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ON169972.1__UPW35814.1__EM_012__00012
Bact-VirON169972.1__UPW35814.1__EM_012__00012
Identity
- Accession:
- ON169972 ↗
- Kingdom:
- phage
Quality
89.6
mean pLDDT
Taxonomy
TaxID: 2936914
Cluster
View cluster (10 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-54_112-134
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4r03A00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.66 | 40.0 | 3.56e-01 | 95.9% | 41.3% |
| 7kseA02 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.58 | 41.0 | 3.30e-01 | 73.0% | 93.2% |
| 6kxkB02 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.57 | 50.0 | 4.14e-01 | 100.0% | 81.5% |
| 1q48A00 | 3.90.1010.10 | Alpha Beta › Alpha-Beta Complex › Sufe protein. Chain: A › | 0.57 | 31.0 | 2.62e-01 | 86.5% | 27.6% |
| 2vtfA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 41.0 | 3.92e-01 | 86.5% | 64.8% |
| 5c71A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 44.0 | 4.10e-01 | 93.2% | 67.7% |
| 5jtwA03 | 2.60.40.1940 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 42.0 | 3.65e-01 | 87.8% | 78.0% |
| 7solA02 | 3.10.290.60 | Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › Ubiquitin-activating enzyme E1, UFD domain | 0.55 | 43.0 | 3.90e-01 | 86.5% | 63.1% |
| 2uvfA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 45.0 | 3.96e-01 | 93.2% | 72.4% |
| 6ryvA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 40.0 | 4.27e-01 | 86.5% | 90.8% |
| 3volA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.54 | 36.0 | 2.94e-01 | 98.6% | 37.0% |
| 3njaA02 | 2.10.70.100 | Mainly Beta › Ribbon › Complement Module; domain 1 › | 0.54 | 31.0 | 3.82e-01 | 85.1% | 93.5% |
| 5eiqA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 39.0 | 3.65e-01 | 86.5% | 63.7% |
| 3b33A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.52 | 36.0 | 3.18e-01 | 95.9% | 48.6% |
| 2h41A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 39.0 | 3.63e-01 | 91.9% | 64.2% |
| 2nq3A00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.52 | 44.0 | 3.72e-01 | 97.3% | 77.1% |
| 4c08A02 | 2.70.160.11 | Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 | 0.51 | 42.0 | 3.29e-01 | 97.3% | 97.3% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3694859 | 7579.1.1.34 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Tannase | 0.67 | 52.0 | 3.03e-01 | 81.1% | 14.6% |
| 4948486 | 1001.1.1.0 ↗ | a+b two layers › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 | 0.60 | 30.0 | 3.61e-01 | 82.4% | 72.0% |
| 5027787 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 40.0 | 3.82e-01 | 86.5% | 61.2% |
| 3940510 | 2484.5.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH | 0.58 | 36.0 | 3.53e-01 | 100.0% | 56.2% |
| 4991311 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 50.0 | 4.32e-01 | 100.0% | 75.8% |
| 3479537 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 41.0 | 3.80e-01 | 86.5% | 60.0% |
| 2718202 | 288.1.1.3 ↗ | a+b four layers › CNF1/YfiH-like putative cysteine hydrolases › CNF1/YfiH-like putative cysteine hydrolases › CNF1/YfiH-like putative cysteine hydrolases › CNF1 | 0.55 | 40.0 | 2.78e-01 | 79.7% | 49.1% |
| 3250619 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.55 | 34.0 | 3.05e-01 | 95.9% | 40.9% |
| 3522685 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 41.0 | 3.53e-01 | 93.2% | 50.0% |
| 3252932 | 221.7.1.2 ↗ | a+b two layers › beta-Grasp › E2-binding domain of E1 › E2-binding domain of E1 › E1_UFD | 0.55 | 43.0 | 4.06e-01 | 91.9% | 71.1% |
| 3978670 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.55 | 48.0 | 4.15e-01 | 100.0% | 80.0% |
| 4340836 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.54 | 32.0 | 3.28e-01 | 91.9% | 58.6% |
| 3462475 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.54 | 47.0 | 3.87e-01 | 100.0% | 77.9% |
| 3885397 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.54 | 42.0 | 3.53e-01 | 93.2% | 49.2% |
| 3796820 | 245.1.1.0 ↗ | a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 | 0.54 | 35.0 | 3.36e-01 | 83.8% | 57.6% |
| 3478069 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.53 | 37.0 | 3.44e-01 | 73.0% | 68.4% |
| 3476145 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 43.0 | 3.80e-01 | 93.2% | 67.5% |
| 3959925 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.53 | 37.0 | 3.40e-01 | 73.0% | 74.0% |
| 3393565 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.53 | 45.0 | 3.75e-01 | 97.3% | 68.9% |
| 3773140 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.52 | 45.0 | 3.51e-01 | 98.6% | 65.3% |
| 3252404 | 331.4.1.1 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › KA1 | 0.52 | 36.0 | 3.32e-01 | 71.6% | 69.5% |
| 5007391 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.52 | 44.0 | 3.05e-01 | 100.0% | 91.9% |
| 3275151 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.51 | 44.0 | 3.59e-01 | 98.6% | 75.9% |
| 4210059 | 2484.1.1.41 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › AnmK | 0.51 | 39.0 | 2.91e-01 | 86.5% | 57.2% |
| 5060979 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 43.0 | 3.17e-01 | 93.2% | 40.0% |
| 4116831 | 2484.1.1.41 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › AnmK | 0.51 | 39.0 | 2.58e-01 | 86.5% | 34.2% |
| 4626996 | 2484.1.1.41 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › AnmK | 0.50 | 38.0 | 2.95e-01 | 86.5% | 60.3% |
D2
high
residues 56-108
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2gv9A05 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.67 | 42.0 | 4.04e-01 | 94.3% | 55.9% |
| 6p3xB01 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.66 | 50.0 | 3.55e-01 | 90.6% | 26.0% |
| 2yqzA02 | 1.10.8.900 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.65 | 46.0 | 4.28e-01 | 100.0% | 58.8% |
| 4l9aA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.56 | 45.0 | 3.03e-01 | 100.0% | 91.9% |
| 3gn4A00 | 6.10.220.10 | Special › Helix non-globular › Helical scaffold and wing domains of SecA › | 0.55 | 49.0 | 3.68e-01 | 100.0% | 41.9% |
| 2d00A01 | 3.40.50.10580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ATPase, V1 complex, subunit F | 0.55 | 41.0 | 3.78e-01 | 86.8% | 62.7% |
| 1tkkA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.52 | 43.0 | 3.44e-01 | 96.2% | 63.5% |