arylsulphate sulphotransferase monomer, N-terminal domain | 0.54 | 42.0 | 3.58e-01 | 100.0% | 50.0% |
| 7kcgA01 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.54 | 44.0 | 3.58e-01 | 96.7% | 100.0% |
| 3nziA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.54 | 40.0 | 3.39e-01 | 100.0% | 46.2% |
| 3e8vA00 | 2.60.40.1120 | Mainly Beta › Sandwich › Immunoglobulin-like › Carboxypeptidase-like, regulatory domain | 0.54 | 36.0 | 3.41e-01 | 100.0% | 53.7% |
| 2dhjA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 44.0 | 3.66e-01 | 100.0% | 69.6% |
| 2qsdA01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.53 | 41.0 | 4.01e-01 | 100.0% | 80.6% |
| 7dpyB01 | 2.40.128.200 | Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor | 0.53 | 40.0 | 3.69e-01 | 85.2% | 96.4% |
| 4osnA00 | 2.30.29.100 | Mainly Beta › Roll › PH-domain like › | 0.52 | 43.0 | 3.72e-01 | 100.0% | 91.8% |
| 2nmlA00 | 3.30.2260.10 | Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary | 0.52 | 46.0 | 3.92e-01 | 100.0% | 72.0% |
| 2eddA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 38.0 | 3.21e-01 | 82.0% | 80.4% |
| 4eqaC00 | 2.40.128.650 | Mainly Beta › Beta Barrel › Lipocalin › | 0.52 | 46.0 | 3.44e-01 | 100.0% | 78.7% |
| 4bv4R00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.51 | 37.0 | 2.24e-01 | 82.0% | 10.7% |
| 1ib8A02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.51 | 40.0 | 3.97e-01 | 100.0% | 83.6% |
| 2gumB03 | 2.30.29.100 | Mainly Beta › Roll › PH-domain like › | 0.51 | 42.0 | 3.54e-01 | 100.0% | 86.8% |
| 4ksnA00 | 6.20.250.80 | Special › Other non-globular › Double Stranded RNA Binding Domain › | 0.51 | 42.0 | 4.21e-01 | 100.0% | 92.3% |
| 1wgpA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.50 | 41.0 | 3.32e-01 | 100.0% | 46.3% |
| 5hkeA01 | 3.60.60.10 | Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A | 0.50 | 39.0 | 2.62e-01 | 93.4% | 94.1% |
ECOD (49)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3166677 | 3792.1.1.0 ↗ | beta sandwiches › 26S proteasome subunit Rpn2 C-terminal domain › 26S proteasome subunit Rpn2 C-terminal domain › 26S proteasome subunit Rpn2 C-terminal domain | 0.74 | 46.0 | 4.15e-01 | 100.0% | 45.9% |
| 4058174 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.66 | 49.0 | 4.88e-01 | 100.0% | 76.9% |
| 4681343 | 2.10.1.0 ↗ | beta barrels › OB-fold › CheW › CheW | 0.64 | 49.0 | 4.31e-01 | 100.0% | 54.7% |
| 3515993 | 220.1.1.13 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DCP1 | 0.61 | 51.0 | 4.10e-01 | 95.1% | 84.2% |
| 3786078 | 109.4.1.1764 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF28917 | 0.60 | 47.0 | 2.83e-01 | 88.5% | 43.4% |
| 4965160 | 220.5.1.1 ↗ | beta barrels › PH domain-like › NucS N-terminal domain › NucS N-terminal domain › NucS_N | 0.60 | 51.0 | 4.52e-01 | 100.0% | 93.7% |
| 3926070 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.60 | 46.0 | 2.89e-01 | 83.6% | 69.6% |
| 4674170 | 4.1.1.17 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 | 0.60 | 52.0 | 4.24e-01 | 100.0% | 55.0% |
| 3480535 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.60 | 50.0 | 4.24e-01 | 95.1% | 81.9% |
| 26896 | 4184.1.1.2 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b | 0.60 | 40.0 | 3.62e-01 | 93.4% | 50.0% |
| 3578590 | 4184.1.1.2 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b | 0.59 | 40.0 | 3.64e-01 | 93.4% | 50.6% |
| 3508939 | 220.1.1.13 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DCP1 | 0.59 | 48.0 | 3.87e-01 | 95.1% | 77.7% |
| 3414272 | 220.1.1.22 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C | 0.58 | 48.0 | 4.25e-01 | 95.1% | 95.8% |
| 3636874 | 220.1.1.69 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Meiotic_rec114 | 0.58 | 48.0 | 3.87e-01 | 100.0% | 82.1% |
| 1066050 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.58 | 48.0 | 4.01e-01 | 100.0% | 74.6% |
| 4025925 | 219.1.1.37 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C97 | 0.58 | 45.0 | 3.62e-01 | 100.0% | 42.4% |
| 3246415 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.56 | 46.0 | 3.84e-01 | 100.0% | 92.0% |
| 3923043 | 4326.1.1.1 ↗ | a+b two layers › ERH-like › ERH-like › ERH-like › ER | 0.56 | 50.0 | 4.25e-01 | 100.0% | 74.0% |
| 3702792 | 2003.1.2.12 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › DAO | 0.56 | 50.0 | 2.97e-01 | 100.0% | 19.1% |
| 3411079 | 3369.1.1.1 ↗ | beta meanders › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › Lamp2-like_luminal | 0.56 | 48.0 | 3.51e-01 | 100.0% | 87.2% |
| 3902541 | 319.1.1.5 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › PIH1_CS | 0.56 | 46.0 | 4.16e-01 | 93.4% | 78.8% |
| 3636918 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.56 | 48.0 | 3.31e-01 | 100.0% | 28.0% |
| 5033222 | 375.1.1.26 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 | 0.55 | 44.0 | 3.68e-01 | 86.9% | 71.4% |
| 3413570 | 2487.1.1.7 ↗ | a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" › PA | 0.55 | 45.0 | 3.43e-01 | 98.4% | 87.1% |
| 3584885 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.54 | 38.0 | 3.89e-01 | 100.0% | 78.3% |
| 3903397 | 102.1.1.124 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › CABIT | 0.54 | 44.0 | 4.13e-01 | 100.0% | 75.0% |
| 3485317 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.54 | 39.0 | 2.30e-01 | 88.5% | 8.2% |
| 3931078 | 3369.1.1.0 ↗ | beta meanders › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 | 0.53 | 46.0 | 3.38e-01 | 100.0% | 89.0% |
| 3506401 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.53 | 42.0 | 2.71e-01 | 88.5% | 22.9% |
| 3942998 | 4056.1.1.0 ↗ | beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein | 0.53 | 44.0 | 4.26e-01 | 100.0% | 88.6% |
| 3801791 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 37.0 | 3.65e-01 | 100.0% | 70.8% |
| 2404945 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.53 | 41.0 | 2.88e-01 | 88.5% | 36.0% |
| 4943092 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.53 | 43.0 | 3.43e-01 | 93.4% | 47.4% |
| 5008468 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.53 | 40.0 | 3.10e-01 | 88.5% | 71.2% |
| 3514750 | 220.1.1.52 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SNX17_FERM_C | 0.52 | 46.0 | 3.83e-01 | 100.0% | 60.9% |
| 4463837 | 375.1.1.26 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 | 0.52 | 40.0 | 3.34e-01 | 83.6% | 72.4% |
| 4618815 | 73.1.1.16 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › Dicty_REP | 0.52 | 46.0 | 3.68e-01 | 98.4% | 97.5% |
| 3708118 | 2004.1.1.26 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin | 0.52 | 39.0 | 2.50e-01 | 83.6% | 14.9% |
| 5082482 | 4056.1.1.0 ↗ | beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein | 0.52 | 45.0 | 4.24e-01 | 100.0% | 98.7% |
| 3705968 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.52 | 44.0 | 3.42e-01 | 100.0% | 97.2% |
| 1447939 | 11.36.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Csd4 Ig-like domain › Csd4 Ig-like domain › Peptidase_M99_m | 0.51 | 42.0 | 3.95e-01 | 90.2% | 89.2% |
| 3463181 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 36.0 | 3.54e-01 | 100.0% | 67.1% |
| 3789233 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.51 | 43.0 | 4.29e-01 | 96.7% | 95.4% |
| 3249076 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 42.0 | 3.28e-01 | 100.0% | 40.0% |
| 3591100 | 2004.1.1.250 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd | 0.51 | 39.0 | 2.47e-01 | 86.9% | 14.1% |
| 3098472 | 375.1.1.3 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Ribosomal_L33 | 0.51 | 40.0 | 4.15e-01 | 100.0% | 94.6% |
| None | — | 0.51 | 41.0 | 2.80e-01 | 91.8% | 49.4% | |
| 4961746 | 304.8.1.122 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › DmsR_N | 0.51 | 43.0 | 3.62e-01 | 100.0% | 100.0% |
| 5061515 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.51 | 42.0 | 3.61e-01 | 96.7% | 70.5% |