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ON108641.1__UOW92765.1__SEA_ROBINROSE_22__00021

Bact-Vir

ON108641.1__UOW92765.1__SEA_ROBINROSE_22__00021

Identity

Accession:
ON108641 ↗
Kingdom:
phage

Quality

89.0 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-75
PDB
CATH (44)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1u5kA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.72 51.0 4.99e-01 97.3% 67.1%
3q8dA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.70 52.0 5.18e-01 98.6% 76.6%
2lmcB00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.69 50.0 5.40e-01 97.3% 91.8%
4g1vA02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.68 61.0 5.24e-01 100.0% 95.8%
1pxfA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.68 51.0 4.43e-01 100.0% 53.2%
2r6hA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.66 59.0 4.74e-01 100.0% 98.6%
1cqxA02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.65 58.0 5.09e-01 100.0% 94.6%
1qfjA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.65 59.0 5.49e-01 98.6% 94.5%
2gpjA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.65 59.0 5.29e-01 100.0% 98.0%
7ylrA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.65 57.0 5.09e-01 97.3% 100.0%
1tvcA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.64 58.0 5.09e-01 100.0% 90.8%
5ylyA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.64 58.0 5.03e-01 100.0% 94.6%
6k2lA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.64 57.0 5.00e-01 100.0% 96.4%
2piaA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.64 57.0 5.12e-01 100.0% 93.3%
2eixA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.63 57.0 5.06e-01 100.0% 94.3%
4wqmA02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.63 57.0 5.22e-01 100.0% 91.8%
1jb7A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.62 51.0 4.36e-01 100.0% 56.9%
4js8A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.61 34.0 3.20e-01 70.3% 42.7%
4jf8A00 3.10.450.230 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein 0.61 43.0 3.50e-01 74.3% 50.0%
1vq8B03 3.30.1430.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein L3; Chain: B; domain 2, › 0.61 48.0 4.26e-01 87.8% 100.0%
3nqzA01 3.10.450.490 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 45.0 4.17e-01 100.0% 63.7%
3pgbA03 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 42.0 3.66e-01 74.3% 62.9%
1a8pA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.60 53.0 4.89e-01 98.6% 96.8%
2xnjA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.59 52.0 4.71e-01 100.0% 98.1%
5jpnC02 2.40.50.120 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.59 51.0 4.01e-01 100.0% 45.9%
2f2hA01 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.58 52.0 3.60e-01 100.0% 93.5%
2m9vA00 2.40.50.960 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.57 44.0 3.47e-01 98.6% 37.6%
1qmnA01 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.57 39.0 3.11e-01 70.3% 63.6%
1jb7A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 49.0 3.79e-01 100.0% 50.0%
6lbrA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 49.0 3.63e-01 98.6% 57.4%
8gz3B01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.56 47.0 4.42e-01 94.6% 100.0%
3kztA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 40.0 3.29e-01 75.7% 47.7%
3rmhB00 2.40.50.810 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.55 48.0 4.02e-01 100.0% 70.7%
3q39B02 2.40.30.120 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses 0.54 47.0 4.18e-01 100.0% 97.3%
2dy1A02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.53 47.0 4.27e-01 95.9% 86.6%
1iyjB04 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 46.0 3.77e-01 100.0% 52.9%
3devA02 3.10.310.30 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › 0.53 39.0 3.43e-01 87.8% 51.7%
1uapA00 2.40.50.120 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.53 47.0 3.89e-01 100.0% 77.9%
4khbC00 2.30.29.210 Mainly Beta › Roll › PH-domain like › FACT complex subunit Spt16p/Cdc68p 0.52 42.0 3.83e-01 91.9% 89.6%
3qx3B03 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.52 42.0 3.80e-01 87.8% 78.0%
1r5bA02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.51 44.0 4.19e-01 97.3% 95.5%
4mt4A00 1.20.1600.10 Mainly Alpha › Up-down Bundle › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) 0.51 39.0 2.51e-01 89.2% 91.5%
2bm0A02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.50 43.0 3.92e-01 97.3% 84.5%
2yweA02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.50 42.0 3.89e-01 97.3% 92.0%
ECOD (78)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4505167 1.1.7.24 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_8 0.74 68.0 6.21e-01 98.6% 98.9%
4065350 2.1.1.57 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N 0.73 51.0 5.08e-01 95.9% 70.7%
4494130 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.72 66.0 5.90e-01 98.6% 97.0%
4053523 1.1.7.7 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.72 65.0 5.85e-01 98.6% 97.0%
4045594 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.70 51.0 5.16e-01 98.6% 77.3%
5054257 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.70 47.0 4.47e-01 100.0% 60.0%
3196006 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.69 62.0 4.96e-01 100.0% 90.3%
4115739 2.1.1.57 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N 0.69 52.0 5.11e-01 100.0% 75.0%
4346628 2.4.1.1 beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.69 51.0 4.21e-01 100.0% 43.7%
3190862 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.68 62.0 5.24e-01 100.0% 98.3%
3405824 1.1.7.7 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.68 62.0 5.21e-01 100.0% 90.0%
3969131 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.68 60.0 5.54e-01 98.6% 95.8%
4404198 2.1.1.57 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N 0.67 48.0 4.84e-01 98.6% 74.7%
4061526 1.1.7.7 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.67 61.0 5.52e-01 100.0% 97.0%
4204456 2.1.1.57 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N 0.67 51.0 4.97e-01 100.0% 75.0%
4212372 2.1.1.57 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N 0.67 50.0 4.96e-01 100.0% 75.0%
4425417 2.1.1.57 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N 0.67 50.0 4.95e-01 100.0% 75.0%
4886624 2.1.1.57 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N 0.67 50.0 4.88e-01 98.6% 73.8%
3180791 1.1.7.7 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.66 60.0 4.51e-01 100.0% 77.1%
4070256 2.1.1.57 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N 0.66 50.0 4.92e-01 100.0% 75.0%
3637819 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.66 60.0 5.08e-01 100.0% 97.5%
3110426 1.1.7.23 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_9 0.66 60.0 5.29e-01 100.0% 98.1%
3184022 1.1.7.7 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.66 59.0 4.89e-01 100.0% 97.7%
4396747 2.1.1.57 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N 0.66 48.0 4.76e-01 97.3% 72.5%
4183023 2.1.1.57 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N 0.66 50.0 4.89e-01 100.0% 75.0%
3442209 1.1.7.7 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.66 60.0 5.13e-01 100.0% 93.0%
5057694 1.1.7.7 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.66 59.0 5.37e-01 100.0% 97.0%
5049240 1.1.7.7 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.66 59.0 5.25e-01 100.0% 95.2%
4223333 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.66 60.0 5.28e-01 100.0% 93.3%
4074774 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.65 59.0 5.16e-01 100.0% 87.3%
4181458 1.1.7.7 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.65 59.0 5.15e-01 100.0% 90.9%
3284021 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.65 59.0 5.14e-01 100.0% 96.4%
2389026 1.1.7.7 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.65 59.0 5.33e-01 100.0% 96.0%
4207197 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.65 59.0 5.35e-01 100.0% 97.0%
4012402 1.1.7.7 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.65 58.0 4.97e-01 100.0% 94.2%
2455725 1.1.7.7 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.65 58.0 5.19e-01 100.0% 92.4%
4274108 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.65 58.0 5.20e-01 100.0% 94.3%
4423380 1.1.7.7 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.65 58.0 5.19e-01 100.0% 98.1%
4946101 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.65 58.0 5.16e-01 100.0% 92.4%
3945286 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.65 58.0 5.20e-01 100.0% 92.4%
3694265 1.1.7.7 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.65 58.0 4.76e-01 100.0% 79.3%
3744112 1.1.7.7 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.65 58.0 5.06e-01 100.0% 93.6%
3287089 1.1.7.23 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_9 0.65 58.0 4.76e-01 100.0% 95.6%
4091759 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.64 58.0 5.14e-01 100.0% 97.1%
2418866 1.1.7.23 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_9 0.64 58.0 5.02e-01 100.0% 98.2%
4444484 1.1.7.7 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.64 58.0 5.25e-01 100.0% 94.0%
3742942 1.1.7.7 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.64 57.0 5.21e-01 100.0% 96.0%
3254983 1.1.7.7 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.64 57.0 4.83e-01 100.0% 90.4%
4381190 1.1.7.7 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.64 58.0 5.15e-01 100.0% 90.5%
4492958 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.64 57.0 5.11e-01 100.0% 95.2%
4366786 1.1.7.7 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.64 57.0 5.04e-01 100.0% 87.3%
3185964 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.64 58.0 4.98e-01 100.0% 97.4%
3932819 1.1.7.7 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.64 57.0 4.96e-01 100.0% 94.8%
4200438 2.1.1.57 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N 0.64 47.0 4.69e-01 98.6% 75.0%
3974053 1.1.7.7 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.64 58.0 5.21e-01 100.0% 98.0%
4303291 1.1.7.7 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.63 57.0 5.18e-01 100.0% 90.0%
4208913 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.63 47.0 4.58e-01 97.3% 72.5%
4064427 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.63 55.0 5.20e-01 97.3% 95.6%
3234092 1.1.7.7 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.63 56.0 4.82e-01 98.6% 94.8%
3287262 1.1.7.7 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.63 56.0 5.01e-01 100.0% 88.6%
5034907 1.1.7.7 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.62 54.0 5.02e-01 100.0% 97.9%
3915698 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 40.0 3.87e-01 71.6% 92.9%
5025510 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.58 50.0 4.06e-01 95.9% 65.7%
3608101 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.57 48.0 4.47e-01 94.6% 86.3%
3871292 2.3.1.2 beta barrels › OB-fold › TIMP-like › TIMP-like › NTR 0.55 49.0 4.07e-01 100.0% 78.5%
3308866 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.55 46.0 3.92e-01 100.0% 97.0%
3905339 2.3.1.2 beta barrels › OB-fold › TIMP-like › TIMP-like › NTR 0.54 49.0 4.11e-01 100.0% 86.2%
3631248 220.1.1.20 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_TFIIH 0.53 43.0 3.72e-01 91.9% 60.8%
411 2.3.1.2 beta barrels › OB-fold › TIMP-like › TIMP-like › NTR 0.53 47.0 3.89e-01 100.0% 77.9%
3593930 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 42.0 3.66e-01 90.5% 59.2%
3637683 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 42.0 3.21e-01 91.9% 39.5%
4012866 236.1.1.0 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain 0.52 42.0 3.78e-01 100.0% 62.7%
3787819 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.52 42.0 3.75e-01 89.2% 66.7%
3476563 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 41.0 3.59e-01 90.5% 62.5%
4975157 298.1.1.0 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 0.52 42.0 3.24e-01 94.6% 69.3%
3975665 5085.1.1.1 a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › OEP 0.51 35.0 2.19e-01 71.6% 54.2%
4973090 330.2.1.0 a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) 0.50 41.0 3.80e-01 93.2% 76.0%
3870810 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.50 39.0 2.15e-01 90.5% 18.7%