←Back to structures

ON146294.1__URG13028.1__B2_35__00035

Bact-Vir

ON146294.1__URG13028.1__B2_35__00035

Identity

Accession:
ON146294 ↗
Kingdom:
phage

Quality

77.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Stenotrophomonas_phage_B2

TaxID: 2936871

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-100
PDB
Domain cluster: rep: OR180307.1__WNT46115.1__X__00018__D16-112
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF22479.3 best Pam3_gp18 58.2 1.30e-15 95.0% 97.0%
CATH (39)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4exrA02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.71 33.0 3.82e-01 70.7% 60.6%
3d2lA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.67 38.0 4.76e-01 72.7% 90.5%
3mx7A00 2.40.128.180 Mainly Beta › Beta Barrel › Lipocalin › 0.66 53.0 5.51e-01 88.9% 92.2%
4ftxB01 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.66 41.0 3.77e-01 87.9% 48.4%
3bxoA02 2.20.130.10 Mainly Beta › Single Sheet › S-adenosyl-L-methionine-dependent methyltransferases › CAC2371-like domains 0.65 38.0 4.85e-01 74.7% 98.3%
5gv0A00 2.40.160.110 Mainly Beta › Beta Barrel › Porin › 0.65 52.0 4.45e-01 87.9% 91.4%
4exrA01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.64 34.0 3.70e-01 74.7% 60.5%
1y8cA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.62 34.0 4.27e-01 73.7% 90.0%
5fgoA00 3.10.450.700 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 36.0 4.36e-01 96.0% 95.2%
3k44B00 3.30.2450.30 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.59 45.0 3.99e-01 79.8% 98.6%
4n4bA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.59 49.0 3.46e-01 91.9% 90.9%
2eabB01 2.70.98.50 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › putative glycoside hydrolase family protein from bacillus halodurans 0.58 51.0 3.89e-01 100.0% 75.8%
3a57A00 2.60.270.30 Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › Vibrio parahaemolyticus thermostable direct hemolysin 0.58 50.0 4.41e-01 99.0% 94.2%
3holA03 2.40.128.240 Mainly Beta › Beta Barrel › Lipocalin › 0.58 42.0 4.43e-01 90.9% 86.5%
3cm1A00 2.30.31.20 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB 0.58 42.0 3.82e-01 76.8% 79.4%
3w9kA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.56 44.0 4.06e-01 86.9% 73.3%
7nn3B01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.56 43.0 3.04e-01 83.8% 64.9%
2nvnA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.56 39.0 3.66e-01 71.7% 100.0%
4wfvA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 45.0 4.00e-01 91.9% 66.0%
2kieA00 2.30.29.110 Mainly Beta › Roll › PH-domain like › 0.55 42.0 3.88e-01 79.8% 86.3%
2d4rA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.55 44.0 3.89e-01 86.9% 82.2%
1mdcA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 46.0 4.26e-01 93.9% 92.4%
3tfzB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 43.0 3.68e-01 86.9% 76.4%
3qc2B00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.53 44.0 3.01e-01 89.9% 30.0%
1pzdA01 2.60.40.1480 Mainly Beta › Sandwich › Immunoglobulin-like › Coatomer, gamma subunit, appendage domain 0.53 44.0 3.80e-01 89.9% 77.6%
4bboA00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.53 43.0 4.20e-01 89.9% 94.7%
3zxkA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 48.0 3.71e-01 100.0% 68.1%
2cm4A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 44.0 3.95e-01 96.0% 64.1%
5z5dA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 48.0 3.81e-01 100.0% 66.3%
3l4rA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 44.0 3.89e-01 93.9% 66.2%
4h5bA00 3.30.1460.70 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.52 43.0 3.79e-01 90.9% 83.6%
1vyfA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 44.0 4.05e-01 96.0% 74.1%
2it9A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.52 38.0 3.60e-01 76.8% 100.0%
1o8vA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 44.0 4.05e-01 96.0% 75.2%
1inyA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.52 45.0 3.06e-01 98.0% 50.0%
2e3nA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 39.0 3.02e-01 79.8% 68.0%
4azpA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 43.0 3.90e-01 93.9% 91.8%
6c1zA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.50 42.0 3.88e-01 96.0% 89.1%
3wmyA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.50 43.0 3.17e-01 100.0% 95.7%
ECOD (39)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3968112 881.1.1.0 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.73 43.0 3.64e-01 88.9% 37.7%
3812869 284.1.3.0 ↗ a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain 0.67 52.0 5.27e-01 82.8% 99.0%
3391728 3459.1.1.1 ↗ beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › FAIM1 0.66 51.0 5.52e-01 88.9% 96.4%
185415 3459.1.1.1 ↗ beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › FAIM1 0.66 53.0 5.51e-01 88.9% 92.2%
4957722 71.1.1.0 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.66 44.0 3.89e-01 85.9% 48.6%
3510850 3459.1.1.0 ↗ beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule 0.64 49.0 5.11e-01 86.9% 91.1%
4976250 3662.1.1.0 ↗ a+b two layers › Proteasome assembling chaperone 3 (PAC3)-related › Proteasome assembling chaperone 3 (PAC3)-related › Proteasome assembling chaperone 3 (PAC3)-related 0.59 43.0 4.11e-01 75.8% 97.4%
3816256 11.1.1.635 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_N_CWD1 0.59 41.0 3.69e-01 70.7% 90.4%
4464657 274.1.1.0 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.59 36.0 3.98e-01 81.8% 76.2%
3241305 295.1.1.3 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.59 44.0 3.95e-01 79.8% 100.0%
3264296 11.10.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like 0.59 52.0 4.62e-01 97.0% 82.9%
3340222 3131.1.1.3 ↗ a+b two layers › FYR domain › FYR domain › FYR domain › FYRC 0.57 46.0 4.31e-01 87.9% 94.4%
5025460 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.57 33.0 3.90e-01 70.7% 86.2%
3943894 77.1.1.7 ↗ beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › DUF1481 0.56 43.0 3.97e-01 79.8% 93.6%
4950432 210.1.1.5 ↗ a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › DUF2121 0.56 47.0 3.80e-01 90.9% 83.7%
3217795 11.10.1.6 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH 0.56 48.0 4.49e-01 96.0% 95.2%
3211509 11.10.1.6 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH 0.56 48.0 4.40e-01 96.0% 90.0%
3993370 5.1.3.25 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Mcl1_mid 0.55 49.0 3.54e-01 100.0% 45.2%
3213637 11.10.1.6 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH 0.55 48.0 4.42e-01 97.0% 91.5%
3312366 11.1.1.635 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_N_CWD1 0.55 41.0 3.63e-01 78.8% 88.3%
3234784 11.10.1.6 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH 0.55 47.0 4.23e-01 96.0% 89.3%
3795920 11.10.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like 0.55 47.0 4.74e-01 96.0% 94.0%
4195832 9.1.1.24 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin_7 0.54 46.0 4.27e-01 94.9% 93.8%
4008120 5.1.5.139 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DUF1481 0.53 43.0 4.03e-01 86.9% 93.3%
3737620 5.1.5.4 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DPPIV_N 0.53 45.0 2.93e-01 96.0% 41.6%
3441990 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.53 43.0 3.01e-01 91.9% 38.6%
4959571 2.4.1.0 ↗ beta barrels › OB-fold › MOP-like › MOP-like 0.52 44.0 3.24e-01 89.9% 98.0%
4954761 241.1.1.0 ↗ a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone 0.52 43.0 4.13e-01 92.9% 95.8%
3987711 5.1.2.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.51 43.0 3.07e-01 94.9% 94.5%
5045339 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.51 42.0 2.99e-01 91.9% 44.2%
3509569 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.51 38.0 3.73e-01 78.8% 100.0%
4954762 241.1.1.0 ↗ a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone 0.51 43.0 4.06e-01 94.9% 93.6%
3809302 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.51 37.0 3.95e-01 99.0% 89.4%
3224967 207.1.1.81 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.51 42.0 3.15e-01 90.9% 39.6%
3883246 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.51 44.0 3.75e-01 98.0% 68.2%
3763572 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.51 42.0 3.69e-01 93.9% 61.3%
4934762 330.6.1.1 ↗ a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.50 38.0 3.71e-01 82.8% 100.0%
5053021 4252.1.1.0 ↗ beta barrels › AttH-like › AttH-like › AttH-like 0.50 36.0 3.81e-01 85.9% 84.4%
5024203 330.10.1.0 ↗ a+b two layers › dsRBD-like › Heterocyclase TruD C-terminal domain › Heterocyclase TruD C-terminal domain 0.50 33.0 3.44e-01 100.0% 73.3%