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ON108645.1__UOW93097.1__SEA_NOSHOW_28__00028

Bact-Vir

ON108645.1__UOW93097.1__SEA_NOSHOW_28__00028

Identity

Accession:
ON108645 ↗
Kingdom:
phage

Quality

89.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-53
PDB
Domain cluster: representative
CATH (47)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7sf7A01 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.74 65.0 4.05e-01 100.0% 18.8%
3dfgA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 50.0 5.11e-01 82.0% 77.1%
6f7hA00 1.20.1080.10 Mainly Alpha › Up-down Bundle › Glycerol uptake facilitator protein › Glycerol uptake facilitator protein. 0.71 59.0 3.77e-01 100.0% 19.1%
3ousA00 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.71 59.0 4.98e-01 92.0% 85.4%
1lj8A02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.69 57.0 3.88e-01 100.0% 26.6%
2id3A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.69 50.0 5.11e-01 84.0% 79.6%
3mvpA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.68 48.0 4.96e-01 80.0% 78.7%
2fd5A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.68 49.0 5.02e-01 82.0% 81.2%
3bhqA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.67 55.0 3.79e-01 100.0% 25.7%
3npiB00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.66 54.0 3.69e-01 100.0% 24.3%
4v1gA00 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.66 54.0 4.73e-01 100.0% 60.0%
2x2vA00 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.66 57.0 5.21e-01 100.0% 79.4%
3c1dA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 45.0 4.70e-01 82.0% 80.4%
2fbqA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.65 53.0 3.57e-01 100.0% 22.5%
3f0cA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.65 46.0 4.70e-01 98.0% 77.6%
2zb9A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.65 49.0 4.93e-01 84.0% 80.0%
6ip0A01 2.60.120.650 Mainly Beta › Sandwich › Jelly Rolls › Cupin 0.64 51.0 3.17e-01 92.0% 78.4%
1b3qA01 1.10.287.560 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Histidine kinase CheA-like, homodimeric domain 0.63 53.0 4.97e-01 92.0% 77.4%
4h63H01 1.20.58.1710 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.63 52.0 4.66e-01 96.0% 65.3%
2xheA03 3.90.830.10 Alpha Beta › Alpha-Beta Complex › Syntaxin Binding Protein 1; Chain A, domain 2 › Sec1/Munc18 (SM) protein, domain 3a 0.63 54.0 4.14e-01 100.0% 52.1%
6y6hA02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.62 50.0 3.42e-01 96.0% 25.3%
3bvxA02 1.20.1270.50 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Glycoside hydrolase family 38, central domain 0.62 54.0 4.10e-01 96.0% 60.4%
2xokP00 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.62 52.0 4.65e-01 100.0% 67.6%
3pmiA02 6.10.300.20 Special › Helix non-globular › cAMP-dependent Protein Kinase, Chain A › 0.62 49.0 5.03e-01 98.0% 100.0%
1yg2A02 6.10.140.190 Special › Helix non-globular › Helix Hairpins › 0.61 47.0 3.89e-01 84.0% 52.2%
2f2bA00 1.20.1080.10 Mainly Alpha › Up-down Bundle › Glycerol uptake facilitator protein › Glycerol uptake facilitator protein. 0.61 49.0 3.27e-01 100.0% 21.6%
1cpcA00 1.10.490.20 Mainly Alpha › Orthogonal Bundle › Globin-like › Phycocyanins 0.61 51.0 3.67e-01 100.0% 64.8%
2gsvA00 6.10.140.40 Special › Helix non-globular › Helix Hairpins › 0.61 47.0 4.37e-01 98.0% 65.7%
2vd5B02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.60 53.0 3.56e-01 100.0% 91.7%
1f45B00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.60 52.0 3.85e-01 100.0% 53.4%
5ymrC00 3.20.70.20 Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › 0.59 52.0 2.82e-01 98.0% 47.4%
3id7A00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.58 50.0 2.98e-01 98.0% 28.6%
1x04A00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.58 51.0 3.41e-01 100.0% 71.0%
4a17U01 1.10.287.310 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.57 52.0 4.45e-01 100.0% 66.2%
4aflA00 6.10.140.1740 Special › Helix non-globular › Helix Hairpins › 0.57 48.0 3.84e-01 98.0% 47.1%
2kp8A00 1.20.5.170 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.57 49.0 4.38e-01 98.0% 75.0%
1zylA02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.57 45.0 3.34e-01 88.0% 72.4%
1irxA04 1.10.10.770 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.57 48.0 3.80e-01 98.0% 91.7%
3lphC00 6.10.140.630 Special › Helix non-globular › Helix Hairpins › 0.57 47.0 4.56e-01 100.0% 87.9%
2v40A02 1.10.300.10 Mainly Alpha › Orthogonal Bundle › Adenylosuccinate Synthetase, subunit A; domain 2 › Adenylosuccinate Synthetase, subunit A, domain 2 0.57 48.0 4.09e-01 100.0% 56.8%
3sjqC00 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.57 52.0 4.38e-01 100.0% 65.0%
2etnB01 1.10.287.180 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Transcription elongation factor, GreA/GreB, N-terminal domain 0.55 49.0 4.23e-01 100.0% 69.7%
3nbiA01 1.10.8.1020 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › RecQ-mediated genome instability protein 1, N-terminal domain 0.54 41.0 3.96e-01 82.0% 70.7%
1kqfC00 1.20.950.20 Mainly Alpha › Up-down Bundle › Fumarate Reductase Cytochrome B subunit › Transmembrane di-heme cytochromes, Chain C 0.54 43.0 2.86e-01 90.0% 21.8%
3ayhA00 1.20.1250.40 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › RNA Polymerase II, Rpb4 subunit 0.52 47.0 3.31e-01 96.0% 44.0%
1tt5C01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 43.0 2.70e-01 100.0% 19.4%
2m4eA00 1.20.120.1930 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein PF16691 family 0.50 43.0 3.57e-01 94.0% 73.3%
ECOD (53)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3207650 5076.1.1.1 alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr 0.78 66.0 4.00e-01 100.0% 15.2%
3976839 5069.1.3.0 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits 0.78 65.0 5.06e-01 100.0% 45.0%
3926793 5076.1.1.1 alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr 0.75 66.0 4.09e-01 100.0% 17.9%
3441893 5076.1.1.1 alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr 0.75 67.0 3.97e-01 100.0% 14.5%
3428080 5076.1.1.1 alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr 0.75 65.0 4.06e-01 100.0% 17.8%
3347927 5076.1.1.1 alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr 0.74 64.0 4.00e-01 100.0% 17.5%
3248805 5076.1.1.1 alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr 0.73 63.0 3.91e-01 100.0% 16.1%
3715420 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.73 64.0 4.89e-01 100.0% 43.5%
3585359 5076.1.1.1 alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr 0.73 63.0 3.92e-01 100.0% 16.7%
3492091 5063.1.1.16 alpha bundles › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Romo1 0.73 65.0 5.96e-01 100.0% 95.4%
3820491 601.30.1.0 alpha bundles › Four-helical up-and-down bundle › Helical bundle domain in hypothetical protein PH1320 › Helical bundle domain in hypothetical protein PH1320 0.72 62.0 4.64e-01 100.0% 40.0%
5055517 4953.1.1.0 beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like 0.72 63.0 4.59e-01 100.0% 80.7%
3692508 4120.1.1.0 few secondary structure elements › Tim10/DDP › Tim10/DDP › Tim10/DDP 0.72 63.0 5.04e-01 100.0% 52.0%
3436965 3711.1.1.0 alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein 0.71 63.0 5.09e-01 100.0% 55.8%
2832675 2006.1.4.8 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN_5 0.71 62.0 4.07e-01 100.0% 23.9%
3316538 5058.1.1.40 alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › PF26576 0.71 60.0 5.41e-01 100.0% 70.0%
4426201 5076.1.1.1 alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr 0.70 62.0 3.75e-01 100.0% 15.6%
4479861 310.2.1.77 a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › Leu_zip 0.70 61.0 4.69e-01 100.0% 44.3%
3936020 103.1.1.0 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.70 55.0 4.53e-01 100.0% 46.0%
3174080 6169.1.1.0 extended segments › Transmembrane segment of lysosome-associated membrane glycoprotein 2 › Transmembrane segment of lysosome-associated membrane glycoprotein 2 › Transmembrane segment of lysosome-associated membrane glycoprotein 2 0.69 61.0 5.03e-01 100.0% 63.3%
3568627 3755.3.1.312 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › Leu_zip 0.69 60.0 4.63e-01 100.0% 44.3%
3922405 3559.1.1.49 a+b complex topology › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 › Leu_zip 0.69 60.0 4.62e-01 100.0% 44.3%
3904823 150.3.1.0 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › 4-helical cytokines › 4-helical cytokine 0.67 60.0 4.12e-01 100.0% 88.8%
3961186 103.9.1.0 alpha arrays › RuvA-C › RanGAP2 N-terminal domain › RanGAP2 N-terminal domain 0.67 56.0 4.52e-01 100.0% 48.0%
4011947 5076.1.1.0 alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier 0.67 57.0 3.55e-01 100.0% 27.5%
4999074 4009.1.1.0 alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins 0.67 50.0 4.52e-01 96.0% 57.3%
140290 191.1.1.31 alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_29 0.66 55.0 4.08e-01 100.0% 35.7%
3981239 1049.2.1.3 alpha duplicates or obligate multimers › Baseplate wedge protein gp7 helical domain-like › Baseplate wedge protein gp6 helical domain › Baseplate wedge protein gp6 helical domain › PF26776 0.66 55.0 4.56e-01 98.0% 51.6%
3648224 142.1.1.0 alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.66 56.0 4.15e-01 100.0% 97.2%
3740910 1008.1.1.0 alpha bundles › BRCC36 C-terminal helical domain › BRCC36 C-terminal helical domain › BRCC36 C-terminal helical domain 0.66 58.0 5.63e-01 100.0% 90.9%
3897765 5059.1.1.0 alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter 0.65 52.0 3.72e-01 86.0% 39.3%
4602761 105.2.1.91 alpha duplicates or obligate multimers › HLH-like › Dimerization domain in LRIM1/APL1C › Dimerization domain in LRIM1/APL1C › SPICE 0.65 49.0 3.61e-01 88.0% 31.5%
4023485 192.15.1.0 alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains 0.64 51.0 3.63e-01 98.0% 27.1%
3252296 601.55.1.1 alpha bundles › Four-helical up-and-down bundle › anti-complement domain of BBK32 › anti-complement domain of BBK32 › NCA2 0.64 58.0 4.63e-01 100.0% 91.6%
3206612 4953.1.1.0 beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like 0.63 48.0 4.17e-01 84.0% 83.7%
5010630 6132.1.1.0 alpha bundles › Nudix hydrolase N-terminal dimerization domain › Nudix hydrolase N-terminal dimerization domain › Nudix hydrolase N-terminal dimerization domain 0.63 52.0 4.90e-01 100.0% 76.9%
3346951 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.63 55.0 3.92e-01 100.0% 33.5%
None 0.63 48.0 2.90e-01 96.0% 11.1%
3877645 5001.1.1.3 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_2 0.63 51.0 3.17e-01 94.0% 15.9%
3178655 174.1.1.21 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › DUF2417 0.62 52.0 3.58e-01 92.0% 73.5%
3271908 210.2.1.0 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain 0.62 54.0 3.43e-01 100.0% 21.3%
3964301 159.1.2.29 alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › DUF3418 0.62 51.0 3.44e-01 96.0% 29.4%
4303085 3755.3.1.467 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DRC7_C 0.61 54.0 4.04e-01 98.0% 45.8%
4173828 2500.1.1.0 a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel 0.60 52.0 2.83e-01 98.0% 46.1%
4178099 632.22.1.176 alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › PF27734 0.59 50.0 3.56e-01 96.0% 31.6%
3979725 3291.1.1.15 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › DUF2583 0.59 51.0 4.23e-01 98.0% 56.7%
3648687 604.12.1.89 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › CDP-OH_P_transf 0.58 52.0 4.18e-01 98.0% 52.6%
3945698 283.2.1.10 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › PF29514 0.58 50.0 4.00e-01 100.0% 80.8%
3360116 2004.1.1.56 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NB-ARC 0.57 42.0 2.93e-01 84.0% 20.5%
4662530 5040.1.1.1 extended segments › Cytochrome c oxidase subunit II-like, transmembrane region › Cytochrome c oxidase subunit II-like, transmembrane region › Cytochrome c oxidase subunit II-like, transmembrane region › COX2_TM 0.57 48.0 3.77e-01 100.0% 43.5%
5072599 873.1.1.0 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain 0.55 42.0 3.25e-01 94.0% 51.1%
4937503 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.54 43.0 3.20e-01 90.0% 35.6%
4324499 3755.1.1.3 alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related › SPAM 0.53 48.0 3.40e-01 100.0% 89.7%