Back to structures

ON184126.1__URX66170.1__PH4_000001__00001

Bact-Vir

ON184126.1__URX66170.1__PH4_000001__00001

Identity

Accession:
ON184126 ↗
Kingdom:
phage

Quality

74.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 81-178
PDB
D2 high residues 186-251
PDB
D3 high residues 264-332
PDB
D4 medium residues 345-496
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF18668.7 best Tail_spike_N 77.1 1.20e-21 44.1% 98.6%
D5 medium residues 509-535_739-905
PDB
D6 medium residues 536-674
PDB
CATH (40)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4bbwA02 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.91 88.0 6.20e-01 100.0% 41.2%
8gn6A01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.90 81.0 5.85e-01 100.0% 38.1%
1eurA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.87 83.0 5.92e-01 100.0% 38.8%
2w20B01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.87 84.0 5.80e-01 100.0% 39.1%
2xziA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.86 83.0 5.78e-01 100.0% 41.8%
7mhuA01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.85 79.0 5.58e-01 100.0% 36.3%
1sil000 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.85 81.0 5.69e-01 100.0% 42.0%
1w0pA02 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.84 79.0 5.56e-01 100.0% 36.3%
1so7A00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.78 71.0 5.03e-01 100.0% 36.0%
5hx0A00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.75 71.0 5.05e-01 100.0% 39.5%
3p2nB02 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.72 67.0 4.98e-01 100.0% 64.2%
3c7fA02 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.70 66.0 4.80e-01 99.3% 55.7%
3nqhA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.70 64.0 4.88e-01 100.0% 44.6%
1y7bA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.70 66.0 4.88e-01 100.0% 58.5%
8aa0E01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.70 60.0 4.61e-01 92.1% 54.6%
1gydB00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.70 65.0 4.90e-01 100.0% 46.3%
3qc2B00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.70 65.0 4.72e-01 100.0% 40.6%
3pijA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.69 65.0 4.66e-01 100.0% 71.7%
6eugA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.69 65.0 4.71e-01 100.0% 62.2%
4u6bA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.69 64.0 4.72e-01 100.0% 48.4%
1s1dA00 2.120.10.100 Mainly Beta › 6 Propeller › Neuraminidase › Apyrase 0.69 59.0 4.51e-01 99.3% 40.7%
6eufA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.69 63.0 4.76e-01 100.0% 44.2%
7bj4A01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.68 64.0 4.55e-01 100.0% 54.1%
2vsmA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.68 62.0 4.36e-01 100.0% 32.9%
3akhA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.67 62.0 4.70e-01 99.3% 61.0%
4qqsB00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.66 62.0 4.67e-01 100.0% 57.5%
5flwA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.66 62.0 4.70e-01 99.3% 54.0%
3wasA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.66 62.0 4.40e-01 100.0% 56.0%
2zwaA02 2.120.10.80 Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller 0.66 53.0 4.06e-01 100.0% 36.8%
1jmxB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.66 49.0 3.71e-01 99.3% 31.9%
2b5lB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.65 61.0 4.35e-01 100.0% 50.8%
6mlyB01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.65 59.0 4.68e-01 96.4% 50.8%
3sreA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.61 57.0 4.25e-01 100.0% 43.2%
4nzrM02 2.160.20.180 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.58 31.0 2.84e-01 95.0% 39.1%
4boeA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 33.0 3.26e-01 80.6% 53.2%
3zxkA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 46.0 3.96e-01 90.6% 64.8%
1ar0A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 36.0 3.84e-01 71.2% 90.4%
2i99A01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.52 35.0 3.40e-01 86.3% 62.0%
4r3aA02 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.51 37.0 3.76e-01 75.5% 97.9%
1lshA03 2.20.50.20 Mainly Beta › Single Sheet › Outer Surface Protein A; domain 2 › Lipovitellin. Chain A, domain 3 0.51 34.0 3.91e-01 92.1% 96.9%
ECOD (53)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
166755 5.1.3.143 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR, BNR_3 0.90 87.0 5.83e-01 100.0% 45.1%
4647210 5.1.3.28 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 0.90 87.0 5.76e-01 100.0% 43.7%
2832299 5.1.3.26 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_2 0.85 79.0 5.56e-01 100.0% 35.8%
4294271 5.1.3.143 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR, BNR_3 0.85 82.0 5.71e-01 100.0% 37.6%
3975228 5.1.3.28 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 0.85 81.0 5.70e-01 100.0% 42.1%
3573300 5.1.3.26 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_2 0.85 77.0 5.44e-01 100.0% 35.4%
4256420 5.1.3.134 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR, BNR_2 0.84 79.0 5.53e-01 100.0% 35.6%
3612632 5.1.3.28 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 0.81 77.0 5.01e-01 100.0% 41.3%
4021107 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.81 53.0 4.30e-01 98.6% 38.3%
3605180 5.1.3.28 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 0.80 75.0 5.54e-01 100.0% 58.2%
3612434 5.1.3.143 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR, BNR_3 0.79 75.0 5.06e-01 100.0% 37.8%
3645007 5.1.10.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed 0.78 47.0 5.96e-01 85.6% 100.0%
3067041 5.1.2.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_32N 0.74 66.0 4.87e-01 100.0% 39.3%
3692143 5.1.2.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_43 0.73 68.0 4.98e-01 100.0% 57.2%
4969245 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.73 63.0 6.10e-01 99.3% 81.9%
5039153 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.72 67.0 4.74e-01 100.0% 45.2%
5030040 5.1.2.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.72 68.0 5.31e-01 100.0% 60.4%
4927714 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.72 68.0 4.73e-01 100.0% 40.5%
5039580 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.71 66.0 4.76e-01 98.6% 43.8%
5041468 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.71 67.0 4.60e-01 99.3% 50.0%
3819893 5.1.4.288 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › APEH_N 0.70 66.0 4.51e-01 100.0% 42.5%
3934831 5.1.2.9 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Apyrase 0.70 61.0 4.60e-01 100.0% 39.9%
3473080 5.1.4.329 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF30693 0.69 64.0 4.38e-01 100.0% 31.1%
5058059 5.1.2.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.68 63.0 4.88e-01 99.3% 57.4%
5040579 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.67 63.0 4.30e-01 100.0% 41.6%
3802590 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.67 56.0 4.25e-01 100.0% 39.1%
1145825 5.1.2.7 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_130 0.66 62.0 4.40e-01 100.0% 56.0%
3717566 5.1.3.28 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 0.65 60.0 4.84e-01 100.0% 96.6%
3578584 5.1.8.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › putative conserved lipoprotein NT01CX_1156 0.65 49.0 5.45e-01 97.1% 100.0%
3646843 5.1.4.16 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A 0.65 60.0 4.45e-01 100.0% 48.2%
3518515 7579.1.1.0 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases 0.65 52.0 3.38e-01 100.0% 20.0%
3326445 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.64 61.0 4.33e-01 100.0% 42.4%
3714021 5.1.3.28 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 0.64 60.0 4.20e-01 100.0% 48.0%
3702545 5.1.3.28 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 0.63 59.0 4.08e-01 100.0% 43.3%
3461988 5.1.3.54 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF1668 0.63 53.0 3.90e-01 99.3% 35.7%
3832622 5.1.3.67 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.62 55.0 4.25e-01 100.0% 42.9%
3416181 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.62 58.0 4.13e-01 100.0% 41.6%
3810878 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.62 58.0 4.27e-01 100.0% 42.7%
5055697 5.1.4.668 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_CGLA 0.62 57.0 4.29e-01 100.0% 51.4%
3832022 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.61 56.0 4.23e-01 99.3% 55.0%
3441483 5.1.3.68 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF1618 0.61 56.0 4.12e-01 100.0% 43.2%
3417117 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.60 56.0 4.19e-01 100.0% 48.8%
3650282 243.5.1.8 a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region › DUF7074 0.60 37.0 4.45e-01 84.2% 94.4%
4560955 331.3.1.3 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START 0.60 37.0 3.15e-01 72.7% 37.8%
4333285 331.3.1.3 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START 0.59 38.0 3.12e-01 71.9% 36.3%
3481176 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 54.0 3.73e-01 100.0% 47.2%
3611830 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 54.0 3.69e-01 100.0% 39.4%
3814457 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.59 54.0 4.11e-01 100.0% 55.6%
3615148 5.1.3.135 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1, Kelch_KLHDC2_KLHL20_DRC7, Beta-prop_ATRN-LZTR1 0.58 53.0 3.95e-01 100.0% 39.7%
3831275 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.57 52.0 3.94e-01 100.0% 49.0%
3600658 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.56 51.0 3.82e-01 100.0% 42.0%
5083024 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.56 37.0 2.56e-01 90.6% 21.2%
3518469 216.1.1.0 a+b two layers › UBC-like › UBC-like › UBC-like 0.54 36.0 3.78e-01 87.8% 73.1%
D7 medium residues 675-738
PDB
Domain cluster: representative
CATH (59)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2w20B01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.76 67.0 4.12e-01 100.0% 33.4%
6nu7A01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.67 57.0 3.66e-01 98.4% 33.6%
3buuB00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.66 57.0 3.97e-01 98.4% 82.7%
4exrA02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 48.0 4.71e-01 90.6% 73.2%
7bwcA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.65 56.0 3.58e-01 100.0% 34.1%
8aa0E01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.65 55.0 3.60e-01 100.0% 36.6%
3w15A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.62 52.0 3.37e-01 100.0% 28.7%
2k54A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 50.0 4.14e-01 93.8% 87.0%
3f40A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 50.0 4.29e-01 95.3% 86.5%
3jv1A00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.61 54.0 3.89e-01 98.4% 54.4%
3fkaB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 49.0 4.11e-01 93.8% 89.2%
3fljA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 50.0 3.98e-01 95.3% 70.2%
1tp6A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 48.0 4.02e-01 93.8% 95.2%
3en8A01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 49.0 4.11e-01 90.6% 87.5%
3ff2A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 46.0 3.90e-01 89.1% 91.5%
4r80A00 3.10.450.630 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 47.0 4.57e-01 93.8% 78.9%
3f8xB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 49.0 3.97e-01 95.3% 75.0%
4exrA01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 45.0 4.24e-01 95.3% 67.9%
1ntyA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 52.0 4.18e-01 100.0% 72.6%
1a2vA03 2.70.98.20 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain 0.58 48.0 3.00e-01 98.4% 77.0%
3blzA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 47.0 3.92e-01 93.8% 87.9%
3ke7B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 47.0 3.92e-01 98.4% 82.0%
3pgbA01 2.70.98.20 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain 0.58 45.0 2.71e-01 87.5% 79.4%
2r4iA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 46.0 3.88e-01 96.9% 88.6%
4orlA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 45.0 3.92e-01 93.8% 80.9%
3ci0K01 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.56 46.0 3.98e-01 92.2% 84.6%
4bg7A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.56 46.0 4.16e-01 98.4% 65.3%
1pu4A03 2.70.98.20 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain 0.56 46.0 2.91e-01 100.0% 81.1%
2lyxA00 3.10.450.390 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Protein of unknown function DUF3889 0.56 44.0 4.13e-01 93.8% 75.9%
3k7cA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 42.0 3.63e-01 84.4% 91.7%
4o4oA00 2.40.128.590 Mainly Beta › Beta Barrel › Lipocalin › CpcT/CpeT domain 0.56 45.0 3.32e-01 95.3% 41.6%
2giaA00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.56 45.0 3.50e-01 93.8% 51.9%
3holA03 2.40.128.240 Mainly Beta › Beta Barrel › Lipocalin › 0.55 41.0 3.78e-01 98.4% 60.7%
1uhzA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.55 46.0 4.18e-01 95.3% 82.0%
4xmeA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 45.0 3.37e-01 96.9% 47.3%
2xklA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 39.0 3.14e-01 79.7% 49.7%
3hpcX00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.54 40.0 3.06e-01 79.7% 91.0%
6obtA00 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.54 41.0 2.89e-01 90.6% 40.7%
1tg0A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 37.0 3.71e-01 73.4% 86.4%
3thxA02 3.30.420.110 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › MutS, connector domain 0.53 41.0 3.17e-01 87.5% 90.3%
1h91A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 39.0 3.02e-01 84.4% 31.7%
4oocA00 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.53 41.0 2.83e-01 90.6% 77.2%
1di2A00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.53 43.0 4.29e-01 92.2% 94.2%
2nugB02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.53 43.0 4.25e-01 92.2% 91.5%
2ex2A01 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.53 42.0 3.02e-01 98.4% 85.3%
2rkcA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.52 43.0 2.75e-01 100.0% 33.8%
3wjcA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 44.0 3.40e-01 96.9% 49.0%
2hx0A01 3.30.1330.80 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 0.52 37.0 3.01e-01 76.6% 70.5%
5w8mA00 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.52 40.0 3.03e-01 92.2% 99.0%
3bm4A00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.52 37.0 2.78e-01 79.7% 63.5%
1omoA01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.52 41.0 3.31e-01 95.3% 57.0%
3lygA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 41.0 3.50e-01 95.3% 86.7%
5kbzB00 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.51 44.0 2.84e-01 96.9% 40.0%
3qf7A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 36.0 2.41e-01 82.8% 16.7%
3eliA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.50 42.0 3.33e-01 96.9% 50.7%
1ln1A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.50 39.0 2.89e-01 92.2% 48.8%
4hgzA02 2.20.25.570 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.50 36.0 3.68e-01 87.5% 85.0%
4k15A00 2.60.40.3860 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 36.0 2.97e-01 81.2% 39.1%
2dmyA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.50 41.0 3.68e-01 96.9% 81.4%
ECOD (58)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3924310 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.66 54.0 3.39e-01 93.8% 16.5%
3744143 220.1.1.32 beta barrels › PH domain-like › PH domain-like › PH domain-like › Sec3-PIP2_bind 0.65 55.0 4.27e-01 98.4% 51.3%
3214215 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.65 54.0 4.52e-01 93.8% 81.6%
3183932 5.1.2.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_32N 0.65 55.0 3.55e-01 98.4% 37.5%
3926803 5.1.4.15 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RPE65 0.65 55.0 3.25e-01 98.4% 27.7%
4929762 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.64 50.0 4.51e-01 93.8% 60.0%
3663999 5.1.2.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.63 54.0 3.45e-01 100.0% 36.2%
5034706 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.63 50.0 4.75e-01 89.1% 74.7%
3928508 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.62 52.0 3.36e-01 100.0% 47.6%
5022885 5.1.4.43 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP_3 0.62 53.0 3.23e-01 100.0% 25.1%
3691934 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.61 51.0 3.10e-01 98.4% 24.5%
3269464 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.61 51.0 4.41e-01 100.0% 66.4%
5052916 243.1.1.22 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Lumazine_bd_2 0.61 49.0 4.02e-01 93.8% 83.8%
3821398 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.61 48.0 3.17e-01 98.4% 19.0%
3429751 708.1.1.2 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › WRKY 0.61 46.0 4.78e-01 93.8% 91.7%
169965 243.1.1.18 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.61 50.0 4.04e-01 95.3% 72.8%
3723840 5.1.3.40 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Arylsulfotran_2 0.60 51.0 3.25e-01 100.0% 37.3%
3505182 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 42.0 3.94e-01 75.0% 58.7%
3852953 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.60 51.0 3.52e-01 100.0% 96.7%
4977517 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.60 48.0 4.66e-01 100.0% 82.7%
3168944 5.1.4.97 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Rrn6_beta-prop 0.59 52.0 3.18e-01 100.0% 29.0%
3781730 5.1.11.3 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › Utp8_b_propeller 0.59 50.0 3.19e-01 100.0% 24.6%
3933016 5.1.2.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.59 49.0 3.30e-01 100.0% 32.5%
3423430 2002.1.1.219 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Raffinose_syn 0.59 41.0 2.47e-01 73.4% 55.2%
4024970 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.59 49.0 3.07e-01 100.0% 31.6%
3803981 243.1.1.25 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_3 0.58 49.0 3.92e-01 100.0% 78.6%
3989344 243.1.1.18 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.58 46.0 3.88e-01 93.8% 83.2%
376518 243.1.1.25 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_3 0.58 47.0 3.92e-01 98.4% 82.0%
3712361 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.58 46.0 3.75e-01 93.8% 82.9%
3820010 881.1.1.1 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP 0.58 47.0 3.72e-01 100.0% 43.8%
3740914 5.1.4.80 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Utp8_b_propeller 0.57 48.0 3.10e-01 100.0% 26.4%
5071336 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.57 48.0 3.96e-01 100.0% 80.5%
3198474 11.10.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like 0.57 45.0 3.64e-01 87.5% 66.2%
3438237 12.3.1.2 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Cu_amine_oxid 0.57 44.0 3.02e-01 85.9% 71.0%
5036897 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.57 46.0 3.75e-01 98.4% 46.2%
3453561 10.1.1.2 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Lectin_legB 0.57 42.0 2.93e-01 82.8% 59.6%
3721408 5.1.3.40 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Arylsulfotran_2 0.56 47.0 2.96e-01 100.0% 27.0%
4783165 5.1.3.36 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › CyRPA 0.56 46.0 3.59e-01 100.0% 50.6%
3468063 5.1.3.65 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF295 0.56 47.0 3.07e-01 100.0% 40.2%
4666231 9.1.1.14 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › CpeS 0.56 46.0 3.46e-01 95.3% 57.7%
1098206 295.1.1.1 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PC4 0.56 46.0 4.16e-01 98.4% 65.3%
4321969 222.1.1.0 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase 0.55 43.0 3.31e-01 90.6% 72.7%
3276970 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 38.0 3.26e-01 73.4% 66.4%
3241305 295.1.1.3 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.55 41.0 3.37e-01 90.6% 40.0%
3906768 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.54 46.0 3.80e-01 98.4% 52.0%
3966051 274.1.1.0 a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.54 42.0 3.40e-01 87.5% 72.6%
3169357 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.54 44.0 3.83e-01 96.9% 55.5%
4662134 274.1.1.0 a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.54 40.0 3.39e-01 82.8% 45.2%
4782007 5.1.11.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › eIF2A 0.54 44.0 3.04e-01 100.0% 29.5%
4464658 274.1.1.59 a+b two layers › Pili subunits › Pili subunits › Pili subunits › ComGG 0.53 40.0 3.41e-01 84.4% 69.3%
3496817 3369.1.1.1 beta meanders › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › Lamp2-like_luminal 0.52 42.0 3.35e-01 98.4% 53.1%
3263516 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 37.0 3.20e-01 78.1% 76.2%
3480143 241.15.1.0 a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain 0.51 43.0 3.33e-01 96.9% 52.0%
3721701 222.1.1.0 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase 0.51 42.0 3.32e-01 96.9% 82.7%
3749345 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.51 39.0 3.71e-01 85.9% 72.5%
3923143 633.23.1.17 alpha bundles › Bromodomain-like › Claudin › Claudin › DuoxA 0.51 40.0 2.89e-01 96.9% 49.2%
5054861 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.50 36.0 2.25e-01 85.9% 11.0%
1290125 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.50 35.0 2.66e-01 79.7% 25.8%
D8 medium residues 908-1049
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6o38A04 2.60.120.1230 Mainly Beta › Sandwich › Jelly Rolls › 0.73 45.0 5.61e-01 71.8% 100.0%
4dnyA00 2.60.120.1230 Mainly Beta › Sandwich › Jelly Rolls › 0.64 45.0 5.12e-01 88.0% 95.4%
1uoyA01 2.30.130.50 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › 0.60 24.0 3.66e-01 90.8% 91.2%
4v02C00 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.58 36.0 3.82e-01 71.1% 70.5%
3vpbE00 2.20.28.160 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › 0.55 22.0 3.51e-01 90.1% 94.6%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4131560 207.5.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Cell-division inhibitor MinC-C › Cell-division inhibitor MinC-C › MinC_C 0.54 36.0 3.85e-01 71.1% 79.2%