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ON113170.1__UQT00690.1__JEFDOCMN_00152__00127

Bact-Vir

ON113170.1__UQT00690.1__JEFDOCMN_00152__00127

Identity

Accession:
ON113170 ↗
Kingdom:
phage

Quality

89.3 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-76
PDB
D2 high residues 83-218
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00692.25 best dUTPase 23.9 4.20e-05 71.3% 62.8%
CATH (24)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1sixA00 2.70.40.10 Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) 0.90 69.0 6.58e-01 86.0% 69.9%
3ecyA00 2.70.40.10 Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) 0.87 61.0 6.55e-01 86.0% 81.5%
5y5qC00 2.70.40.10 Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) 0.86 66.0 6.58e-01 86.0% 76.4%
2d4lA01 2.70.40.10 Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) 0.85 60.0 6.84e-01 84.6% 92.5%
4ao5B01 2.70.40.10 Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) 0.85 64.0 6.96e-01 86.0% 90.6%
1euwA00 2.70.40.10 Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) 0.83 67.0 6.77e-01 86.0% 83.1%
3h6xB00 2.70.40.10 Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) 0.83 69.0 7.05e-01 86.0% 88.5%
3zf0A00 2.70.40.10 Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) 0.81 68.0 6.57e-01 86.0% 84.6%
3t64A01 2.70.40.10 Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) 0.78 65.0 6.51e-01 86.0% 87.0%
6lj3A01 2.70.40.10 Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) 0.77 62.0 6.13e-01 86.0% 80.3%
2v1rA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 23.0 3.24e-01 76.5% 56.7%
3oymA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 20.0 2.83e-01 75.7% 47.1%
4krtB03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 21.0 3.03e-01 76.5% 52.2%
2digA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 20.0 2.93e-01 76.5% 51.5%
1pkhB00 2.70.40.10 Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) 0.68 56.0 5.12e-01 86.0% 82.9%
3d6wB02 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.65 21.0 3.76e-01 77.9% 100.0%
1eqtA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.63 23.0 3.20e-01 79.4% 65.7%
1eigA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.62 24.0 3.22e-01 79.4% 65.8%
2hbpA00 2.30.30.700 Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 0.57 24.0 3.48e-01 80.9% 83.3%
3q48B01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 40.0 4.45e-01 85.3% 100.0%
1l3wA05 2.60.40.60 Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins 0.53 40.0 4.41e-01 97.1% 100.0%
2qetA02 4.10.470.10 Few Secondary Structures › Irregular › Ricin (A Subunit), domain 2 › Ricin (A Subunit), domain 2 0.51 25.0 3.14e-01 96.3% 76.5%
3ktzA02 4.10.470.10 Few Secondary Structures › Irregular › Ricin (A Subunit), domain 2 › Ricin (A Subunit), domain 2 0.50 25.0 3.12e-01 96.3% 75.9%
3wdhA01 2.60.40.2320 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 33.0 3.77e-01 94.1% 93.8%
ECOD (51)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2793462 70.2.1.1 beta barrels › beta-clip › dUTPase-like › dUTPase-like › dUTPase 0.89 67.0 6.94e-01 86.0% 81.9%
27204 70.2.1.1 beta barrels › beta-clip › dUTPase-like › dUTPase-like › dUTPase 0.89 68.0 6.94e-01 86.0% 79.9%
4599976 70.2.1.0 beta barrels › beta-clip › dUTPase-like › dUTPase-like 0.89 69.0 6.87e-01 86.0% 77.1%
3625168 70.2.1.1 beta barrels › beta-clip › dUTPase-like › dUTPase-like › dUTPase 0.89 66.0 7.24e-01 86.0% 90.4%
4014287 70.2.1.0 beta barrels › beta-clip › dUTPase-like › dUTPase-like 0.89 66.0 6.72e-01 86.0% 77.6%
4656379 70.2.1.1 beta barrels › beta-clip › dUTPase-like › dUTPase-like › dUTPase 0.89 66.0 6.69e-01 86.0% 77.0%
2709093 70.2.1.1 beta barrels › beta-clip › dUTPase-like › dUTPase-like › dUTPase 0.88 66.0 6.37e-01 86.0% 69.3%
4876557 70.2.1.1 beta barrels › beta-clip › dUTPase-like › dUTPase-like › dUTPase 0.88 68.0 6.73e-01 86.0% 76.4%
4162544 70.2.1.1 beta barrels › beta-clip › dUTPase-like › dUTPase-like › dUTPase 0.88 66.0 6.33e-01 86.0% 69.3%
4032891 70.2.1.1 beta barrels › beta-clip › dUTPase-like › dUTPase-like › dUTPase 0.87 73.0 6.55e-01 86.0% 80.6%
4995632 70.2.1.1 beta barrels › beta-clip › dUTPase-like › dUTPase-like › dUTPase 0.86 67.0 6.69e-01 86.0% 77.9%
224649 70.2.1.1 beta barrels › beta-clip › dUTPase-like › dUTPase-like › dUTPase 0.85 65.0 6.40e-01 86.0% 74.1%
4147159 70.2.1.1 beta barrels › beta-clip › dUTPase-like › dUTPase-like › dUTPase 0.85 67.0 7.03e-01 86.0% 88.8%
4664979 70.2.1.0 beta barrels › beta-clip › dUTPase-like › dUTPase-like 0.84 68.0 6.94e-01 86.0% 86.9%
4862744 70.2.1.1 beta barrels › beta-clip › dUTPase-like › dUTPase-like › dUTPase 0.84 66.0 6.77e-01 86.0% 84.1%
4130984 70.2.1.1 beta barrels › beta-clip › dUTPase-like › dUTPase-like › dUTPase 0.83 68.0 6.46e-01 86.0% 74.0%
2534305 70.2.1.1 beta barrels › beta-clip › dUTPase-like › dUTPase-like › dUTPase 0.83 67.0 6.50e-01 86.0% 76.4%
3590216 70.2.1.1 beta barrels › beta-clip › dUTPase-like › dUTPase-like › dUTPase 0.83 69.0 6.69e-01 86.0% 78.7%
4059745 70.2.1.1 beta barrels › beta-clip › dUTPase-like › dUTPase-like › dUTPase 0.81 68.0 6.86e-01 86.0% 90.4%
5049748 70.2.1.1 beta barrels › beta-clip › dUTPase-like › dUTPase-like › dUTPase 0.80 67.0 6.36e-01 86.0% 80.6%
1170967 70.2.1.1 beta barrels › beta-clip › dUTPase-like › dUTPase-like › dUTPase 0.77 63.0 6.15e-01 86.0% 77.9%
3761318 4.1.1.253 beta barrels › SH3 › SH3 › SH3 › DUF4537 0.71 24.0 3.38e-01 76.5% 61.4%
4940177 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 21.0 2.96e-01 76.5% 50.0%
None 0.70 58.0 5.06e-01 86.0% 69.9%
4048458 70.2.1.5 beta barrels › beta-clip › dUTPase-like › dUTPase-like › DCD 0.67 55.0 5.10e-01 86.0% 71.2%
4947773 70.2.1.5 beta barrels › beta-clip › dUTPase-like › dUTPase-like › DCD 0.65 53.0 4.95e-01 86.0% 82.4%
4032637 4.8.1.5 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR 0.65 21.0 3.31e-01 77.9% 70.9%
4958385 4.1.1.13 beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.64 20.0 3.50e-01 76.5% 90.0%
1487666 4.8.1.5 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR 0.64 21.0 3.27e-01 77.9% 70.9%
4942382 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 41.0 4.50e-01 89.7% 94.5%
5056415 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 36.0 4.15e-01 80.1% 92.6%
5060399 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 40.0 4.46e-01 89.7% 100.0%
4968483 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 40.0 4.38e-01 89.7% 98.1%
4993917 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 41.0 4.43e-01 89.7% 100.0%
3222091 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 34.0 3.79e-01 85.3% 86.0%
3709716 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 38.0 4.10e-01 86.0% 89.6%
5039862 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 37.0 4.19e-01 83.8% 100.0%
4605034 11.1.1.238 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › MG1 0.52 38.0 4.27e-01 81.6% 100.0%
5057948 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 39.0 4.25e-01 89.0% 97.3%
5068390 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 40.0 4.33e-01 89.7% 100.0%
5070279 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 38.0 4.22e-01 88.2% 100.0%
4968597 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 40.0 4.33e-01 88.2% 100.0%
5082837 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 39.0 3.35e-01 90.4% 46.8%
3618584 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 38.0 4.21e-01 89.0% 100.0%
3264087 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 37.0 3.99e-01 84.6% 90.9%
4059443 11.1.1.10 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PapD_N 0.51 43.0 4.27e-01 94.1% 87.9%
4865033 292.2.1.1 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box 0.51 25.0 2.62e-01 78.7% 47.6%
4932892 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 38.0 4.19e-01 86.8% 100.0%
5060759 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 37.0 4.09e-01 84.6% 100.0%
3996230 11.1.1.622 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_TMEM131L_3 0.50 36.0 4.06e-01 82.4% 100.0%
3265537 11.1.1.360 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › HYDIN_VesB_CFA65-like_Ig 0.50 38.0 4.09e-01 85.3% 95.7%