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ON045087.1__UPU15949.1__X__00012
Bact-VirON045087.1__UPU15949.1__X__00012
Identity
- Accession:
- ON045087 ↗
- Kingdom:
- phage
Quality
76.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-47
Domain cluster:
representative
CATH (81)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ku3A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.90 | 80.0 | 6.97e-01 | 100.0% | 75.4% |
| 2lfwA01 | 1.20.140.160 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain | 0.88 | 77.0 | 5.25e-01 | 100.0% | 29.8% |
| 2x48A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.88 | 70.0 | 6.40e-01 | 90.2% | 66.7% |
| 3vfzB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.88 | 77.0 | 6.72e-01 | 100.0% | 66.7% |
| 6v7xB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.88 | 76.0 | 6.91e-01 | 100.0% | 73.2% |
| 1a04A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.88 | 77.0 | 6.15e-01 | 100.0% | 51.2% |
| 2q0oA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.87 | 77.0 | 6.50e-01 | 100.0% | 61.2% |
| 2lvsA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.87 | 73.0 | 6.68e-01 | 100.0% | 71.4% |
| 4gvpA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.87 | 75.0 | 4.73e-01 | 100.0% | 19.9% |
| 1tc3C00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.86 | 73.0 | 6.81e-01 | 100.0% | 76.5% |
| 2r0qC02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.86 | 70.0 | 6.44e-01 | 95.1% | 69.1% |
| 4izzB02 | 1.10.10.1680 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › HetR, N-terminal DNA-binding domain | 0.86 | 75.0 | 6.36e-01 | 100.0% | 61.8% |
| 3c57B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.86 | 74.0 | 7.03e-01 | 100.0% | 83.7% |
| 1gdtB03 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.86 | 70.0 | 6.87e-01 | 100.0% | 84.4% |
| 5fgmA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.85 | 73.0 | 6.33e-01 | 100.0% | 64.6% |
| 6cc0A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.85 | 73.0 | 6.17e-01 | 100.0% | 58.6% |
| 4go1A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.85 | 73.0 | 6.73e-01 | 100.0% | 77.8% |
| 2dbbB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.84 | 74.0 | 6.71e-01 | 100.0% | 78.2% |
| 5f64A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.84 | 71.0 | 5.89e-01 | 100.0% | 54.7% |
| 4nqwA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.83 | 70.0 | 6.16e-01 | 100.0% | 65.6% |
| 5y9sC01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 71.0 | 5.68e-01 | 100.0% | 50.0% |
| 5xe7A01 | 1.20.140.160 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain | 0.81 | 67.0 | 4.67e-01 | 97.6% | 28.2% |
| 2w7nA00 | 1.10.10.2690 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.80 | 66.0 | 5.18e-01 | 100.0% | 44.7% |
| 5z4zC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 68.0 | 5.37e-01 | 100.0% | 47.7% |
| 2f2cA02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.79 | 69.0 | 5.07e-01 | 100.0% | 89.6% |
| 3t0yA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 65.0 | 5.87e-01 | 100.0% | 70.0% |
| 4xviA01 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.77 | 62.0 | 4.40e-01 | 100.0% | 29.2% |
| 5trdA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 65.0 | 5.22e-01 | 100.0% | 54.8% |
| 7pzaA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 67.0 | 5.26e-01 | 100.0% | 65.1% |
| 5fo5A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 66.0 | 5.18e-01 | 100.0% | 46.6% |
| 1wi9A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 65.0 | 5.91e-01 | 100.0% | 74.1% |
| 1a9xA04 | 1.10.1030.10 | Mainly Alpha › Orthogonal Bundle › Carbamoyl Phosphate Synthetase; Chain A, domain 4 › Carbamoyl-phosphate synthetase, large subunit oligomerisation domain | 0.76 | 64.0 | 4.43e-01 | 100.0% | 45.3% |
| 1biaA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 63.0 | 5.59e-01 | 100.0% | 67.2% |
| 1rr7A02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.75 | 62.0 | 6.00e-01 | 100.0% | 83.3% |
| 1lvaA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 62.0 | 5.56e-01 | 100.0% | 72.6% |
| 1g2hA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.75 | 61.0 | 5.46e-01 | 95.1% | 70.5% |
| 2cobA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.75 | 60.0 | 6.00e-01 | 97.6% | 93.2% |
| 2fmyA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 64.0 | 5.14e-01 | 100.0% | 67.1% |
| 2auwB02 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.73 | 57.0 | 4.76e-01 | 85.4% | 54.3% |
| 4nb5B01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 61.0 | 4.94e-01 | 100.0% | 65.9% |
| 2r3sB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 60.0 | 4.96e-01 | 100.0% | 54.3% |
| 3gg7A00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.72 | 62.0 | 3.83e-01 | 100.0% | 22.6% |
| 1ojlA03 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.71 | 54.0 | 5.29e-01 | 87.8% | 85.1% |
| 1y9qA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.71 | 54.0 | 4.29e-01 | 85.4% | 43.5% |
| 2a6cA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.71 | 56.0 | 4.63e-01 | 90.2% | 48.7% |
| 1lliA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.71 | 49.0 | 3.89e-01 | 75.6% | 41.6% |
| 1ku9B01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 59.0 | 4.76e-01 | 100.0% | 63.2% |
| 2ef8A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.70 | 52.0 | 4.15e-01 | 82.9% | 44.0% |
| 4pu7A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.70 | 53.0 | 4.47e-01 | 85.4% | 52.1% |
| 2o38A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.69 | 53.0 | 4.65e-01 | 87.8% | 56.9% |
| 1z05A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 57.0 | 4.91e-01 | 100.0% | 59.7% |
| 1mkmB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 56.0 | 4.78e-01 | 100.0% | 56.6% |
| 3op9A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.69 | 52.0 | 4.47e-01 | 85.4% | 54.4% |
| 6rnzA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.68 | 52.0 | 4.49e-01 | 85.4% | 56.1% |
| 2xcjA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.68 | 51.0 | 4.12e-01 | 85.4% | 44.0% |
| 4ybaA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.67 | 53.0 | 4.37e-01 | 90.2% | 53.2% |
| 1qdmA03 | 1.10.225.10 | Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like | 0.67 | 54.0 | 4.58e-01 | 97.6% | 74.0% |
| 1r69A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.67 | 50.0 | 4.43e-01 | 85.4% | 61.9% |
| 3f51C00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.65 | 53.0 | 4.20e-01 | 95.1% | 74.4% |
| 2om6A02 | 1.10.150.400 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.65 | 54.0 | 4.45e-01 | 100.0% | 74.7% |
| 5cz2G00 | 1.10.10.200 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain | 0.64 | 49.0 | 4.97e-01 | 92.7% | 90.2% |
| 8dtqA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.63 | 52.0 | 4.24e-01 | 95.1% | 78.0% |
| 3fymA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.63 | 50.0 | 4.10e-01 | 92.7% | 87.8% |
| 2o0yB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 50.0 | 4.56e-01 | 100.0% | 67.7% |
| 2ictA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.63 | 50.0 | 4.09e-01 | 92.7% | 81.5% |
| 2fjrA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.62 | 45.0 | 3.80e-01 | 80.5% | 51.3% |
| 2go7A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.62 | 52.0 | 4.56e-01 | 100.0% | 80.6% |
| 2bnmA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.62 | 51.0 | 4.25e-01 | 95.1% | 83.8% |
| 3tqnA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 53.0 | 4.45e-01 | 100.0% | 63.0% |
| 6f8hC00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.62 | 51.0 | 4.07e-01 | 100.0% | 74.2% |
| 1b0nA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.62 | 51.0 | 3.85e-01 | 95.1% | 64.1% |
| 1fi2A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.62 | 51.0 | 3.37e-01 | 100.0% | 57.2% |
| 3cecA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.61 | 51.0 | 4.06e-01 | 100.0% | 74.7% |
| 3g0oA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.60 | 50.0 | 3.72e-01 | 100.0% | 83.5% |
| 2ebyA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.60 | 49.0 | 4.14e-01 | 100.0% | 88.6% |
| 1rykA00 | 1.10.1470.10 | Mainly Alpha › Orthogonal Bundle › Protein Yjbj; Chain: A; › YjbJ | 0.59 | 50.0 | 4.32e-01 | 100.0% | 69.6% |
| 1f20A01 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.59 | 49.0 | 3.38e-01 | 100.0% | 32.5% |
| 5i1uA00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.58 | 49.0 | 3.01e-01 | 100.0% | 32.3% |
| 4mc3A00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.57 | 48.0 | 2.98e-01 | 100.0% | 33.4% |
| 1cxzB00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.56 | 46.0 | 3.61e-01 | 92.7% | 50.0% |
| 8h6qD01 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.55 | 47.0 | 2.85e-01 | 100.0% | 30.9% |
ECOD (96)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3573627 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.94 | 86.0 | 5.90e-01 | 100.0% | 33.6% |
| 5028266 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.93 | 82.0 | 7.21e-01 | 100.0% | 67.8% |
| 5064314 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.92 | 81.0 | 7.13e-01 | 100.0% | 68.3% |
| 4987653 | 101.1.2.139 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_23 | 0.91 | 78.0 | 7.59e-01 | 100.0% | 86.7% |
| 3988724 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.91 | 81.0 | 7.10e-01 | 100.0% | 68.3% |
| 4054648 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.91 | 79.0 | 7.15e-01 | 100.0% | 72.7% |
| 4510105 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.91 | 79.0 | 8.07e-01 | 97.6% | 100.0% |
| 5011648 | 101.1.1.368 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_58 | 0.90 | 78.0 | 7.26e-01 | 95.1% | 78.0% |
| 5014141 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.90 | 75.0 | 7.04e-01 | 92.7% | 76.0% |
| 3879118 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.90 | 79.0 | 7.21e-01 | 100.0% | 74.5% |
| 4992862 | 101.1.6.12 ↗ | alpha arrays › HTH › HTH › TrpR › HTH_23 | 0.90 | 80.0 | 6.47e-01 | 100.0% | 66.7% |
| 4987929 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.90 | 79.0 | 6.97e-01 | 100.0% | 68.3% |
| 5063318 | 101.1.6.12 ↗ | alpha arrays › HTH › HTH › TrpR › HTH_23 | 0.90 | 76.0 | 6.88e-01 | 95.1% | 70.9% |
| 4385054 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.89 | 70.0 | 7.06e-01 | 85.4% | 87.5% |
| 3286455 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.89 | 78.0 | 4.89e-01 | 100.0% | 20.0% |
| 3922450 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.89 | 73.0 | 7.43e-01 | 92.7% | 95.0% |
| 3967757 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.89 | 78.0 | 6.37e-01 | 100.0% | 54.7% |
| 4963466 | 101.1.1.368 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_58 | 0.89 | 75.0 | 7.35e-01 | 95.1% | 86.7% |
| 3602714 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.88 | 76.0 | 7.71e-01 | 95.1% | 97.5% |
| 4979402 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.88 | 78.0 | 6.86e-01 | 100.0% | 68.3% |
| 4470400 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.88 | 77.0 | 6.47e-01 | 100.0% | 58.6% |
| 3289034 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.88 | 76.0 | 6.67e-01 | 100.0% | 65.1% |
| 4606780 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.88 | 77.0 | 6.78e-01 | 100.0% | 68.3% |
| 3286174 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.88 | 77.0 | 6.28e-01 | 100.0% | 54.7% |
| 3975610 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.88 | 77.0 | 6.42e-01 | 100.0% | 58.6% |
| 4492035 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.88 | 76.0 | 6.40e-01 | 100.0% | 58.6% |
| 4863786 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.87 | 76.0 | 6.95e-01 | 100.0% | 76.4% |
| 3544647 | 101.1.1.24 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N | 0.87 | 78.0 | 6.63e-01 | 100.0% | 64.6% |
| 3946608 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.87 | 76.0 | 6.37e-01 | 100.0% | 58.6% |
| 3968864 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.87 | 76.0 | 6.25e-01 | 100.0% | 54.7% |
| 3944309 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.87 | 76.0 | 7.16e-01 | 100.0% | 82.0% |
| 4963467 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.87 | 74.0 | 7.19e-01 | 95.1% | 86.7% |
| 5022417 | 101.1.3.8 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Sigma70_r4_2 | 0.87 | 76.0 | 5.97e-01 | 100.0% | 48.2% |
| 3962903 | 101.1.2.486 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_58 | 0.87 | 69.0 | 7.02e-01 | 90.2% | 92.5% |
| 4131887 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.87 | 76.0 | 6.11e-01 | 100.0% | 51.9% |
| 3941764 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.87 | 75.0 | 6.46e-01 | 100.0% | 63.1% |
| 4004247 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.86 | 74.0 | 6.00e-01 | 100.0% | 51.2% |
| 4976095 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.86 | 73.0 | 6.71e-01 | 97.6% | 72.7% |
| 4404485 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.86 | 75.0 | 6.63e-01 | 100.0% | 68.3% |
| 4993585 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.86 | 72.0 | 6.35e-01 | 95.1% | 65.0% |
| 4661582 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.86 | 74.0 | 5.43e-01 | 100.0% | 37.3% |
| 3942514 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.86 | 74.0 | 6.94e-01 | 97.6% | 80.0% |
| 3947091 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.86 | 74.0 | 6.57e-01 | 100.0% | 68.3% |
| 4008322 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.86 | 71.0 | 6.57e-01 | 97.6% | 72.7% |
| 3943462 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.86 | 74.0 | 6.77e-01 | 100.0% | 74.5% |
| 5024511 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.86 | 70.0 | 6.66e-01 | 95.1% | 78.0% |
| 4162857 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.86 | 71.0 | 6.70e-01 | 95.1% | 78.0% |
| 4010691 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.85 | 73.0 | 6.73e-01 | 100.0% | 74.5% |
| 3590732 | 101.1.1.364 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_49 | 0.85 | 71.0 | 6.98e-01 | 97.6% | 88.9% |
| 4578719 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.85 | 73.0 | 6.40e-01 | 100.0% | 65.1% |
| 4008046 | 101.1.1.348 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › PF30461 | 0.85 | 76.0 | 7.10e-01 | 100.0% | 84.0% |
| 4030763 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.85 | 72.0 | 6.29e-01 | 100.0% | 63.1% |
| 3590541 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.84 | 72.0 | 4.67e-01 | 100.0% | 22.8% |
| 3944883 | 3317.1.1.2 ↗ | alpha arrays › KorB C-terminal domain-like › KorB C-terminal domain › KorB C-terminal domain › HTH_ParB | 0.84 | 70.0 | 5.29e-01 | 100.0% | 40.0% |
| 4007717 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.84 | 71.0 | 5.77e-01 | 100.0% | 51.2% |
| 3927372 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.84 | 73.0 | 5.87e-01 | 100.0% | 51.2% |
| 4143289 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.84 | 71.0 | 6.56e-01 | 100.0% | 76.4% |
| 4974224 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.83 | 70.0 | 6.20e-01 | 97.6% | 65.0% |
| 5020571 | 101.1.1.101 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_40 | 0.83 | 71.0 | 5.30e-01 | 100.0% | 39.0% |
| 3972360 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.82 | 70.0 | 6.28e-01 | 100.0% | 68.3% |
| 3941460 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.82 | 69.0 | 6.06e-01 | 100.0% | 63.1% |
| 3477795 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.82 | 69.0 | 6.78e-01 | 100.0% | 91.1% |
| 4943227 | 101.1.1.63 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 | 0.82 | 67.0 | 6.65e-01 | 100.0% | 91.1% |
| 4588822 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.82 | 66.0 | 5.79e-01 | 95.1% | 60.0% |
| 3590885 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.81 | 71.0 | 5.95e-01 | 100.0% | 58.6% |
| 4927516 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.81 | 68.0 | 6.14e-01 | 100.0% | 68.3% |
| 5070991 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.81 | 71.0 | 5.97e-01 | 100.0% | 62.9% |
| 3391053 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.81 | 67.0 | 6.60e-01 | 100.0% | 88.9% |
| 3410877 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.81 | 69.0 | 5.85e-01 | 100.0% | 60.0% |
| 3278077 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.81 | 67.0 | 6.04e-01 | 100.0% | 66.7% |
| 3933366 | 101.1.6.12 ↗ | alpha arrays › HTH › HTH › TrpR › HTH_23 | 0.81 | 70.0 | 5.92e-01 | 100.0% | 58.6% |
| 3693312 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.81 | 68.0 | 6.12e-01 | 100.0% | 73.3% |
| 4031756 | 101.1.2.645 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_40 | 0.80 | 68.0 | 5.45e-01 | 100.0% | 48.2% |
| 5002776 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.80 | 66.0 | 5.39e-01 | 97.6% | 50.0% |
| 4937081 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.80 | 67.0 | 5.92e-01 | 100.0% | 63.1% |
| 3753093 | 101.1.1.24 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N | 0.80 | 67.0 | 5.88e-01 | 100.0% | 64.6% |
| 5043001 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.80 | 66.0 | 5.04e-01 | 100.0% | 39.0% |
| 3565285 | 101.1.1.24 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N | 0.79 | 66.0 | 5.81e-01 | 100.0% | 63.1% |
| 3588657 | 101.1.1.101 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_40 | 0.79 | 68.0 | 6.43e-01 | 100.0% | 82.0% |
| 4995789 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.79 | 64.0 | 6.48e-01 | 97.6% | 97.5% |
| 4974140 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.78 | 66.0 | 5.01e-01 | 97.6% | 43.0% |
| 3971636 | 101.28.1.0 ↗ | alpha arrays › HTH › helical bundles in FlhC-like proteins › helical bundles in FlhC-like proteins | 0.78 | 63.0 | 6.40e-01 | 92.7% | 92.5% |
| 3983783 | 101.1.1.13 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 | 0.78 | 63.0 | 5.02e-01 | 100.0% | 51.6% |
| 4952293 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.78 | 63.0 | 6.44e-01 | 95.1% | 95.0% |
| 4964802 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.78 | 65.0 | 5.90e-01 | 100.0% | 68.3% |
| 3981529 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.78 | 65.0 | 6.06e-01 | 100.0% | 74.5% |
| 3932988 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.78 | 64.0 | 5.90e-01 | 100.0% | 72.7% |
| 4659976 | 101.1.1.25 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF433 | 0.77 | 63.0 | 4.42e-01 | 100.0% | 34.3% |
| 3949663 | 101.1.1.307 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF3071 | 0.77 | 57.0 | 5.78e-01 | 87.8% | 85.0% |
| 3423772 | 4964.1.1.1 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › DNA_pol_A | 0.76 | 62.0 | 4.66e-01 | 100.0% | 36.5% |
| 3968886 | 101.1.1.77 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_50 | 0.75 | 62.0 | 5.39e-01 | 95.1% | 60.0% |
| 3592377 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 64.0 | 4.37e-01 | 100.0% | 47.3% |
| 4008959 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.74 | 58.0 | 5.44e-01 | 92.7% | 69.1% |
| 3603081 | 101.1.2.40 ↗ | alpha arrays › HTH › HTH › winged helix domain › CPSase_L_D3 | 0.74 | 60.0 | 5.05e-01 | 95.1% | 89.3% |
| 5013240 | 101.1.2.674 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF29648 | 0.71 | 58.0 | 4.76e-01 | 100.0% | 48.2% |
| 4969117 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.69 | 52.0 | 3.99e-01 | 85.4% | 37.0% |
D2
high
residues 52-162
Domain cluster:
representative
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1j5wA02 | 1.20.58.180 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Class II aaRS and biotin synthetases; domain 2 | 0.82 | 56.0 | 6.52e-01 | 70.3% | 100.0% |
| 1sziA02 | 1.20.120.340 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS | 0.80 | 55.0 | 5.06e-01 | 70.3% | 67.9% |
| 2gscC00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.79 | 54.0 | 5.49e-01 | 70.3% | 74.5% |
| 2qupA00 | 1.20.120.490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hypothetical protein TM1646-like domain | 0.75 | 52.0 | 5.07e-01 | 70.3% | 72.3% |
| 4adzA00 | 1.20.58.1000 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer | 0.74 | 54.0 | 5.89e-01 | 74.8% | 96.7% |
| 2crbA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.74 | 52.0 | 5.55e-01 | 73.0% | 83.5% |
| 1wfdA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.73 | 52.0 | 5.61e-01 | 73.0% | 87.1% |
| 2c5iT00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.73 | 50.0 | 5.40e-01 | 70.3% | 98.9% |
| 5j1hA01 | 1.20.58.1060 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.71 | 59.0 | 5.02e-01 | 90.1% | 84.1% |
| 1zoyD00 | 1.20.1300.10 | Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit | 0.71 | 49.0 | 5.15e-01 | 80.2% | 77.5% |
| 1a36A04 | 1.10.132.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.71 | 49.0 | 4.17e-01 | 71.2% | 53.1% |
| 4u7iA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.70 | 48.0 | 5.19e-01 | 70.3% | 95.7% |
| 3fnbA01 | 1.20.1440.110 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › acylaminoacyl peptidase | 0.70 | 48.0 | 4.82e-01 | 92.8% | 69.3% |
| 6jpaE00 | 1.20.140.150 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › | 0.70 | 53.0 | 4.60e-01 | 80.2% | 68.0% |
| 3rkgA02 | 1.20.58.340 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region | 0.69 | 52.0 | 4.60e-01 | 80.2% | 80.5% |
| 1r0dA00 | 1.20.1410.10 | Mainly Alpha › Up-down Bundle › I/LWEQ domain › I/LWEQ domain | 0.68 | 51.0 | 4.29e-01 | 80.2% | 97.9% |
| 2i0mA01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.67 | 51.0 | 5.22e-01 | 80.2% | 99.1% |
| 3syvA01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.66 | 47.0 | 3.59e-01 | 73.0% | 75.1% |
| 1w9rA00 | 1.20.58.440 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › choline binding protein A | 0.65 | 46.0 | 4.53e-01 | 77.5% | 68.1% |
| 3n2oA03 | 1.20.58.930 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.65 | 49.0 | 5.21e-01 | 94.6% | 90.6% |
| 3zgzA04 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.64 | 45.0 | 3.88e-01 | 99.1% | 45.8% |
| 1vcsA00 | 1.20.58.400 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins | 0.63 | 49.0 | 5.09e-01 | 82.0% | 94.1% |
| 2d4uB00 | 1.20.120.30 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Aspartate receptor, ligand-binding domain | 0.61 | 49.0 | 4.40e-01 | 86.5% | 69.0% |
| 4agsB04 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.61 | 46.0 | 4.33e-01 | 92.8% | 66.2% |
| 8fbnB01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.59 | 54.0 | 4.28e-01 | 100.0% | 52.7% |
| 4aifA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.59 | 52.0 | 4.77e-01 | 97.3% | 82.6% |
| 1exaA00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.58 | 42.0 | 3.29e-01 | 75.7% | 85.6% |
| 1kt1A03 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.57 | 50.0 | 4.51e-01 | 98.2% | 75.3% |
| 6bl6B01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.56 | 40.0 | 2.92e-01 | 73.0% | 94.6% |
| 3zdqA01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.55 | 46.0 | 3.35e-01 | 91.9% | 87.7% |
| 1orsC00 | 1.20.120.350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C | 0.55 | 46.0 | 4.43e-01 | 93.7% | 79.5% |
| 2xhsA00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.55 | 39.0 | 2.98e-01 | 72.1% | 56.4% |
| 1elrA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.54 | 43.0 | 4.09e-01 | 93.7% | 73.4% |
| 1zk8B02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.53 | 39.0 | 3.78e-01 | 99.1% | 66.7% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4200809 | 603.1.1.9 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › COG2p_C | 0.77 | 57.0 | 4.99e-01 | 76.6% | 61.3% |
| 3725161 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.76 | 61.0 | 6.02e-01 | 85.6% | 80.0% |
| 3810552 | 604.3.1.1 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › BAG | 0.76 | 58.0 | 6.08e-01 | 80.2% | 96.0% |
| 3625675 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.75 | 54.0 | 5.17e-01 | 73.9% | 74.4% |
| 3466334 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.74 | 52.0 | 4.95e-01 | 72.1% | 63.8% |
| 5083305 | 601.33.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › CHAD domain › CHAD domain › CHAD | 0.74 | 62.0 | 5.67e-01 | 90.1% | 73.8% |
| 5081366 | 601.33.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › CHAD domain › CHAD domain | 0.73 | 61.0 | 5.32e-01 | 90.1% | 71.5% |
| 3495501 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.73 | 53.0 | 3.71e-01 | 74.8% | 37.2% |
| 1713219 | 601.4.1.5 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains › HBM | 0.72 | 56.0 | 5.57e-01 | 81.1% | 84.1% |
| 3409714 | 604.3.1.1 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › BAG | 0.71 | 55.0 | 5.75e-01 | 81.1% | 96.0% |
| 3856780 | 109.4.1.30 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › FAT | 0.71 | 51.0 | 4.43e-01 | 74.8% | 66.5% |
| 3737997 | 4146.1.1.14 ↗ | alpha bundles › YqgQ-like › YqgQ-like › YqgQ-like › Sec5 | 0.71 | 49.0 | 4.83e-01 | 70.3% | 69.6% |
| 4605223 | 375.1.9.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Zinc-nucleated domain of serine integrase | 0.70 | 54.0 | 5.87e-01 | 82.0% | 100.0% |
| 5004483 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.70 | 48.0 | 5.35e-01 | 71.2% | 91.8% |
| 5052922 | 601.4.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains | 0.69 | 53.0 | 5.22e-01 | 82.0% | 74.2% |
| 3624728 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.68 | 49.0 | 5.43e-01 | 79.3% | 97.6% |
| 4954407 | 604.6.1.0 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain | 0.67 | 58.0 | 5.99e-01 | 94.6% | 98.1% |
| 3739242 | 3291.1.1.1 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 | 0.64 | 47.0 | 4.16e-01 | 77.5% | 83.0% |
| 3445635 | 3718.1.1.23 ↗ | alpha bundles › Flagellar protein fliT › Flagellar protein fliT › Flagellar protein fliT › ALMT | 0.62 | 56.0 | 5.54e-01 | 100.0% | 96.5% |
| 5008556 | 3843.1.1.0 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K | 0.62 | 37.0 | 4.14e-01 | 80.2% | 76.5% |
| 3466653 | 192.29.1.101 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › Rx_N | 0.61 | 45.0 | 4.49e-01 | 76.6% | 81.7% |
| 3231234 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.59 | 51.0 | 4.85e-01 | 94.6% | 93.8% |
| 3922855 | 109.24.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Helical domain in dedicator of cytokinesis protein 9 › Helical domain in dedicator of cytokinesis protein 9 › DHR-2_Lobe_A | 0.57 | 51.0 | 4.91e-01 | 94.6% | 84.0% |