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ON107264.1__UOX38334.1__X__00196

Bact-Vir

ON107264.1__UOX38334.1__X__00196

Identity

Accession:
ON107264 ↗
Kingdom:
phage

Quality

83.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Spbetavirus› Bacillus_phage_BUCT083

TaxID: 2930333

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-70
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3k3oA02 1.20.58.1360 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.57 40.0 3.82e-01 91.4% 63.1%
1e7uA05 1.10.1070.11 Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › Phosphatidylinositol 3-/4-kinase, catalytic domain 0.50 41.0 3.11e-01 95.7% 71.7%
3d36B02 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.50 36.0 3.78e-01 84.3% 86.9%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3729389 192.8.1.0 ↗ alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.56 41.0 3.25e-01 78.6% 56.1%
3573605 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.54 39.0 3.01e-01 78.6% 85.7%
4818504 325.1.7.2 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › RNA_pol_Rpb2_6 0.53 40.0 3.23e-01 88.6% 40.0%
D2 medium residues 88-184
PDB
Domain cluster: representative
CATH (36)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1irxA05 1.10.10.350 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.62 42.0 4.34e-01 79.4% 73.1%
3o60A00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.61 47.0 3.87e-01 82.5% 67.0%
3lwjA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.61 48.0 3.92e-01 86.6% 75.6%
4m0mA03 1.20.1270.430 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.60 36.0 3.93e-01 76.3% 72.2%
1dd5A01 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.60 44.0 4.24e-01 76.3% 88.1%
1j09A05 1.10.10.350 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.59 41.0 4.18e-01 80.4% 71.4%
3dpjF00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.58 45.0 3.68e-01 83.5% 77.1%
2d2sA02 1.20.58.1220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Exo84p, C-terminal helical domain 0.58 46.0 4.57e-01 87.6% 95.0%
3pasA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.58 44.0 3.64e-01 83.5% 74.7%
1t5oA01 1.20.120.420 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 0.57 37.0 3.30e-01 78.4% 44.0%
2dg8D00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.57 44.0 3.74e-01 84.5% 78.6%
5u56A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.57 40.0 3.90e-01 79.4% 65.2%
3fbzA01 1.20.58.800 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.57 41.0 4.11e-01 77.3% 73.5%
3nuwA02 3.30.420.310 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 2-keto-3-deoxy-galactonokinase, C-terminal domain 0.56 46.0 3.61e-01 88.7% 69.3%
3crjC00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.55 42.0 3.56e-01 84.5% 77.1%
2oerA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.55 42.0 3.53e-01 83.5% 60.9%
5mlc900 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.55 40.0 3.87e-01 75.3% 88.8%
2d2mD00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.54 41.0 3.68e-01 83.5% 70.3%
6i3mE01 1.20.120.420 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 0.54 41.0 3.73e-01 82.5% 77.4%
2wauA01 1.20.1310.20 Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Duffy-antigen binding domain 0.54 42.0 3.64e-01 84.5% 86.5%
4oydB00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.54 38.0 3.63e-01 74.2% 88.0%
4bwcA02 1.10.439.20 Mainly Alpha › Orthogonal Bundle › Penicillin Amidohydrolase; domain 1 › Phospholipase B-like, domain 2 0.53 40.0 3.79e-01 79.4% 81.2%
4it4A02 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.53 36.0 3.72e-01 74.2% 74.7%
1kplA00 1.10.3080.10 Mainly Alpha › Orthogonal Bundle › Clc chloride channel › Clc chloride channel 0.53 40.0 2.65e-01 80.4% 66.0%
1nzeA00 1.20.120.290 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Oxygen-evolving enhancer protein 3 (PsbQ), four-helix up-down bundle 0.53 38.0 3.65e-01 75.3% 65.2%
3a11B01 1.20.120.420 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 0.53 42.0 3.90e-01 86.6% 72.0%
2uvaG01 1.20.1050.120 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.53 39.0 3.61e-01 81.4% 62.5%
1o5hA00 1.20.120.680 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Formiminotetrahydrofolate cyclodeaminase monomer, up-and-down helical bundle 0.53 43.0 3.51e-01 91.8% 73.5%
6a3kA00 1.20.120.10 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562 0.52 33.0 3.10e-01 89.7% 48.8%
3u8vA00 1.20.120.660 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain 0.52 31.0 3.30e-01 81.4% 67.5%
3v5uA02 1.20.1420.30 Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › NCX, central ion-binding region 0.51 40.0 3.15e-01 85.6% 87.8%
1wn0A00 1.20.120.160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain 0.51 40.0 3.65e-01 84.5% 79.4%
2jx0A00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.51 38.0 3.54e-01 81.4% 60.3%
2bduA02 1.10.150.340 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Pyrimidine 5'-nucleotidase (UMPH-1), N-terminal domain 0.51 35.0 3.86e-01 71.1% 98.6%
1xzpA02 1.20.120.430 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › tRNA modification GTPase MnmE domain 2 0.51 36.0 3.11e-01 76.3% 58.4%
2vvwA00 1.10.437.20 Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › dsDNA poxvirus 0.50 44.0 3.88e-01 100.0% 67.3%
ECOD (42)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3589723 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.66 48.0 4.41e-01 76.3% 73.6%
3792754 621.1.1.7 ↗ alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › EMC6 0.64 46.0 4.21e-01 74.2% 61.6%
3580470 4044.1.1.15 ↗ alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › EMC6 0.64 46.0 4.27e-01 74.2% 64.2%
4883379 601.3.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain › Hpt 0.57 41.0 3.57e-01 75.3% 75.8%
3841137 109.4.1.662 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MEKK4_N 0.56 46.0 3.61e-01 90.7% 87.7%
3285842 5050.1.1.0 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter 0.56 39.0 3.21e-01 72.2% 86.3%
2808456 3651.1.1.1 ↗ alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › IF-2B 0.55 41.0 4.04e-01 80.4% 73.1%
3616195 603.1.1.148 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Keratin_assoc 0.55 39.0 3.88e-01 74.2% 85.4%
3940780 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.55 40.0 4.03e-01 78.4% 91.0%
3500773 3832.1.1.1 ↗ alpha bundles › Tumor necrosis factor alpha-induced protein 8-like protein 2 › Tumor necrosis factor alpha-induced protein 8-like protein 2 › Tumor necrosis factor alpha-induced protein 8-like protein 2 › DUF758 0.55 38.0 3.19e-01 72.2% 76.6%
3363017 601.1.1.51 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › IPGAL1_C 0.54 44.0 3.85e-01 89.7% 75.8%
3616211 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.54 43.0 3.72e-01 88.7% 67.5%
3519561 3651.1.1.0 ↗ alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain 0.53 41.0 3.81e-01 84.5% 77.7%
3684493 109.4.1.213 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › FancD2 0.53 42.0 2.98e-01 88.7% 52.6%
3202341 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.53 47.0 3.48e-01 96.9% 86.5%
3870558 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.53 38.0 3.57e-01 75.3% 82.5%
3906077 109.4.1.14 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MyTH4 0.53 45.0 3.58e-01 100.0% 75.6%
54459 601.3.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain 0.53 40.0 3.63e-01 88.7% 57.6%
4768204 101.8.1.2 ↗ alpha arrays › HTH › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › Anticodon_2 0.53 42.0 3.79e-01 86.6% 61.3%
3240466 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.53 38.0 3.83e-01 75.3% 85.3%
3311111 601.3.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain 0.53 41.0 3.64e-01 87.6% 57.3%
3369650 601.3.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain 0.53 40.0 3.52e-01 87.6% 53.3%
3857249 1134.1.1.10 ↗ alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain › NTP_transf_7 0.53 42.0 3.92e-01 88.7% 88.8%
3208120 633.23.1.22 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin › MARVEL 0.52 39.0 3.37e-01 78.4% 60.6%
3563679 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.52 37.0 3.71e-01 76.3% 81.9%
3902312 3651.1.1.1 ↗ alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › IF-2B 0.52 42.0 3.76e-01 89.7% 64.1%
3927845 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.52 38.0 3.54e-01 78.4% 70.0%
5047422 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.52 37.0 3.69e-01 75.3% 81.0%
5079648 601.28.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › VPS28 C-terminal domain-like › VPS28 C-terminal domain-like 0.52 38.0 3.96e-01 76.3% 97.8%
5070237 150.1.1.0 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin 0.52 40.0 4.11e-01 81.4% 88.9%
3354384 601.3.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain 0.52 40.0 3.65e-01 87.6% 60.7%
4971986 3651.1.1.1 ↗ alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › IF-2B 0.52 40.0 3.92e-01 85.6% 78.2%
3933605 3651.1.1.0 ↗ alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain 0.52 41.0 3.70e-01 88.7% 75.9%
3347220 601.1.1.51 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › IPGAL1_C 0.52 39.0 3.20e-01 83.5% 64.0%
3388595 109.3.1.163 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_4, Ank_5 0.51 43.0 3.13e-01 93.8% 48.3%
3518320 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.51 37.0 3.62e-01 78.4% 85.5%
4003767 603.1.1.136 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › HB_ELP1 0.51 41.0 3.47e-01 89.7% 90.6%
3600683 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.51 37.0 3.58e-01 77.3% 78.2%
3909538 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.51 37.0 3.65e-01 78.4% 89.4%
4973584 604.3.1.51 ↗ alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › 8xMP 0.50 37.0 3.87e-01 78.4% 90.9%
3626530 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.50 36.0 3.69e-01 76.3% 86.3%
3212271 601.4.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains 0.50 36.0 3.19e-01 76.3% 64.9%
D3 medium residues 186-230
PDB
Domain cluster: rep: IMGVR_UViG_3300033998_000398-3300033998-Ga0310133_000445_260_541__D7-46