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ON113168.1__UQT00209.1__EGEOBHOM_00050__00050

Bact-Vir

ON113168.1__UQT00209.1__EGEOBHOM_00050__00050

Identity

Accession:
ON113168 ↗
Kingdom:
phage

Quality

70.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-113
PDB
Domain cluster: representative
CATH (38)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ia7A00 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.74 46.0 4.67e-01 77.3% 62.2%
3a5zB01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.68 37.0 4.75e-01 81.8% 93.7%
3f6gA01 3.30.160.740 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.66 35.0 4.66e-01 73.6% 98.3%
3mcrA00 3.30.460.80 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit 0.65 38.0 3.43e-01 70.9% 42.2%
1ah5A03 3.30.160.40 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain 0.64 45.0 4.93e-01 93.6% 91.9%
1vp2A00 3.90.950.10 Alpha Beta › Alpha-Beta Complex › Maf protein › 0.64 52.0 4.41e-01 90.0% 95.2%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.64 35.0 4.38e-01 80.9% 92.1%
6s8zA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.64 35.0 4.46e-01 80.9% 95.2%
4k15A00 2.60.40.3860 Mainly Beta › Sandwich › Immunoglobulin-like › 0.63 37.0 3.44e-01 90.9% 44.9%
3i6eA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.62 44.0 4.58e-01 73.6% 100.0%
1whqA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.62 39.0 4.59e-01 82.7% 97.2%
3cpfA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.62 33.0 4.13e-01 83.6% 86.2%
4jhcB00 3.90.950.10 Alpha Beta › Alpha-Beta Complex › Maf protein › 0.62 50.0 4.26e-01 87.3% 92.9%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.62 34.0 4.24e-01 83.6% 87.0%
3ecrB03 3.30.160.40 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain 0.61 50.0 5.16e-01 96.4% 95.1%
3oyyA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.61 33.0 4.08e-01 80.9% 87.9%
3iq2A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.59 43.0 4.19e-01 76.4% 82.9%
2rs7A01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.59 37.0 4.33e-01 80.0% 94.6%
2xglA00 3.10.450.300 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › YebF/Colicin-M immunity protein 0.58 42.0 4.53e-01 88.2% 91.2%
2v14A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.57 45.0 4.21e-01 100.0% 67.9%
3ebwA01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 45.0 4.16e-01 88.2% 64.8%
3apuB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 40.0 3.48e-01 91.8% 46.5%
2rajA02 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.55 41.0 3.92e-01 77.3% 77.8%
1of5B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 47.0 4.48e-01 94.5% 98.4%
1lc0A02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.55 39.0 3.58e-01 97.3% 55.1%
4n6tA00 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 37.0 4.17e-01 90.9% 98.7%
3qkgA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 43.0 3.82e-01 86.4% 68.9%
1tltA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.54 38.0 3.22e-01 97.3% 43.0%
4q9cA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 35.0 3.56e-01 98.2% 67.6%
3nqhA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.53 45.0 3.28e-01 91.8% 33.7%
1q42A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 48.0 4.25e-01 100.0% 100.0%
4cgyA03 2.70.20.10 Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Topoisomerase I, domain 3 0.53 37.0 3.52e-01 77.3% 61.7%
6eugA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.52 44.0 3.11e-01 92.7% 31.1%
2bz0A00 3.40.50.10990 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › GTP cyclohydrolase II 0.52 37.0 3.25e-01 74.5% 56.5%
3obaA05 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.52 46.0 3.40e-01 99.1% 93.2%
1l3aA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.51 34.0 3.05e-01 80.0% 45.2%
2xzhA00 2.130.10.110 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Clathrin heavy-chain terminal domain 0.51 44.0 3.15e-01 96.4% 50.6%
2e3nA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.51 45.0 3.54e-01 97.3% 91.8%
ECOD (71)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3271234 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.83 34.0 5.38e-01 70.9% 97.8%
4558929 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.71 50.0 5.65e-01 92.7% 98.8%
4941364 330.2.1.0 a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) 0.71 54.0 5.52e-01 100.0% 83.8%
4946576 4272.1.1.1 a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa 0.69 39.0 3.31e-01 70.9% 34.5%
3175573 7504.1.1.5 a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › DUF5427 0.69 60.0 4.96e-01 96.4% 94.0%
4943930 4272.1.1.1 a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa 0.69 40.0 3.60e-01 70.9% 42.0%
4977528 4272.1.1.1 a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa 0.68 38.0 3.58e-01 70.9% 44.4%
4359254 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.68 45.0 5.27e-01 90.9% 100.0%
4965501 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.67 46.0 5.01e-01 91.8% 86.7%
4058654 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.66 47.0 4.89e-01 94.5% 80.8%
4460237 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.66 44.0 5.14e-01 90.0% 100.0%
4036906 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.66 43.0 4.92e-01 90.0% 92.5%
4161565 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.66 50.0 5.30e-01 92.7% 93.7%
4021911 7504.1.1.5 a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › DUF5427 0.65 56.0 4.86e-01 95.5% 94.3%
4975692 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.65 46.0 5.01e-01 94.5% 90.0%
5077178 512.1.1.0 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) 0.65 48.0 5.16e-01 99.1% 95.6%
4365325 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.65 41.0 4.50e-01 87.3% 81.2%
2698437 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.64 55.0 5.01e-01 92.7% 75.0%
4048220 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.64 41.0 4.67e-01 88.2% 88.7%
3643549 4.1.1.139 beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.63 36.0 4.08e-01 84.5% 75.0%
4026008 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.63 41.0 4.60e-01 84.5% 87.1%
4946993 4.1.1.479 beta barrels › SH3 › SH3 › SH3 › eIF-5a 0.63 35.0 4.27e-01 84.5% 85.7%
4950455 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.62 38.0 4.59e-01 82.7% 94.3%
4262169 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.62 46.0 4.90e-01 95.5% 93.5%
4609498 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.62 40.0 4.52e-01 87.3% 90.0%
3630103 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.62 37.0 3.56e-01 74.5% 50.0%
3585861 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.61 41.0 3.82e-01 83.6% 53.6%
3483489 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 34.0 4.02e-01 83.6% 80.0%
3937984 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.60 40.0 4.23e-01 84.5% 75.0%
4931072 4.1.1.139 beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.60 34.0 4.10e-01 83.6% 85.7%
2157301 4.1.1.78 beta barrels › SH3 › SH3 › SH3 › TTD 0.60 37.0 4.49e-01 87.3% 94.5%
3747453 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.59 45.0 4.16e-01 98.2% 62.9%
3736443 2003.1.2.5 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like 0.59 41.0 2.91e-01 71.8% 65.1%
5047088 5.1.2.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.59 40.0 3.22e-01 78.2% 35.5%
4997059 4.1.1.139 beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.59 34.0 4.06e-01 83.6% 85.3%
5004087 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.58 41.0 4.61e-01 86.4% 98.8%
3520847 243.5.1.0 a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region 0.58 41.0 4.65e-01 94.5% 100.0%
4954368 3692.1.1.1 a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › OCD_Mu_crystall 0.58 40.0 3.78e-01 100.0% 56.4%
4336471 264.2.1.0 beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.58 37.0 3.94e-01 77.3% 72.0%
4022211 2003.1.2.6 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like,NAD_binding_8 0.57 39.0 2.76e-01 70.0% 65.9%
3602244 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.57 45.0 4.13e-01 83.6% 73.6%
4942589 4.1.1.139 beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.57 33.0 3.97e-01 80.9% 88.6%
4137393 330.1.1.4 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Rad52_Rad22 0.57 38.0 3.49e-01 80.9% 50.0%
2524073 3692.1.1.1 a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › OCD_Mu_crystall 0.57 34.0 3.44e-01 87.3% 57.1%
3246928 7579.1.1.14 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Lipase_3 0.57 44.0 3.21e-01 80.9% 92.3%
3622698 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.57 44.0 3.07e-01 91.8% 26.5%
3774525 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.56 41.0 3.50e-01 76.4% 53.3%
3938274 2003.1.3.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain 0.56 39.0 3.15e-01 70.9% 95.6%
3281179 3692.1.1.1 a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › OCD_Mu_crystall 0.56 39.0 3.69e-01 100.0% 59.3%
4134185 3692.1.1.1 a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › OCD_Mu_crystall 0.55 42.0 3.90e-01 98.2% 64.0%
3925101 5.1.3.99 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FG-GAP_3 0.55 48.0 3.22e-01 95.5% 48.9%
3926862 243.3.1.36 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Herpes_UL52 0.55 45.0 4.36e-01 90.0% 80.0%
3593482 2.1.1.135 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF3592 0.54 39.0 4.12e-01 78.2% 83.0%
3626463 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.54 42.0 3.15e-01 80.0% 93.7%
3993718 3256.1.1.0 a+b two layers › DUF2233 N-terminal domain › DUF2233 N-terminal domain › DUF2233 N-terminal domain 0.54 36.0 4.21e-01 83.6% 100.0%
3176281 896.1.1.3 a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › SRP9-21 0.54 30.0 3.54e-01 70.0% 78.7%
3096198 3692.1.1.0 a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain 0.54 34.0 3.45e-01 88.2% 63.9%
3436853 5.1.3.54 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF1668 0.53 46.0 3.30e-01 95.5% 48.4%
4408843 3692.1.1.1 a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › OCD_Mu_crystall 0.53 42.0 3.85e-01 98.2% 64.1%
139998 5.1.2.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_43 0.53 45.0 3.27e-01 91.8% 33.6%
4962576 3692.1.1.1 a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › OCD_Mu_crystall 0.53 41.0 3.73e-01 99.1% 62.1%
4983936 3692.1.1.1 a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › OCD_Mu_crystall 0.52 39.0 3.71e-01 99.1% 65.2%
3928239 7579.1.1.14 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Lipase_3 0.52 39.0 2.86e-01 79.1% 92.7%
3485727 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.52 38.0 4.03e-01 76.4% 97.9%
4943345 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 38.0 3.96e-01 75.5% 85.0%
4014670 11.8.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Osmotin-like › Osmotin-like 0.52 44.0 4.05e-01 94.5% 78.7%
4023264 3692.1.1.0 a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain 0.51 39.0 3.46e-01 80.0% 76.9%
3593276 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 37.0 3.64e-01 92.7% 68.0%
3312525 5.1.2.26 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_32N+INV_N 0.51 44.0 3.10e-01 95.5% 30.0%
4997289 3692.1.1.1 a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › OCD_Mu_crystall 0.51 34.0 3.31e-01 94.5% 61.0%
3809890 331.3.1.28 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF220 0.50 44.0 3.51e-01 97.3% 87.1%