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ON146294.1__URG13026.1__B2_33__00033

Bact-Vir

ON146294.1__URG13026.1__B2_33__00033

Identity

Accession:
ON146294 ↗
Kingdom:
phage

Quality

61.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Stenotrophomonas_phage_B2

TaxID: 2936871

Cluster

View cluster (77 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 33-175_198-228
PDB
D2 medium residues 176-197_229-262
PDB
Domain cluster: representative
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4dqaA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.68 57.0 3.80e-01 91.1% 42.7%
8fefH01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.61 45.0 2.88e-01 80.4% 38.4%
4mdaA00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.57 45.0 3.25e-01 94.6% 71.5%
3tupA02 3.30.70.380 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain 0.54 45.0 3.85e-01 96.4% 95.8%
3ed4A02 3.30.1120.10 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.54 39.0 3.46e-01 78.6% 53.0%
1nrjA00 3.30.450.60 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.52 40.0 2.98e-01 83.9% 42.9%
4ybaA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.51 39.0 3.59e-01 85.7% 85.7%
1wchA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.50 43.0 2.72e-01 100.0% 68.2%
ECOD (24)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3336611 2004.1.1.26 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin 0.63 45.0 2.95e-01 76.8% 95.4%
4260621 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.61 43.0 2.69e-01 75.0% 81.5%
4319299 2004.1.1.5 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.60 45.0 2.98e-01 80.4% 44.6%
3674655 2003.1.9.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins 0.59 45.0 2.61e-01 85.7% 21.9%
3985309 2004.1.1.5 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.59 43.0 3.23e-01 80.4% 67.7%
3700776 292.2.1.0 ↗ a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.55 39.0 3.65e-01 75.0% 64.3%
5016503 77.1.1.0 ↗ beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein 0.55 47.0 3.80e-01 96.4% 50.9%
4289835 304.48.1.1 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 0.54 45.0 3.14e-01 100.0% 72.9%
1759643 4019.1.1.1 ↗ alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase 0.54 42.0 3.12e-01 85.7% 57.0%
4025108 3100.1.1.1 ↗ extended segments › Synaptobrevin › Synaptobrevin › Synaptobrevin › Synaptobrevin 0.54 39.0 2.87e-01 78.6% 34.0%
3265738 223.2.1.12 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › MAPKK1_Int 0.53 44.0 3.44e-01 92.9% 88.0%
5048642 223.2.1.5 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.53 39.0 3.04e-01 94.6% 35.5%
4979841 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.53 41.0 3.33e-01 94.6% 88.9%
3704272 2004.1.1.175 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ParA 0.52 41.0 2.61e-01 91.1% 74.0%
5050618 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.52 42.0 3.31e-01 96.4% 94.3%
3539573 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 38.0 2.63e-01 82.1% 23.8%
4969909 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 42.0 3.11e-01 91.1% 96.7%
5061945 245.1.1.0 ↗ a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 0.51 39.0 3.73e-01 83.9% 72.3%
4947038 327.7.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like 0.51 39.0 3.63e-01 83.9% 65.7%
4288346 3986.1.1.1 ↗ a+b two layers › GTP-binding protein lepA C-terminal domain-like › GTP-binding protein lepA C-terminal domain › GTP-binding protein lepA C-terminal domain › LepA_C 0.51 40.0 3.33e-01 98.2% 46.7%
3581766 222.1.1.0 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase 0.51 35.0 2.51e-01 73.2% 66.7%
4944816 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 34.0 2.65e-01 71.4% 53.8%
5051374 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 40.0 3.10e-01 94.6% 48.3%
3711598 327.11.2.3 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_6 0.50 44.0 3.42e-01 100.0% 76.9%