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ON191531.1__URG17379.1__Mbo2_009__00009

Bact-Vir

ON191531.1__URG17379.1__Mbo2_009__00009

Identity

Accession:
ON191531 ↗
Kingdom:
phage

Quality

75.1 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-76
PDB
Domain cluster: representative
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3mqgA02 2.20.70.110 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.79 41.0 5.34e-01 95.8% 94.9%
3jtzA00 3.30.160.390 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Integrase, DNA-binding domain 0.63 46.0 4.51e-01 79.2% 72.7%
3dtdD00 2.60.40.1880 Mainly Beta › Sandwich › Immunoglobulin-like › Invasion associated locus B (IalB) protein 0.62 54.0 4.26e-01 95.8% 98.6%
1tj6A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 50.0 4.34e-01 93.1% 97.4%
2kr0A01 2.30.29.70 Mainly Beta › Roll › PH-domain like › Proteasomal ubiquitin receptor Rpn13/ADRM1 0.59 48.0 4.27e-01 94.4% 99.1%
3rioA01 2.30.24.10 Mainly Beta › Roll › Transcription Regulation, Sacy; Chain A › CAT RNA-binding domain 0.57 43.0 4.49e-01 81.9% 95.6%
3n8bA00 3.10.450.700 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 44.0 4.36e-01 100.0% 80.0%
4jpdA00 3.30.920.10 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY 0.56 39.0 3.43e-01 72.2% 54.1%
3i8tA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 44.0 3.55e-01 88.9% 55.7%
3ei3A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 46.0 2.98e-01 94.4% 25.6%
1vhzA01 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.54 40.0 3.08e-01 81.9% 77.5%
2uvaG07 3.30.1120.100 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.53 41.0 3.39e-01 95.8% 44.9%
6vilA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.52 38.0 3.16e-01 80.6% 78.6%
5jozB02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 45.0 3.33e-01 100.0% 61.3%
3a1jB00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.51 43.0 2.95e-01 94.4% 49.8%
ECOD (30)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3310464 375.1.1.69 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zinc_ribbon_12 0.69 45.0 5.19e-01 95.8% 98.0%
3766391 77.1.1.2 beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › FAM194 0.66 50.0 3.93e-01 83.3% 91.3%
4942828 298.1.1.24 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 0.66 38.0 2.96e-01 91.7% 25.0%
3343550 243.1.1.53 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › WI12 0.65 56.0 4.44e-01 94.4% 49.7%
3592050 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 49.0 4.06e-01 90.3% 100.0%
3743230 5.1.4.36 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N 0.60 52.0 3.21e-01 98.6% 30.4%
3863197 77.1.1.2 beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › FAM194 0.59 47.0 3.70e-01 88.9% 80.6%
5022396 3459.1.1.0 beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule 0.59 48.0 4.71e-01 94.4% 95.0%
5019856 252.2.1.0 a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.57 45.0 4.31e-01 100.0% 74.1%
3505384 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.57 50.0 3.30e-01 100.0% 24.7%
4011804 5.1.4.36 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N 0.57 51.0 3.14e-01 100.0% 19.0%
3231054 10.1.1.4 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin 0.56 45.0 3.68e-01 88.9% 51.4%
3167001 5.1.4.36 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N 0.56 47.0 2.95e-01 94.4% 30.7%
3289877 394.1.1.1 few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 0.56 35.0 3.95e-01 95.8% 90.0%
3478983 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 46.0 4.10e-01 93.1% 98.1%
5010861 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 48.0 3.06e-01 98.6% 31.7%
3933227 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 47.0 4.10e-01 97.2% 88.7%
3749496 5.1.3.99 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FG-GAP_3 0.54 47.0 2.94e-01 100.0% 30.5%
3348604 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.54 46.0 3.67e-01 100.0% 83.7%
4203120 5.1.4.36 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N 0.54 47.0 2.92e-01 100.0% 18.9%
5039819 220.5.1.1 beta barrels › PH domain-like › NucS N-terminal domain › NucS N-terminal domain › NucS_N 0.53 39.0 3.27e-01 77.8% 83.8%
3412797 394.1.1.1 few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 0.53 37.0 3.97e-01 81.9% 84.1%
3302391 4.1.1.140 beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.53 36.0 2.96e-01 72.2% 62.9%
3365640 5.1.4.36 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N 0.52 47.0 2.88e-01 98.6% 18.3%
3494765 214.1.1.0 a+b two layers › SH2 › SH2 › SH2 0.52 37.0 2.67e-01 76.4% 44.5%
4057793 71.1.1.3 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB 0.52 43.0 3.44e-01 100.0% 83.0%
4939883 244.3.1.1 a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › NifU_N 0.51 39.0 3.25e-01 100.0% 44.3%
5055513 220.5.1.1 beta barrels › PH domain-like › NucS N-terminal domain › NucS N-terminal domain › NucS_N 0.51 37.0 3.20e-01 79.2% 70.8%
4208333 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 44.0 3.76e-01 100.0% 82.5%
3579711 63.1.1.3 beta barrels › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › PRKCSH 0.50 45.0 3.11e-01 100.0% 44.1%