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ON146294.1__URG13046.1__B2_53__00053
Bact-VirON146294.1__URG13046.1__B2_53__00053
Identity
- Accession:
- ON146294 ↗
- Kingdom:
- phage
Quality
80.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 186-240
Domain cluster:
rep: ON146294.1__URG13046.1__B2_53__00053__D120-170
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2cxhA01 | 3.40.50.10480 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Brix domain | 0.62 | 46.0 | 3.23e-01 | 80.0% | 47.1% |
| 3mhsA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.59 | 45.0 | 3.49e-01 | 85.5% | 66.1% |
| 4yliE00 | 3.10.100.10 | Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A | 0.58 | 42.0 | 3.14e-01 | 78.2% | 65.8% |
| 2oarB00 | 1.10.1200.120 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Large-conductance mechanosensitive channel, MscL; domain 1 | 0.58 | 34.0 | 2.67e-01 | 83.6% | 25.6% |
| 2p9mB00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.57 | 42.0 | 3.26e-01 | 80.0% | 51.2% |
| 4cooA03 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.57 | 42.0 | 3.21e-01 | 80.0% | 48.2% |
| 7xnzA02 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.57 | 41.0 | 3.16e-01 | 78.2% | 54.3% |
| 5aweA01 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.56 | 41.0 | 3.23e-01 | 80.0% | 57.9% |
| 1p5dX03 | 3.40.120.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 › Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 | 0.55 | 42.0 | 3.38e-01 | 85.5% | 68.1% |
| 2f7lA01 | 3.40.120.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 › Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 | 0.54 | 40.0 | 3.07e-01 | 85.5% | 56.7% |
| 5bmnA03 | 3.40.120.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 › Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 | 0.54 | 42.0 | 3.37e-01 | 89.1% | 58.0% |
| 3hf7A00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.54 | 38.0 | 3.01e-01 | 78.2% | 55.1% |
| 1wqaA03 | 3.40.120.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 › Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 | 0.54 | 36.0 | 3.11e-01 | 72.7% | 64.6% |
| 6abqB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 34.0 | 2.71e-01 | 87.3% | 34.0% |
| 1gefA00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.50 | 40.0 | 3.31e-01 | 98.2% | 95.8% |
| 3fv6A00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.50 | 37.0 | 2.86e-01 | 83.6% | 60.7% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3716212 | 376.1.1.5 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-UBP | 0.66 | 53.0 | 4.59e-01 | 89.1% | 64.7% |
| 4965835 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.58 | 42.0 | 3.12e-01 | 78.2% | 45.3% |
| 5061477 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.58 | 42.0 | 3.07e-01 | 78.2% | 37.4% |
| 4991987 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.58 | 46.0 | 3.24e-01 | 87.3% | 98.9% |
| 5032068 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.57 | 42.0 | 3.54e-01 | 78.2% | 76.8% |
| 3783360 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.57 | 41.0 | 2.97e-01 | 78.2% | 40.6% |
| 4287231 | 282.1.1.0 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain | 0.54 | 39.0 | 3.02e-01 | 80.0% | 47.9% |
| 4999043 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.51 | 37.0 | 2.93e-01 | 85.5% | 62.1% |
D2
medium
residues 1-60
Domain cluster:
rep: ON146294.1__URG13046.1__B2_53__00053__D120-170
D3
medium
residues 120-170
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3axbA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.60 | 43.0 | 2.68e-01 | 74.5% | 85.1% |
| 4nocD00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.58 | 45.0 | 3.33e-01 | 86.3% | 62.9% |
| 2cxhA01 | 3.40.50.10480 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Brix domain | 0.58 | 49.0 | 3.42e-01 | 94.1% | 56.3% |
| 3lv9A00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.57 | 44.0 | 3.34e-01 | 86.3% | 52.3% |
| 3i8nB00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.57 | 41.0 | 3.16e-01 | 80.4% | 35.7% |
| 4yliE00 | 3.10.100.10 | Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A | 0.57 | 43.0 | 3.21e-01 | 86.3% | 65.8% |
| 4dqwA02 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.55 | 41.0 | 3.25e-01 | 82.4% | 61.1% |
| 4cooA03 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.55 | 45.0 | 3.37e-01 | 94.1% | 64.2% |
| 2ouxA02 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.55 | 40.0 | 3.07e-01 | 80.4% | 49.6% |
| 1wqaA03 | 3.40.120.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 › Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 | 0.54 | 40.0 | 3.34e-01 | 82.4% | 65.6% |
| 1kfiA03 | 3.40.120.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 › Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 | 0.54 | 42.0 | 3.36e-01 | 96.1% | 56.3% |
| 7xnzA02 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.54 | 42.0 | 3.23e-01 | 90.2% | 62.8% |
| 2kv3A00 | 3.10.100.10 | Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A | 0.54 | 44.0 | 3.27e-01 | 92.2% | 75.6% |
| 5aweA01 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.53 | 41.0 | 3.24e-01 | 90.2% | 60.3% |
| 4esyA00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.53 | 40.0 | 2.96e-01 | 90.2% | 55.8% |
| 2yziB00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.52 | 40.0 | 3.09e-01 | 90.2% | 51.1% |
| 3ddjA02 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.51 | 43.0 | 3.25e-01 | 100.0% | 67.1% |
| 3pc3A03 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.51 | 42.0 | 3.19e-01 | 100.0% | 61.8% |
| 2p9mB00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.51 | 44.0 | 3.33e-01 | 100.0% | 68.2% |
| 2z3gB00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.51 | 41.0 | 3.26e-01 | 100.0% | 70.9% |
| 3kh5A02 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.50 | 37.0 | 2.84e-01 | 82.4% | 60.3% |
| 4zjpA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.50 | 35.0 | 2.64e-01 | 76.5% | 42.4% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3594243 | 376.1.1.5 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-UBP | 0.62 | 52.0 | 4.05e-01 | 100.0% | 41.6% |
| 4285702 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.60 | 47.0 | 3.78e-01 | 88.2% | 76.2% |
| 4999043 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.60 | 44.0 | 3.24e-01 | 80.4% | 51.4% |
| 4965835 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.59 | 44.0 | 3.24e-01 | 84.3% | 45.3% |
| 3961075 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.58 | 45.0 | 3.17e-01 | 86.3% | 42.4% |
| 4228426 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.58 | 45.0 | 3.76e-01 | 90.2% | 53.0% |
| 4018051 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.57 | 39.0 | 3.06e-01 | 78.4% | 66.4% |
| 5032068 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.57 | 44.0 | 3.73e-01 | 90.2% | 53.7% |
| 4145207 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.56 | 44.0 | 3.18e-01 | 90.2% | 55.0% |
| 4028672 | 7502.1.1.2 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Brix | 0.55 | 45.0 | 3.07e-01 | 100.0% | 85.3% |
| 3259347 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.55 | 40.0 | 2.98e-01 | 82.4% | 53.8% |
| 3409450 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.54 | 42.0 | 3.18e-01 | 90.2% | 49.0% |
| 3783360 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.54 | 41.0 | 2.98e-01 | 86.3% | 41.2% |
| 4287231 | 282.1.1.0 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain | 0.54 | 41.0 | 3.15e-01 | 90.2% | 47.9% |
| 3795130 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.53 | 45.0 | 3.16e-01 | 100.0% | 53.9% |
| 3960430 | 282.1.1.0 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain | 0.53 | 42.0 | 3.03e-01 | 94.1% | 52.4% |
| 3618572 | 282.1.1.0 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain | 0.53 | 45.0 | 3.29e-01 | 100.0% | 64.7% |
| 3597084 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.52 | 42.0 | 2.98e-01 | 94.1% | 41.1% |
| 3389293 | 209.1.1.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C | 0.52 | 40.0 | 2.98e-01 | 92.2% | 68.4% |