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ON045087.1__UPU15956.1__X__00019

Bact-Vir

ON045087.1__UPU15956.1__X__00019

Identity

Accession:
ON045087 ↗
Kingdom:
phage

Quality

73.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-151
PDB
D2 high residues 175-232
PDB
Domain cluster: representative
CATH (48)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3a58A01 2.30.29.90 Mainly Beta › Roll › PH-domain like › 0.83 75.0 5.26e-01 100.0% 51.7%
3ovcA01 3.30.200.150 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › 0.70 58.0 5.44e-01 93.1% 91.5%
3hfqA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.70 61.0 3.78e-01 100.0% 27.1%
3lzhA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.69 57.0 4.90e-01 91.4% 100.0%
3sreA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.66 56.0 3.54e-01 100.0% 28.3%
6ctzA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.66 55.0 4.70e-01 93.1% 96.8%
3lmbA01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.63 53.0 4.00e-01 100.0% 82.8%
2x8fA02 2.40.128.10 Mainly Beta › Beta Barrel › Lipocalin › 0.63 52.0 4.60e-01 100.0% 89.5%
1jqpA01 2.40.128.80 Mainly Beta › Beta Barrel › Lipocalin › Cathepsin C, exclusion domain 0.62 50.0 4.20e-01 96.6% 87.5%
4u3qB00 2.40.128.640 Mainly Beta › Beta Barrel › Lipocalin › 0.62 51.0 4.37e-01 98.3% 56.6%
5iqaA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.62 50.0 4.40e-01 93.1% 100.0%
3u1wA02 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 50.0 4.85e-01 93.1% 89.4%
2otnB01 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.61 46.0 3.52e-01 82.8% 81.5%
4zgfA00 2.40.128.270 Mainly Beta › Beta Barrel › Lipocalin › 0.61 52.0 4.03e-01 100.0% 66.0%
2z0lA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.61 42.0 2.77e-01 75.9% 47.0%
1n7vA01 2.105.10.10 Mainly Beta › 3 Propeller › Pseudo beta propeller › Pseudo beta propeller 0.60 51.0 3.71e-01 100.0% 53.7%
1xn5A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.60 47.0 3.68e-01 96.6% 37.7%
5hy7B01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 49.0 3.06e-01 100.0% 30.3%
1ntyA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 45.0 3.61e-01 84.5% 53.2%
2cg7A01 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.59 40.0 4.32e-01 94.8% 93.5%
2w18A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 49.0 3.18e-01 100.0% 25.8%
2dfkC02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 40.0 3.11e-01 72.4% 35.5%
2ajrA01 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.58 44.0 3.04e-01 93.1% 94.0%
1wmiA00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.58 45.0 4.03e-01 89.7% 93.2%
1ehiA02 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.57 42.0 3.26e-01 100.0% 33.3%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 43.0 4.24e-01 89.7% 75.0%
4i8oA02 3.30.160.690 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Bacterial toxin RNase RnlA/LsoA, N repeated domain 0.57 44.0 3.90e-01 87.9% 62.2%
2e8eA00 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.57 49.0 3.83e-01 100.0% 65.9%
8es5A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.56 46.0 3.56e-01 93.1% 40.6%
3havA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 46.0 4.18e-01 100.0% 96.6%
2bhkA00 2.10.90.10 Mainly Beta › Ribbon › Cystine Knot Cytokines, subunit B › Cystine-knot cytokines 0.56 39.0 3.22e-01 74.1% 87.6%
3q6aB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.56 45.0 3.53e-01 93.1% 44.0%
4wqkA00 3.30.460.40 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › 0.56 43.0 3.08e-01 82.8% 39.4%
2xzmW01 3.10.290.10 Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › RNA-binding S4 domain 0.55 45.0 3.75e-01 100.0% 74.6%
1mhmA00 3.60.90.10 Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase 0.55 44.0 3.05e-01 100.0% 24.1%
3otxB01 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.55 42.0 2.88e-01 94.8% 97.1%
1lfoA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 43.0 3.52e-01 94.8% 43.3%
3nhqA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.54 42.0 3.52e-01 93.1% 65.5%
2eyqA05 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.54 38.0 3.87e-01 77.6% 78.0%
2hzmG01 3.30.310.180 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.54 39.0 3.28e-01 82.8% 43.5%
2zfdB00 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.54 42.0 3.48e-01 89.7% 46.6%
3ednA01 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.54 41.0 3.20e-01 82.8% 85.8%
3p8aA02 2.60.40.4320 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 40.0 3.56e-01 89.7% 54.4%
2yj6A02 3.40.1110.10 Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N 0.53 42.0 3.73e-01 94.8% 63.2%
1tg0A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 41.0 3.99e-01 89.7% 92.4%
2hx0A01 3.30.1330.80 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 0.52 41.0 3.26e-01 91.4% 68.2%
2j7qA00 3.90.70.120 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.52 42.0 2.90e-01 96.6% 63.6%
3azwA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.50 37.0 2.64e-01 86.2% 47.8%
ECOD (66)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3981776 301.8.1.1 a+b three layers › Bacillus chorismate mutase-like › 4'-phosphopantetheinyl transferase › 4'-phosphopantetheinyl transferase › ACPS 0.73 64.0 5.34e-01 100.0% 68.3%
3284924 5.1.3.48 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Gmad1 0.71 63.0 4.01e-01 100.0% 32.0%
3278725 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.70 61.0 3.81e-01 100.0% 25.7%
3591184 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.69 60.0 3.62e-01 100.0% 19.9%
3742050 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.69 61.0 3.74e-01 100.0% 24.5%
3200199 5.1.4.223 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RIC1_2nd 0.66 56.0 3.19e-01 100.0% 25.9%
4446397 5.1.4.100 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Med16_N 0.66 56.0 3.42e-01 100.0% 26.0%
4015043 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.65 53.0 4.35e-01 96.6% 91.6%
3711234 5.1.4.175 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT122_2nd 0.65 55.0 3.65e-01 100.0% 27.5%
3219425 5.1.3.238 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › PF29568 0.64 55.0 4.37e-01 100.0% 72.0%
4435421 5.1.4.271 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, PF30361 0.64 53.0 3.23e-01 100.0% 18.2%
3736971 5.1.3.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Arylesterase 0.64 53.0 3.31e-01 100.0% 24.9%
None 0.64 54.0 3.55e-01 100.0% 26.8%
5014147 4312.1.1.3 a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.63 45.0 4.10e-01 89.7% 55.0%
5012053 4.1.1.40 beta barrels › SH3 › SH3 › SH3 › FeoA 0.63 51.0 4.71e-01 87.9% 87.8%
3584223 5.1.5.64 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DCAF17 0.63 54.0 3.23e-01 100.0% 23.3%
4940663 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.63 56.0 4.62e-01 100.0% 59.0%
3580620 267.1.1.3 a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.63 55.0 3.92e-01 98.3% 42.3%
4482319 5.1.11.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › eIF2A 0.63 54.0 3.21e-01 100.0% 18.6%
3377868 206.1.1.28 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Haspin_kinase 0.63 46.0 2.90e-01 82.8% 37.1%
3178555 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.63 52.0 2.98e-01 100.0% 13.5%
3708696 267.1.1.3 a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.62 54.0 3.62e-01 100.0% 37.0%
3268245 4099.1.1.0 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.62 53.0 4.52e-01 100.0% 59.0%
3684031 7512.1.1.1 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDPGT 0.62 47.0 3.08e-01 84.5% 30.2%
5041872 4.1.1.40 beta barrels › SH3 › SH3 › SH3 › FeoA 0.62 50.0 4.58e-01 87.9% 85.3%
4938623 881.1.1.45 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PF26686 0.62 46.0 3.32e-01 82.8% 28.5%
5046375 3794.1.1.0 a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit 0.62 47.0 4.31e-01 86.2% 62.5%
5053600 331.3.1.11 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.61 48.0 3.79e-01 89.7% 39.2%
3862116 220.1.1.66 beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH 0.61 47.0 3.45e-01 84.5% 37.6%
4929056 3794.1.1.0 a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit 0.61 51.0 4.56e-01 91.4% 68.8%
1552185 9.1.1.26 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF4847 0.61 52.0 4.03e-01 100.0% 66.0%
4993341 4312.1.1.0 a+b two layers › RelE-like › RelE-like › RelE-like 0.61 51.0 4.83e-01 94.8% 100.0%
3278218 4312.1.1.0 a+b two layers › RelE-like › RelE-like › RelE-like 0.61 45.0 3.98e-01 82.8% 62.2%
4932458 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.60 43.0 2.73e-01 82.8% 14.9%
4127133 3794.1.1.3 a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit › ACCA_BT 0.60 52.0 4.00e-01 100.0% 85.7%
3170445 3794.1.1.3 a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit › ACCA_BT 0.60 49.0 3.86e-01 96.6% 84.3%
3968453 3953.1.1.2 a+b two layers › Csd3 N-terminal domain › Csd3 N-terminal domain › Csd3 N-terminal domain › Csd3_N2 0.60 50.0 4.04e-01 98.3% 65.0%
1318709 59.1.4.1 beta complex topology › triple barrel › triple barrel › TFIID subunits TAF1-TAF7 › TAFII55_N 0.60 48.0 3.35e-01 96.6% 37.6%
5018743 4.1.1.40 beta barrels › SH3 › SH3 › SH3 › FeoA 0.59 48.0 4.40e-01 87.9% 85.3%
5003161 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.59 51.0 3.45e-01 98.3% 87.3%
3699727 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 51.0 3.16e-01 100.0% 20.5%
3212280 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 49.0 3.05e-01 100.0% 18.0%
3606615 241.10.1.0 a+b two layers › Type III secretory system chaperone-like › GAS2 domain › GAS2 domain 0.59 47.0 4.29e-01 100.0% 73.3%
4460735 3264.1.1.0 0.59 45.0 3.35e-01 84.5% 31.6%
4026368 267.1.1.3 a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.58 50.0 3.47e-01 100.0% 36.3%
3782688 59.1.4.1 beta complex topology › triple barrel › triple barrel › TFIID subunits TAF1-TAF7 › TAFII55_N 0.58 48.0 3.55e-01 98.3% 49.1%
3276111 59.1.1.0 beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like 0.58 47.0 4.23e-01 96.6% 95.5%
4946203 3794.1.1.7 a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit › Biotin_lipoyl 0.58 42.0 3.92e-01 86.2% 60.0%
3270269 59.1.4.1 beta complex topology › triple barrel › triple barrel › TFIID subunits TAF1-TAF7 › TAFII55_N 0.58 47.0 3.53e-01 96.6% 52.1%
4609138 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.58 45.0 3.43e-01 91.4% 34.0%
3952469 3794.1.1.2 a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit › MCC_alpha_BT 0.57 48.0 3.77e-01 98.3% 73.8%
4047126 298.3.1.2 a+b two layers › FwdE/GAPDH domain-like › Serine dehydratase beta chain-like › Serine dehydratase beta chain-like › PGDH_inter 0.56 46.0 3.72e-01 100.0% 96.9%
3409489 59.1.1.6 beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like › TFIIIC_sub6 0.56 45.0 3.98e-01 94.8% 97.9%
3838557 298.3.1.2 a+b two layers › FwdE/GAPDH domain-like › Serine dehydratase beta chain-like › Serine dehydratase beta chain-like › PGDH_inter 0.56 43.0 3.58e-01 94.8% 92.0%
4021772 298.1.1.0 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 0.55 44.0 3.30e-01 89.7% 54.8%
3278906 324.1.1.1 a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC 0.55 41.0 3.11e-01 82.8% 52.5%
4966983 4312.1.1.0 a+b two layers › RelE-like › RelE-like › RelE-like 0.55 43.0 3.95e-01 89.7% 98.8%
3495285 331.18.1.4 a+b two layers › TBP-like › C-terminal TBP-like domain of Roc › C-terminal TBP-like domain of Roc › COR-B 0.55 44.0 3.31e-01 89.7% 35.3%
4187379 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.54 44.0 3.57e-01 98.3% 45.8%
4951171 809.1.1.0 a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP 0.54 41.0 3.98e-01 89.7% 74.3%
3889564 331.18.1.4 a+b two layers › TBP-like › C-terminal TBP-like domain of Roc › C-terminal TBP-like domain of Roc › COR-B 0.54 42.0 3.15e-01 91.4% 31.9%
169137 286.1.1.2 a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › PhzC-PhzF 0.54 41.0 3.22e-01 82.8% 87.8%
5048170 331.10.2.0 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase 0.53 43.0 3.94e-01 94.8% 67.5%
4312097 295.1.1.15 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › UPF0128 0.52 44.0 3.25e-01 100.0% 74.3%
6457 4111.1.1.2 a+b two layers › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › PCC 0.52 40.0 3.19e-01 89.7% 66.2%
4414198 4111.1.1.2 a+b two layers › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › PCC 0.51 40.0 3.16e-01 91.4% 64.3%
D3 high residues 299-350
PDB
Domain cluster: representative
CATH (37)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3triA02 1.10.3730.10 Mainly Alpha › Orthogonal Bundle › ProC C-terminal domain-like fold › ProC C-terminal domain-like 0.88 64.0 5.02e-01 76.9% 38.8%
3l9wA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.88 64.0 4.37e-01 76.9% 24.5%
1tj7A03 1.10.40.30 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) 0.86 57.0 5.10e-01 71.2% 50.7%
2i5uA00 1.10.10.630 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DnaD domain-like 0.85 64.0 5.58e-01 80.8% 74.0%
2ahrA02 1.10.3730.10 Mainly Alpha › Orthogonal Bundle › ProC C-terminal domain-like fold › ProC C-terminal domain-like 0.84 62.0 4.85e-01 78.8% 39.6%
4rocA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.83 65.0 5.12e-01 84.6% 57.3%
1yqgA02 1.10.3730.10 Mainly Alpha › Orthogonal Bundle › ProC C-terminal domain-like fold › ProC C-terminal domain-like 0.82 59.0 4.57e-01 76.9% 36.3%
2fnaA02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.78 67.0 6.01e-01 100.0% 68.4%
3l6gA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.76 62.0 4.38e-01 88.5% 88.0%
2ivxB02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.75 58.0 4.52e-01 84.6% 49.6%
3c3dA02 1.10.8.240 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › CofD-like domain 0.75 58.0 4.90e-01 84.6% 100.0%
2kjgA00 1.20.120.970 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.75 51.0 4.06e-01 71.2% 43.4%
4yzgA00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.73 59.0 3.64e-01 90.4% 51.7%
3fkeA01 1.10.8.950 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Filoviridae VP35, C-terminal inhibitory domain, helical subdomain 0.71 54.0 4.89e-01 82.7% 93.0%
7s0rB01 1.20.81.20 Mainly Alpha › Up-down Bundle › Receptor-associated Protein › 0.71 61.0 5.40e-01 98.1% 96.1%
3bhgA01 1.10.275.10 Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) 0.70 55.0 4.38e-01 90.4% 71.3%
3jr7A01 3.40.50.10440 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Dihydroxyacetone kinase; domain 1 0.70 53.0 4.17e-01 86.5% 98.3%
3e22A03 1.10.287.600 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.69 49.0 4.87e-01 75.0% 81.5%
4jndA01 1.10.1740.220 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › 0.69 47.0 3.49e-01 71.2% 55.4%
4kxfB02 1.10.1900.50 Mainly Alpha › Orthogonal Bundle › c-terminal domain of poly(a) binding protein › 0.69 50.0 4.95e-01 80.8% 89.5%
4e6nA02 6.10.140.1010 Special › Helix non-globular › Helix Hairpins › 0.66 48.0 4.42e-01 76.9% 62.1%
1pjqA03 1.10.8.210 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Sirohaem synthase, dimerisation domain 0.65 49.0 4.61e-01 80.8% 86.2%
2q0yA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.65 43.0 3.22e-01 71.2% 25.4%
3tjmA02 1.10.1470.20 Mainly Alpha › Orthogonal Bundle › Protein Yjbj; Chain: A; › Fatty acid synthase; domain 2 0.65 48.0 4.06e-01 80.8% 46.7%
1cukA03 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.65 49.0 5.02e-01 82.7% 97.9%
4iggA01 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.65 47.0 4.33e-01 76.9% 83.6%
1jxhA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.64 56.0 3.60e-01 100.0% 52.8%
1lrzA03 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.64 46.0 4.37e-01 76.9% 90.3%
1oksA00 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.64 50.0 5.04e-01 86.5% 98.1%
4h8aB01 1.10.1530.10 Mainly Alpha › Orthogonal Bundle › Hypothetical Oxidoreductase Yiak; Chain: A, domain 1 › Malate/L-lactate/L-sulpholactate dehydrogenase, four-helix barrel 0.63 50.0 4.86e-01 94.2% 96.7%
2whnA00 1.20.81.30 Mainly Alpha › Up-down Bundle › Receptor-associated Protein › Type II secretion system (T2SS), domain F 0.61 48.0 3.94e-01 94.2% 43.6%
1r4gA00 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.59 43.0 4.30e-01 82.7% 94.3%
2el7A02 1.10.240.10 Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase 0.58 48.0 3.97e-01 92.3% 89.4%
1v9mA02 1.20.1690.10 Mainly Alpha › Up-down Bundle › V-type ATP synthase subunit C fold › V-type ATP synthase subunit C domain 0.57 43.0 3.56e-01 84.6% 47.5%
5ywwA01 3.40.50.1010 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease 0.57 45.0 3.51e-01 86.5% 87.0%
1ks9A02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.56 43.0 3.27e-01 82.7% 48.8%
2cu2A00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.55 40.0 2.50e-01 80.8% 74.0%
ECOD (44)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4990440 2484.1.1.330 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF460 0.91 66.0 4.54e-01 78.8% 25.0%
3188842 129.1.1.15 alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › P5CR_dimer 0.85 63.0 4.68e-01 78.8% 34.4%
3970102 4953.1.1.0 beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like 0.85 58.0 4.82e-01 71.2% 43.5%
3890174 5041.1.1.0 extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C 0.84 58.0 4.64e-01 71.2% 38.9%
3587414 129.1.1.15 alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › P5CR_dimer 0.83 62.0 4.83e-01 78.8% 40.0%
3297516 4953.1.1.4 beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › ASL_C2 0.83 57.0 4.74e-01 71.2% 43.5%
3255785 129.1.1.15 alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › P5CR_dimer 0.81 59.0 4.60e-01 78.8% 39.1%
3344802 6158.1.1.0 alpha bundles › Nucleoporin p58/p45 helical region › Nucleoporin p58/p45 helical region › Nucleoporin p58/p45 helical region 0.81 57.0 5.31e-01 76.9% 60.0%
3010699 3276.1.1.0 alpha arrays › N-terminal domain in MogR repressor › N-terminal domain in MogR repressor › N-terminal domain in MogR repressor 0.80 56.0 5.38e-01 75.0% 63.9%
4248743 103.1.1.6 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › RuvA_C 0.80 60.0 5.37e-01 78.8% 58.6%
4990523 129.1.1.15 alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › P5CR_dimer 0.80 58.0 4.66e-01 76.9% 41.1%
4991554 5065.1.1.1 alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › ABC-3 0.80 70.0 4.28e-01 96.2% 29.1%
5011845 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.78 65.0 5.85e-01 96.2% 69.3%
3643079 103.1.1.0 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.78 67.0 6.13e-01 100.0% 74.3%
3927239 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.78 53.0 5.21e-01 71.2% 67.3%
3927241 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.77 51.0 5.27e-01 71.2% 72.0%
3243227 198.1.1.0 alpha arrays › Saposin-like › Saposin-like › Saposin-like 0.77 57.0 5.12e-01 78.8% 58.6%
4989584 7523.1.1.17 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › OpuAC 0.76 62.0 4.32e-01 88.5% 85.0%
3602781 103.1.1.0 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.76 51.0 5.20e-01 76.9% 74.0%
147067 3276.1.1.1 alpha arrays › N-terminal domain in MogR repressor › N-terminal domain in MogR repressor › N-terminal domain in MogR repressor › MogR_DNAbind 0.75 53.0 5.04e-01 76.9% 62.5%
3590486 7523.1.1.17 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › OpuAC 0.75 61.0 4.25e-01 88.5% 83.1%
3972927 7523.1.1.17 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › OpuAC 0.74 60.0 4.22e-01 88.5% 87.7%
4968261 5060.2.1.1 alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › T2SSF 0.70 61.0 4.60e-01 98.1% 45.6%
2724457 103.1.1.6 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › RuvA_C 0.70 53.0 5.47e-01 84.6% 95.8%
5076097 1076.1.1.0 alpha bundles › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related 0.69 60.0 4.15e-01 98.1% 52.9%
4988048 3788.1.1.0 alpha bundles › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr) 0.69 54.0 5.24e-01 88.5% 90.0%
4928778 3317.1.1.0 alpha arrays › KorB C-terminal domain-like › KorB C-terminal domain › KorB C-terminal domain 0.69 53.0 5.07e-01 84.6% 78.3%
2407303 2005.1.1.25 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › HIGH_NTase1 0.69 48.0 3.03e-01 75.0% 14.3%
3444627 103.1.1.30 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › GIP1_N 0.69 50.0 5.14e-01 86.5% 86.0%
2581429 633.6.1.0 alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like 0.68 47.0 4.56e-01 73.1% 98.3%
4855020 1188.1.1.1 alpha bundles › ZIP zinc transporter › ZIP zinc transporter › ZIP zinc transporter › Zip 0.67 59.0 3.95e-01 100.0% 43.7%
4203362 181.1.1.15 alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › PF29197 0.67 49.0 4.87e-01 78.8% 90.9%
3203055 2003.6.1.0 a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like 0.66 52.0 3.37e-01 86.5% 24.2%
4075804 3317.1.1.0 alpha arrays › KorB C-terminal domain-like › KorB C-terminal domain › KorB C-terminal domain 0.63 46.0 4.60e-01 82.7% 89.1%
2325442 181.1.1.1 alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54_N 0.63 50.0 4.98e-01 98.1% 94.8%
4157292 3317.1.1.2 alpha arrays › KorB C-terminal domain-like › KorB C-terminal domain › KorB C-terminal domain › HTH_ParB 0.62 48.0 4.71e-01 92.3% 86.7%
3732279 103.12.1.0 alpha arrays › RuvA-C › ANTAR domain › ANTAR domain 0.62 43.0 4.15e-01 73.1% 80.0%
4995676 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.62 52.0 4.73e-01 94.2% 75.7%
5060990 2005.1.1.18 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase 0.62 46.0 2.94e-01 82.7% 26.7%
5054064 7014.1.1.1 alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › BacA 0.61 53.0 4.02e-01 100.0% 56.2%
3598 632.3.1.1 alpha bundles › immunoglobulin/albumin-binding domain-like › Phosphoprotein XD domain › Phosphoprotein XD domain › Paramyxo_P 0.59 43.0 4.30e-01 82.7% 94.3%
4973231 304.48.1.20 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Thg1 0.59 50.0 3.28e-01 98.1% 38.3%
3500053 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.59 43.0 3.40e-01 86.5% 40.0%
136810 632.3.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Phosphoprotein XD domain › Phosphoprotein XD domain 0.53 37.0 3.93e-01 75.0% 90.9%