←Back to structures

ON210835.1__URO01802.1__268TH002_7__00007

Bact-Vir

ON210835.1__URO01802.1__268TH002_7__00007

Identity

Accession:
ON210835 ↗
Kingdom:
phage

Quality

83.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Bacillus_phage_268TH002

TaxID: 2950151

Cluster

View cluster (7 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 55-128
PDB
Domain cluster: rep: IMGVR_UViG_3300017642_000002-3300017642-Ga0183098_1071013__D184-256
CATH (58)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6oqrA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.79 64.0 5.99e-01 100.0% 72.2%
3gqbA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.77 63.0 6.43e-01 100.0% 93.0%
2wssA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.76 63.0 5.84e-01 100.0% 72.0%
3qtgA02 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.75 67.0 6.22e-01 100.0% 92.6%
1vw3C01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.70 63.0 5.21e-01 100.0% 70.2%
2f9hA00 2.40.33.40 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › Phosphotransferase system, glucitol/sorbitol-specific IIA component 0.70 60.0 5.21e-01 100.0% 97.5%
3t05A02 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.70 63.0 5.72e-01 100.0% 94.8%
1o67C00 2.40.33.20 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.70 62.0 4.50e-01 100.0% 68.6%
2dpyA00 3.40.50.12240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.70 60.0 3.73e-01 100.0% 16.8%
7oo1A01 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.69 56.0 5.55e-01 87.8% 100.0%
3gg8C03 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.69 62.0 5.67e-01 100.0% 94.8%
4rt0A00 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.69 54.0 4.72e-01 83.8% 73.4%
3dclA02 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.69 62.0 5.78e-01 100.0% 92.3%
8eq1A01 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.69 59.0 5.58e-01 94.6% 100.0%
7r6yA01 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.68 58.0 5.41e-01 94.6% 100.0%
3w1eA03 2.40.10.410 Mainly Beta › Beta Barrel › Thrombin, subunit H › FlgT, C-terminal domain 0.68 60.0 5.68e-01 100.0% 97.8%
4g6iC02 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.68 60.0 5.55e-01 100.0% 87.2%
3kw2A01 2.40.240.20 Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 0.68 53.0 5.48e-01 83.8% 95.6%
4zgnB00 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.67 56.0 4.96e-01 89.2% 78.6%
1kzlA02 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.67 60.0 5.40e-01 100.0% 84.2%
3a35A01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.67 59.0 5.54e-01 100.0% 88.0%
2qf4A01 2.40.10.340 Mainly Beta › Beta Barrel › Thrombin, subunit H › Rod shape-determining protein MreC, domain 1 0.66 53.0 5.21e-01 100.0% 82.3%
4g6iB01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.66 58.0 5.51e-01 100.0% 92.1%
1i8dA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.66 58.0 5.48e-01 100.0% 92.1%
5gxuB01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.66 57.0 4.91e-01 100.0% 91.8%
3kw3B01 2.40.37.10 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.65 57.0 4.64e-01 100.0% 66.0%
5yycA01 2.40.37.10 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.65 57.0 4.73e-01 100.0% 67.4%
4beuA01 2.40.37.10 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.65 57.0 4.37e-01 100.0% 57.7%
4dqlB01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.65 56.0 5.02e-01 100.0% 94.5%
3co8A01 2.40.37.10 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.64 57.0 4.56e-01 100.0% 65.5%
2fvgA02 2.40.30.40 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 0.64 57.0 5.70e-01 98.6% 98.7%
4eclA01 2.40.37.10 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.64 56.0 4.49e-01 100.0% 68.2%
3k6yA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.64 46.0 4.36e-01 85.1% 63.0%
4ac9C04 2.40.10.190 Mainly Beta › Beta Barrel › Thrombin, subunit H › translation elongation factor selb, chain A, domain 4 0.64 54.0 5.31e-01 100.0% 88.7%
2dyiA01 2.40.30.60 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › RimM 0.63 57.0 5.46e-01 100.0% 89.3%
2j5uA02 2.40.10.340 Mainly Beta › Beta Barrel › Thrombin, subunit H › Rod shape-determining protein MreC, domain 1 0.63 54.0 5.28e-01 100.0% 90.5%
3hurA01 2.40.37.10 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.61 53.0 4.21e-01 100.0% 53.4%
2p13A00 3.30.465.10 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › 0.60 43.0 4.17e-01 75.7% 78.8%
3oyyA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.60 47.0 5.00e-01 98.6% 93.9%
1l1jA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.60 46.0 4.06e-01 87.8% 54.2%
3nziA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.59 45.0 4.10e-01 87.8% 59.4%
4g9mB00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.59 40.0 3.24e-01 70.3% 98.6%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.58 46.0 4.97e-01 98.6% 100.0%
2z9iC01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.58 45.0 4.24e-01 86.5% 76.1%
5b6iA02 2.40.30.90 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacterial fluorinating enzyme like 0.58 50.0 4.50e-01 100.0% 89.7%
3laeA00 3.30.465.10 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › 0.57 43.0 4.17e-01 78.4% 82.7%
6s8zA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.57 44.0 4.76e-01 98.6% 100.0%
2oaiA00 3.30.465.10 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › 0.57 41.0 4.05e-01 77.0% 78.8%
2pliA00 3.30.465.10 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › 0.57 41.0 3.98e-01 77.0% 78.6%
5hmaA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.57 44.0 4.27e-01 89.2% 75.9%
2wylC00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.56 40.0 2.68e-01 74.3% 45.3%
2p4pA00 3.30.465.10 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › 0.56 41.0 3.94e-01 77.0% 81.0%
3g1pA00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.56 40.0 2.81e-01 75.7% 47.4%
2o3gA00 3.30.465.10 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › 0.55 40.0 4.03e-01 77.0% 89.5%
4e9jA02 3.30.1370.120 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.55 41.0 4.23e-01 81.1% 94.2%
2nqwA00 3.30.465.10 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › 0.54 40.0 3.81e-01 78.4% 82.8%
1yueA02 2.10.10.40 Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › 0.53 38.0 4.21e-01 78.4% 91.8%
1q8mA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 40.0 3.48e-01 86.5% 85.1%
ECOD (88)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5056460 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.84 73.0 7.29e-01 100.0% 90.7%
5078307 11.21.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein 0.83 78.0 7.79e-01 100.0% 100.0%
4526316 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.77 63.0 5.84e-01 100.0% 69.5%
1685099 1.1.7.51 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › NeqB_N 0.77 56.0 6.15e-01 93.2% 96.6%
4163711 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.77 62.0 5.96e-01 98.6% 76.5%
4994399 1.1.15.1 ↗ beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.77 70.0 6.40e-01 100.0% 94.7%
5078309 11.21.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein 0.76 70.0 6.80e-01 100.0% 97.5%
4311355 1.1.15.1 ↗ beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.73 65.0 5.90e-01 98.6% 96.0%
4016867 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.73 67.0 5.73e-01 100.0% 86.1%
3549475 4.1.1.302 ↗ beta barrels › SH3 › SH3 › SH3 › tSH3-B_UBE2O 0.73 50.0 4.54e-01 70.3% 94.7%
4402716 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.72 63.0 6.01e-01 100.0% 83.5%
5064404 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.72 53.0 5.82e-01 86.5% 95.0%
3322961 1.1.15.1 ↗ beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.71 62.0 5.80e-01 94.6% 100.0%
4014420 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.71 63.0 5.83e-01 100.0% 93.7%
3590326 1.1.15.1 ↗ beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.71 64.0 5.67e-01 100.0% 96.2%
3787268 1.1.7.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Lum_binding 0.71 63.0 5.32e-01 100.0% 69.6%
4954732 1.1.15.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like 0.71 64.0 5.97e-01 100.0% 95.6%
4945103 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.70 63.0 5.58e-01 100.0% 81.9%
3205875 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.70 63.0 5.17e-01 100.0% 85.2%
3442841 1.1.7.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Lum_binding 0.70 62.0 5.55e-01 100.0% 88.6%
4956344 3613.1.1.0 ↗ beta barrels › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain 0.70 56.0 5.67e-01 86.5% 94.7%
3830342 1.1.7.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Lum_binding 0.70 62.0 5.44e-01 100.0% 78.2%
4949095 2004.1.1.10 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATP-synt_ab 0.69 54.0 3.46e-01 98.6% 16.7%
5072694 1.1.15.1 ↗ beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.69 61.0 5.90e-01 100.0% 96.5%
3481480 1.1.15.1 ↗ beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.69 61.0 5.48e-01 97.3% 98.0%
4966534 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 45.0 5.32e-01 70.3% 100.0%
4959198 3613.1.1.0 ↗ beta barrels › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain 0.68 56.0 4.49e-01 87.8% 84.8%
5002449 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 46.0 5.28e-01 74.3% 94.5%
5046975 1.1.7.21 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RIBIOP_C 0.68 58.0 5.71e-01 100.0% 88.7%
5024154 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.68 59.0 5.71e-01 100.0% 85.9%
3404531 1.1.15.1 ↗ beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.68 60.0 5.34e-01 98.6% 95.2%
4999166 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.68 58.0 5.79e-01 98.6% 93.3%
4245780 3613.1.1.1 ↗ beta barrels › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain › Clp1 0.68 54.0 4.36e-01 87.8% 79.3%
5073223 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.67 59.0 5.64e-01 100.0% 84.7%
4625449 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.67 60.0 5.62e-01 100.0% 94.4%
4602848 1.1.7.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Lum_binding 0.67 59.0 5.58e-01 100.0% 86.7%
3163913 1.1.5.16 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › MreC 0.67 59.0 4.14e-01 100.0% 62.9%
3590667 1.1.5.16 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › MreC 0.66 58.0 4.18e-01 100.0% 70.1%
5015718 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.66 57.0 5.49e-01 100.0% 85.5%
4989083 284.4.1.0 ↗ a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain 0.66 44.0 4.94e-01 70.3% 92.7%
4032514 1.1.5.16 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › MreC 0.66 57.0 4.22e-01 100.0% 76.1%
4301386 1.1.5.16 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › MreC 0.66 57.0 4.16e-01 100.0% 67.9%
4946165 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 46.0 5.33e-01 74.3% 98.2%
4596341 1.1.7.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.66 59.0 5.46e-01 100.0% 82.1%
5050922 1.1.5.16 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › MreC 0.65 57.0 4.21e-01 100.0% 76.0%
3180421 239.1.1.0 ↗ beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like 0.64 51.0 5.23e-01 97.3% 90.0%
3267060 11.1.1.820 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Beta-sand_ComC_2nd 0.63 53.0 5.21e-01 100.0% 87.5%
4209875 1.1.7.6 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ala_racemase_C 0.63 55.0 4.55e-01 100.0% 73.3%
1862382 11.1.1.29 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG 0.62 55.0 4.68e-01 100.0% 64.5%
4310178 1.1.7.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.62 55.0 5.22e-01 100.0% 84.4%
3175516 239.1.1.0 ↗ beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like 0.62 49.0 4.46e-01 95.9% 63.0%
5015084 239.1.1.7 ↗ beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Lhr_WH 0.62 46.0 5.05e-01 78.4% 96.7%
5014673 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.62 42.0 4.15e-01 71.6% 98.8%
3275452 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 51.0 4.56e-01 100.0% 63.6%
3251646 11.1.1.29 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG 0.62 48.0 4.78e-01 100.0% 82.5%
3922010 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 53.0 4.86e-01 98.6% 85.0%
3257691 11.1.1.29 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG 0.61 51.0 4.83e-01 100.0% 77.8%
3263990 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 49.0 4.85e-01 100.0% 85.0%
3262181 11.1.1.29 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG 0.61 49.0 4.87e-01 100.0% 85.0%
5063537 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.61 44.0 4.79e-01 94.6% 96.7%
3250137 11.1.1.820 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Beta-sand_ComC_2nd 0.60 50.0 4.87e-01 98.6% 82.4%
3765958 189.1.1.0 ↗ alpha bundles › GTPase activation domain, GAP › GTPase activation domain, GAP › GTPase activation domain, GAP 0.60 52.0 3.14e-01 98.6% 15.9%
2663252 1.1.4.1 ↗ beta barrels › cradle loop barrel › RIFT-related › Bacterial fluorinating enzyme-C › SAM_HAT_C 0.60 53.0 4.79e-01 100.0% 87.1%
3254065 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 50.0 4.58e-01 100.0% 69.5%
3275793 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 50.0 4.82e-01 100.0% 84.7%
3573381 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 51.0 4.61e-01 98.6% 85.7%
5060760 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.59 48.0 5.04e-01 94.6% 100.0%
4028885 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.58 47.0 5.03e-01 100.0% 98.5%
3273437 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 50.0 4.62e-01 100.0% 76.0%
3940419 11.1.1.29 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG 0.58 50.0 4.26e-01 98.6% 64.0%
3256018 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 49.0 4.69e-01 100.0% 81.1%
3961546 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.57 46.0 4.83e-01 94.6% 98.5%
4126578 4.1.1.245 ↗ beta barrels › SH3 › SH3 › SH3 › SspH 0.57 43.0 4.71e-01 98.6% 100.0%
4043323 4.1.1.245 ↗ beta barrels › SH3 › SH3 › SH3 › SspH 0.57 43.0 4.74e-01 98.6% 100.0%
7164 217.2.1.1 ↗ a+b complex topology › FAD-binding domain-like › CorC/HlyC domain-like › CorC/HlyC domain-like › CorC_HlyC 0.57 41.0 4.05e-01 77.0% 78.8%
5036647 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.56 46.0 4.78e-01 94.6% 97.1%
3965482 217.2.1.1 ↗ a+b complex topology › FAD-binding domain-like › CorC/HlyC domain-like › CorC/HlyC domain-like › CorC_HlyC 0.56 41.0 4.02e-01 77.0% 85.0%
4496745 217.2.1.1 ↗ a+b complex topology › FAD-binding domain-like › CorC/HlyC domain-like › CorC/HlyC domain-like › CorC_HlyC 0.56 40.0 3.80e-01 75.7% 75.6%
4976896 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.55 47.0 4.36e-01 94.6% 81.1%
3964889 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.55 46.0 4.66e-01 94.6% 97.3%
3275824 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 44.0 4.07e-01 95.9% 86.0%
3586280 11.1.1.12 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Filamin 0.52 43.0 3.17e-01 93.2% 37.2%
3763155 10.21.1.0 ↗ beta sandwiches › jelly-roll › Jelly-roll domain in ADAMTS13 › Jelly-roll domain in ADAMTS13 0.52 40.0 2.89e-01 85.1% 35.7%
4027851 227.1.1.0 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.52 37.0 3.05e-01 77.0% 93.8%
3995400 11.1.1.12 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Filamin 0.52 42.0 4.09e-01 93.2% 94.1%
3215393 4.1.1.319 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_Hsr9 0.51 45.0 3.63e-01 100.0% 67.3%
3798179 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 40.0 3.86e-01 91.9% 92.2%
3798175 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 39.0 3.81e-01 93.2% 93.3%
D2 medium residues 8-50_139-223
PDB
Domain cluster: rep: NC_049478.1__YP_009885086.1__HYQ08_gp006__00006__D46-73_91-149_282-310
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF17236.9 best SU10_MCP 91.8 8.00e-26 68.8% 28.9%
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2qlzA02 6.10.250.2960 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.62 36.0 4.35e-01 100.0% 86.0%
3dktA01 3.30.2400.30 Alpha Beta › 2-Layer Sandwich › Major capsid protein gp5 fold › 0.56 50.0 4.55e-01 97.7% 94.1%
6i9gA01 3.30.2400.30 Alpha Beta › 2-Layer Sandwich › Major capsid protein gp5 fold › 0.55 50.0 4.56e-01 100.0% 94.1%
2odxA00 2.60.260.40 Mainly Beta › Sandwich › HSP40/DNAj peptide-binding domain › q5lls5 like domains 0.54 20.0 2.95e-01 83.6% 75.9%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2899245 2485.3.1.10 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › DUF5309 0.84 70.0 4.94e-01 86.7% 89.0%
5031423 212.1.1.0 ↗ a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like 0.55 30.0 2.96e-01 82.0% 47.4%
3267419 601.51.1.7 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-helical domain in phase 1 flagellin › alpha-helical domain in phase 1 flagellin › DUF4460 0.55 37.0 3.39e-01 93.8% 52.1%
2724409 2485.3.1.2 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Linocin_M18 0.55 50.0 3.94e-01 100.0% 95.1%
3618372 2484.1.1.99 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Peptidase_A17 0.51 29.0 3.02e-01 93.0% 56.7%
3260966 70.3.1.0 ↗ beta barrels › beta-clip › SET domain-like › SET domain-like 0.51 37.0 2.73e-01 76.6% 43.9%
D3 medium residues 224-318_357-373
PDB
Domain cluster: rep: IMGVR_UViG_3300028663_000009-3300028663-Ga0309993_1305197__D31-138_182-193
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF17236.9 best SU10_MCP 60.7 2.40e-16 99.1% 34.0%
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3bqwA02 3.30.1930.10 Alpha Beta › 2-Layer Sandwich › capsid protein of prophage fold › capsid protein of prophage domain 0.75 68.0 6.29e-01 96.4% 99.3%
1yueA03 3.30.2320.40 Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › 0.72 65.0 6.36e-01 98.2% 100.0%
3bjqA00 3.90.1690.10 Alpha Beta › Alpha-Beta Complex › phage-related protein like fold › phage-related protein like domain 0.69 64.0 4.62e-01 100.0% 58.4%
2pk8A00 3.30.2320.10 Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › hypothetical protein PF0899 domain 0.69 53.0 5.76e-01 90.2% 95.7%
1ohgA02 3.30.2320.10 Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › hypothetical protein PF0899 domain 0.67 59.0 6.10e-01 96.4% 100.0%
4h0pB02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.59 44.0 3.49e-01 77.7% 81.4%
1g4wR02 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.57 49.0 4.00e-01 96.4% 73.8%
6fgcA01 3.40.980.10 Alpha Beta › 3-Layer(aba) Sandwich › Molybdenum Cofactor Biosythetic Enzyme; Chain A › MoaB/Mog-like domain 0.54 42.0 3.66e-01 84.8% 55.2%
3ghjA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.53 38.0 3.76e-01 73.2% 96.6%
4ifeA02 3.30.420.240 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.53 42.0 3.34e-01 84.8% 76.2%
3c1aA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.52 42.0 3.86e-01 87.5% 83.4%
2qdfA03 3.10.20.310 Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac 0.52 30.0 3.46e-01 90.2% 80.5%
3f4lA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.52 42.0 3.46e-01 92.0% 58.7%
3bz5A02 2.60.40.1220 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 35.0 4.00e-01 96.4% 100.0%
2zw5A02 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.51 36.0 3.62e-01 75.0% 99.2%
ECOD (34)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3965498 2485.3.1.0 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 0.80 73.0 5.07e-01 96.4% 52.8%
3949155 2485.3.1.11 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › SrpI-like 0.77 69.0 5.14e-01 95.5% 56.6%
3583655 2485.3.1.5 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Gp23 0.76 69.0 4.82e-01 96.4% 76.9%
4995674 2485.3.1.5 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Gp23 0.75 70.0 5.26e-01 100.0% 64.3%
2841997 2485.3.1.0 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 0.75 70.0 4.69e-01 97.3% 52.1%
2899245 2485.3.1.10 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › DUF5309 0.75 68.0 4.68e-01 96.4% 51.0%
2968064 2485.3.1.0 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 0.72 67.0 4.57e-01 97.3% 53.5%
5083777 2485.3.1.3 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid 0.72 65.0 4.63e-01 96.4% 48.0%
11367 2485.3.1.6 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › ENCP4 0.69 53.0 5.76e-01 90.2% 95.7%
2989372 2485.3.1.3 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid 0.67 60.0 4.31e-01 95.5% 52.0%
2989340 2485.3.1.3 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid 0.67 60.0 4.25e-01 94.6% 54.6%
2989506 2485.3.1.3 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid 0.65 59.0 4.25e-01 96.4% 58.3%
4079005 298.4.1.6 ↗ a+b two layers › FwdE/GAPDH domain-like › V-type ATPase subunit E › V-type ATPase subunit E › T3SS_SCTL 0.65 49.0 4.79e-01 90.2% 72.0%
4083382 298.4.1.1 ↗ a+b two layers › FwdE/GAPDH domain-like › V-type ATPase subunit E › V-type ATPase subunit E › vATP-synt_E 0.64 44.0 4.53e-01 89.3% 72.7%
4337741 2004.1.1.19 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.60 43.0 3.63e-01 74.1% 78.9%
3448544 211.1.1.1 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase 0.58 36.0 4.29e-01 71.4% 100.0%
4027323 2004.1.1.73 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 0.57 41.0 3.23e-01 74.1% 59.6%
3320881 2004.1.1.406 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PC-Esterase 0.55 44.0 3.80e-01 87.5% 97.8%
3290094 211.1.1.1 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase 0.54 39.0 3.72e-01 74.1% 93.1%
3372525 2004.1.1.250 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd 0.54 46.0 3.30e-01 99.1% 75.8%
3679779 2004.1.1.30 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.54 46.0 3.48e-01 96.4% 79.6%
3583008 2004.1.1.30 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.53 46.0 3.81e-01 96.4% 81.4%
4043365 298.4.1.5 ↗ a+b two layers › FwdE/GAPDH domain-like › V-type ATPase subunit E › V-type ATPase subunit E › ATP-synt_B 0.53 43.0 3.33e-01 89.3% 44.9%
3659833 2007.5.1.17 ↗ a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › PC-Esterase 0.53 43.0 3.37e-01 89.3% 96.9%
3459959 192.8.1.454 ↗ alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › Kinesin 0.53 45.0 3.19e-01 98.2% 71.2%
3413370 2007.5.1.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase 0.53 43.0 3.33e-01 90.2% 91.3%
3960458 2003.1.1.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.53 38.0 3.37e-01 76.8% 62.9%
4947158 316.1.1.0 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase 0.53 42.0 3.36e-01 85.7% 61.7%
3815575 2007.5.1.20 ↗ a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › PC-Esterase,PMR5N 0.52 44.0 3.21e-01 95.5% 95.2%
4022262 2004.1.1.73 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 0.52 46.0 3.57e-01 99.1% 96.5%
2725382 2004.1.1.73 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 0.52 37.0 3.02e-01 74.1% 67.0%
3319246 2007.5.1.17 ↗ a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › PC-Esterase 0.51 43.0 3.41e-01 93.8% 89.5%
3428250 2007.5.1.20 ↗ a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › PC-Esterase,PMR5N 0.51 43.0 3.06e-01 93.8% 81.7%
3926292 2007.1.1.36 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › HSNSD_N 0.50 39.0 3.27e-01 86.6% 94.1%