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ON045087.1__UPU15924.1__X__00098

Bact-Vir

ON045087.1__UPU15924.1__X__00098

Identity

Accession:
ON045087 ↗
Kingdom:
phage

Quality

82.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 32-90
PDB
Domain cluster: representative
CATH (54)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1r71A01 1.10.10.730 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › KorB DNA-binding domain 0.85 61.0 6.26e-01 79.7% 78.6%
3p7nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 61.0 5.71e-01 79.7% 62.5%
4gvpA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.83 64.0 4.23e-01 81.4% 26.2%
3ulqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 60.0 6.14e-01 83.1% 79.3%
6v7xB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 60.0 6.16e-01 78.0% 92.9%
3iuoA00 1.10.10.1390 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › ATP-dependent DNA helicase RecQ 0.80 63.0 5.08e-01 86.4% 45.9%
2elhA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 59.0 5.70e-01 84.7% 69.7%
1p4wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 59.0 5.14e-01 79.7% 60.9%
3zh9B03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.79 64.0 4.94e-01 88.1% 42.1%
6cc0A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 62.0 5.81e-01 84.7% 78.6%
5y9sC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 56.0 5.01e-01 78.0% 70.7%
1j1vA00 1.10.1750.10 Mainly Alpha › Orthogonal Bundle › Chromosomal Replication Initiator Protein Dnaa; Chain: A; › DnaA protein, C-terminal DNA-binding domain 0.77 65.0 5.58e-01 94.9% 60.6%
1l3lA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 58.0 5.70e-01 81.4% 85.7%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.76 56.0 5.75e-01 84.7% 83.9%
1k78A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 57.0 5.53e-01 83.1% 72.7%
5xsoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 59.0 5.39e-01 84.7% 68.4%
6jqsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 59.0 5.64e-01 84.7% 83.6%
1jhfA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 56.0 5.37e-01 81.4% 76.8%
4nvsA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.74 53.0 3.85e-01 74.6% 56.1%
2l4mA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 54.0 5.19e-01 79.7% 69.6%
5exvC00 3.40.1570.10 Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains 0.72 48.0 3.44e-01 74.6% 24.8%
1q1hA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 53.0 4.72e-01 81.4% 55.3%
2k9sA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.71 53.0 4.42e-01 81.4% 44.9%
3mn2A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.71 52.0 4.31e-01 79.7% 47.2%
5z4zC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 56.0 4.92e-01 86.4% 70.5%
3szpA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 54.0 4.76e-01 84.7% 67.4%
2m8gX00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.69 51.0 4.83e-01 79.7% 68.6%
3vm9A02 6.10.140.2110 Special › Helix non-globular › Helix Hairpins › 0.69 46.0 4.71e-01 78.0% 71.9%
2p5vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 52.0 5.50e-01 81.4% 90.4%
2xrnB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 54.0 5.29e-01 84.7% 78.1%
2prrA02 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.69 58.0 4.66e-01 100.0% 87.4%
3fm5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 55.0 4.25e-01 88.1% 49.2%
4dkcB00 1.20.1250.80 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › Interleukin-34 0.68 48.0 3.50e-01 89.8% 27.5%
3ckyA02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.68 55.0 4.22e-01 89.8% 85.8%
2mh2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 49.0 4.78e-01 78.0% 76.6%
3ecoB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 53.0 4.13e-01 89.8% 55.8%
1xl3C00 1.20.1280.80 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.65 54.0 4.69e-01 93.2% 75.8%
2kjfA00 1.20.225.10 Mainly Alpha › Up-down Bundle › Bacteriocin As-48; Chain A › Bacteriocin AS-48 0.65 48.0 4.77e-01 79.7% 86.7%
1zhcA00 6.10.280.50 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.63 49.0 4.54e-01 94.9% 65.8%
3nkhA00 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.63 55.0 3.72e-01 98.3% 96.4%
5fo5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 49.0 4.33e-01 86.4% 72.7%
2js5A00 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.63 50.0 4.69e-01 89.8% 71.8%
4kjmA02 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.62 35.0 3.64e-01 74.6% 58.2%
3d36B02 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.62 46.0 4.59e-01 88.1% 77.0%
3rq9A00 1.10.287.2500 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.62 44.0 4.06e-01 88.1% 57.7%
1x4oA00 1.10.10.790 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Surp module 0.60 45.0 4.18e-01 83.1% 73.1%
2dk8A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 45.0 4.43e-01 84.7% 76.9%
2yayA02 1.20.1670.10 Mainly Alpha › Up-down Bundle › all-alpha NTP pyrophosphatase › Type II deoxyuridine triphosphatase 0.59 45.0 3.47e-01 83.1% 36.3%
2yfqB01 1.10.8.1210 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.58 44.0 4.62e-01 94.9% 94.2%
4ragA02 1.10.10.430 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Phosphatase 2C, C-terminal domain suprefamily 0.58 43.0 4.24e-01 86.4% 86.8%
1xzpA02 1.20.120.430 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › tRNA modification GTPase MnmE domain 2 0.57 50.0 3.63e-01 100.0% 56.0%
2of7A02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.56 47.0 3.61e-01 94.9% 64.3%
2np5D00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.52 47.0 3.42e-01 100.0% 99.4%
2ig3A00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.52 43.0 3.39e-01 93.2% 56.7%
ECOD (64)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3941922 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.88 62.0 6.48e-01 76.3% 80.0%
4944887 101.1.1.546 alpha arrays › HTH › HTH › Three-helical HTH › ThiN 0.84 68.0 5.35e-01 89.8% 43.3%
5074939 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.84 56.0 5.84e-01 71.2% 74.5%
4606105 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.83 73.0 6.02e-01 94.9% 57.0%
144712 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.83 69.0 5.56e-01 89.8% 50.5%
4994602 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.82 54.0 5.46e-01 72.9% 68.3%
4964802 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.81 63.0 6.29e-01 83.1% 81.7%
3969534 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.81 53.0 5.48e-01 71.2% 72.7%
167531 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.80 59.0 5.30e-01 84.7% 57.5%
5083903 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.80 71.0 6.01e-01 98.3% 66.3%
4031830 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.80 54.0 5.80e-01 71.2% 84.0%
3385990 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.79 69.0 5.60e-01 94.9% 54.3%
4659087 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.79 55.0 5.66e-01 78.0% 78.2%
3409145 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.79 56.0 5.99e-01 81.4% 88.0%
3602804 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.78 54.0 5.83e-01 74.6% 86.0%
3957642 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.77 55.0 5.73e-01 79.7% 81.8%
3947236 101.1.1.58 alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.77 53.0 5.51e-01 72.9% 81.5%
3544647 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.76 60.0 5.87e-01 89.8% 76.9%
4034069 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.76 54.0 5.58e-01 74.6% 80.0%
4002185 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.76 59.0 5.41e-01 84.7% 65.3%
3243275 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 64.0 4.60e-01 93.2% 70.3%
4173465 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.75 51.0 5.26e-01 74.6% 76.4%
5031250 101.1.2.55 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.74 60.0 5.30e-01 91.5% 65.6%
4281782 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.74 55.0 5.04e-01 81.4% 61.3%
4194508 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.74 54.0 5.62e-01 81.4% 83.6%
4071647 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.74 50.0 5.19e-01 74.6% 76.4%
3693312 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.74 58.0 5.77e-01 84.7% 83.3%
3218722 101.1.1.52 alpha arrays › HTH › HTH › Three-helical HTH › BrkDBD 0.74 53.0 5.22e-01 84.7% 70.8%
3280314 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.73 51.0 5.32e-01 76.3% 80.0%
3837930 101.1.1.347 alpha arrays › HTH › HTH › Three-helical HTH › Phage_integrase 0.73 52.0 5.34e-01 81.4% 80.0%
4400327 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.72 53.0 4.57e-01 81.4% 51.1%
5011614 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.72 53.0 5.20e-01 81.4% 72.3%
3385608 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.72 51.0 5.16e-01 81.4% 75.0%
3735470 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.72 56.0 5.48e-01 88.1% 78.5%
3988020 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.72 52.0 5.10e-01 83.1% 70.8%
5041148 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.72 58.0 5.44e-01 88.1% 72.9%
3290277 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.71 50.0 5.34e-01 78.0% 88.0%
4653037 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.71 57.0 4.55e-01 89.8% 58.3%
4558962 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.70 53.0 5.49e-01 84.7% 87.3%
4058877 101.1.2.27 alpha arrays › HTH › HTH › winged helix domain › LexA_DNA_bind 0.69 55.0 5.20e-01 86.4% 95.7%
4950688 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.69 58.0 4.81e-01 91.5% 66.0%
4960621 2004.1.1.42 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE 0.69 51.0 2.95e-01 78.0% 47.6%
5047003 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.69 54.0 5.12e-01 84.7% 85.7%
2417767 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.68 46.0 4.70e-01 76.3% 71.2%
3623357 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.67 51.0 5.28e-01 88.1% 98.2%
5066321 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 52.0 4.59e-01 88.1% 70.0%
3947884 101.1.1.393 alpha arrays › HTH › HTH › Three-helical HTH › KfrA_N 0.65 47.0 4.90e-01 78.0% 87.3%
4928803 101.1.2.55 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.65 52.0 4.69e-01 91.5% 62.4%
3403488 101.1.1.3 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding 0.65 54.0 5.16e-01 96.6% 95.7%
5027549 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.65 55.0 4.95e-01 93.2% 81.2%
4215471 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.65 46.0 4.61e-01 76.3% 80.0%
4153644 7000.1.1.0 alpha arrays › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS 0.63 49.0 4.94e-01 88.1% 86.7%
5010328 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.62 48.0 4.97e-01 89.8% 96.4%
3689931 130.1.1.0 alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif 0.62 41.0 3.96e-01 72.9% 61.5%
4997858 1075.1.2.0 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain 0.61 50.0 3.57e-01 88.1% 63.5%
4987454 101.1.2.927 alpha arrays › HTH › HTH › winged helix domain › DUF7347 0.61 48.0 4.23e-01 88.1% 70.0%
3996900 601.25.1.0 alpha bundles › Four-helical up-and-down bundle › TrmE connector domain › TrmE connector domain 0.60 48.0 3.75e-01 94.9% 40.0%
4929010 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.60 47.0 4.69e-01 100.0% 86.2%
3769667 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.60 52.0 4.24e-01 94.9% 54.3%
3716076 101.1.2.65 alpha arrays › HTH › HTH › winged helix domain › Rad21_Rec8 0.60 46.0 4.30e-01 86.4% 87.0%
3840064 192.24.1.0 alpha bundles › Long alpha-hairpin › RPC62 helical hairpin domain › RPC62 helical hairpin domain 0.59 48.0 4.11e-01 96.6% 55.8%
4529419 101.1.1.11 alpha arrays › HTH › HTH › Three-helical HTH › HTH_6 0.58 44.0 4.12e-01 83.1% 80.0%
3225250 198.1.1.1 alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2 0.54 42.0 4.01e-01 94.9% 81.3%
4603873 149.1.1.1 alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 0.52 43.0 2.64e-01 94.9% 13.4%