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ON286972.1__USL83518.1__A4_442__00197
Bact-VirON286972.1__USL83518.1__A4_442__00197
Identity
- Accession:
- ON286972 ↗
- Kingdom:
- phage
Quality
50.5
mean pLDDT
Taxonomy
TaxID: 2950725
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-49
Domain cluster:
representative
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6cnzF00 | 1.20.59.10 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase | 0.76 | 69.0 | 4.71e-01 | 100.0% | 51.9% |
| 2o38A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.75 | 64.0 | 5.83e-01 | 95.9% | 100.0% |
| 5axmB00 | 3.30.70.3000 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) | 0.74 | 62.0 | 4.04e-01 | 100.0% | 20.5% |
| 3a7mA01 | 1.20.58.380 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Flagellar protein flit. | 0.73 | 53.0 | 4.05e-01 | 77.6% | 41.8% |
| 6wshA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 60.0 | 5.85e-01 | 95.9% | 98.2% |
| 2e62A01 | 6.10.140.420 | Special › Helix non-globular › Helix Hairpins › | 0.70 | 54.0 | 5.35e-01 | 83.7% | 78.8% |
| 4dhiB02 | 1.20.1300.20 | Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Peptidase C65 Otubain, subdomain 2 | 0.70 | 58.0 | 4.20e-01 | 95.9% | 42.8% |
| 1s8nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 58.0 | 5.60e-01 | 98.0% | 98.3% |
| 1ufhA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.70 | 61.0 | 4.32e-01 | 100.0% | 92.3% |
| 4h8aB01 | 1.10.1530.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical Oxidoreductase Yiak; Chain: A, domain 1 › Malate/L-lactate/L-sulpholactate dehydrogenase, four-helix barrel | 0.70 | 54.0 | 5.13e-01 | 87.8% | 83.3% |
| 1gjsA00 | 1.10.8.40 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Albumin-binding domain | 0.70 | 58.0 | 5.43e-01 | 100.0% | 83.1% |
| 2c9oB03 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.69 | 55.0 | 4.60e-01 | 87.8% | 55.4% |
| 3uk6A02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.69 | 55.0 | 4.59e-01 | 87.8% | 55.4% |
| 2om6A02 | 1.10.150.400 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.68 | 52.0 | 4.47e-01 | 83.7% | 53.2% |
| 3h4cA02 | 1.10.472.110 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › | 0.67 | 56.0 | 4.31e-01 | 93.9% | 70.0% |
| 1yt3A03 | 1.10.150.80 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › HRDC domain | 0.67 | 58.0 | 4.93e-01 | 100.0% | 76.8% |
| 4nlbA02 | 1.10.150.80 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › HRDC domain | 0.66 | 59.0 | 4.78e-01 | 100.0% | 67.0% |
| 5dukB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 44.0 | 3.98e-01 | 71.4% | 50.7% |
| 4kjmA02 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.65 | 52.0 | 5.17e-01 | 100.0% | 96.4% |
| 1vq8P03 | 1.10.1200.60 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › | 0.65 | 52.0 | 5.11e-01 | 100.0% | 98.2% |
| 3e46A02 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.65 | 48.0 | 5.06e-01 | 87.8% | 95.3% |
| 3l2pA01 | 1.10.3260.10 | Mainly Alpha › Orthogonal Bundle › DNA ligase i, domain 1 › DNA ligase, ATP-dependent, N-terminal domain | 0.64 | 52.0 | 3.50e-01 | 93.9% | 24.2% |
| 2fnaA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.64 | 47.0 | 4.26e-01 | 85.7% | 61.8% |
| 7n1nB01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.64 | 47.0 | 4.33e-01 | 79.6% | 90.5% |
| 1nvmA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.63 | 47.0 | 4.39e-01 | 83.7% | 68.8% |
| 4m70B00 | 1.10.246.200 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › WPP domain | 0.63 | 54.0 | 4.50e-01 | 100.0% | 93.4% |
| 3l6dA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.63 | 55.0 | 4.08e-01 | 98.0% | 62.2% |
| 4yg1A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.63 | 49.0 | 4.40e-01 | 87.8% | 81.9% |
| 3hx3A01 | 1.10.8.20 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › N-terminal domain of phosphatidylinositol transfer protein sec14p | 0.63 | 53.0 | 4.80e-01 | 95.9% | 94.0% |
| 3g2bA00 | 1.10.10.1150 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Coenzyme PQQ synthesis protein D (PqqD) | 0.62 | 42.0 | 3.53e-01 | 71.4% | 38.9% |
| 1tfeA02 | 1.10.286.20 | Mainly Alpha › Orthogonal Bundle › GTP Cyclohydrolase I; Chain A, domain 1 › | 0.62 | 46.0 | 4.71e-01 | 85.7% | 88.9% |
| 4hjzA00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.62 | 51.0 | 3.55e-01 | 100.0% | 25.7% |
| 2ahoB02 | 1.10.150.190 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Translation initiation factor 2; subunit 1; domain 2 | 0.61 | 49.0 | 4.20e-01 | 100.0% | 80.2% |
| 2kwpA00 | 3.30.1480.10 | Alpha Beta › 2-Layer Sandwich › N Utilization Substance Protein A; Chain:P; domain 4 › NusA, N-terminal domain | 0.60 | 53.0 | 3.86e-01 | 98.0% | 66.7% |
| 2k85A00 | 1.10.10.440 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain | 0.60 | 43.0 | 3.97e-01 | 77.6% | 64.6% |
| 4bfmA00 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.59 | 49.0 | 3.07e-01 | 98.0% | 50.2% |
| 1xb2B01 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.57 | 42.0 | 4.03e-01 | 87.8% | 68.3% |
| 1fu1A01 | 2.170.210.10 | Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › DNA double-strand break repair and VJ recombination XRCC4, N-terminal | 0.57 | 42.0 | 3.37e-01 | 85.7% | 91.5% |
| 2dzlA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.56 | 45.0 | 4.23e-01 | 100.0% | 74.2% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4991198 | 2.1.1.359 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › HupF_HypC | 0.91 | 67.0 | 4.93e-01 | 77.6% | 33.0% |
| 3914715 | 605.1.1.235 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › BicD | 0.82 | 75.0 | 6.43e-01 | 100.0% | 84.0% |
| 3521681 | 108.1.1.97 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_7 | 0.76 | 67.0 | 5.45e-01 | 98.0% | 77.8% |
| 5058630 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.76 | 62.0 | 5.62e-01 | 89.8% | 93.8% |
| 4099056 | 3236.1.1.3 ↗ | alpha complex topology › Cation-proton antiporter › Cation-proton antiporter (CPA) › Cation-proton antiporter (CPA) › Mem_trans | 0.76 | 66.0 | 4.03e-01 | 98.0% | 50.5% |
| 5049467 | 7064.1.1.1 ↗ | alpha bundles › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 › VIT1 | 0.75 | 57.0 | 3.98e-01 | 83.7% | 25.6% |
| 3917977 | 108.1.1.73 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 | 0.75 | 67.0 | 5.45e-01 | 100.0% | 78.9% |
| 3547115 | 108.1.1.29 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_7 | 0.75 | 65.0 | 5.30e-01 | 98.0% | 76.7% |
| 3297509 | 148.1.3.318 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › PF28551 | 0.74 | 64.0 | 5.73e-01 | 100.0% | 87.1% |
| 4968900 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.73 | 57.0 | 5.60e-01 | 87.8% | 90.7% |
| 4948827 | 304.137.1.0 ↗ | a+b two layers › Alpha-beta plaits › NOL1/NOP2/sun N-terminal ferredoxin-like domain › NOL1/NOP2/sun N-terminal ferredoxin-like domain | 0.72 | 49.0 | 4.23e-01 | 73.5% | 43.8% |
| 185993 | 6026.1.1.1 ↗ | alpha duplicates or obligate multimers › cwf21 domain › cwf21 domain › cwf21 domain › cwf21 | 0.70 | 54.0 | 5.05e-01 | 83.7% | 67.2% |
| 3720809 | 5038.2.1.1 ↗ | alpha superhelices › Cytochrome c oxidase subunit I-like › MAPEG domain-like › MAPEG domain-like › MAPEG | 0.69 | 56.0 | 4.33e-01 | 100.0% | 61.5% |
| 3824070 | 103.1.1.109 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › PF28551 | 0.68 | 59.0 | 5.42e-01 | 100.0% | 92.3% |
| 4964973 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.65 | 47.0 | 4.88e-01 | 81.6% | 97.8% |
| 1159103 | 4095.1.1.1 ↗ | alpha bundles › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › DNA_ligase_A_N | 0.64 | 52.0 | 4.17e-01 | 93.9% | 46.6% |
| 3351741 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.64 | 55.0 | 3.85e-01 | 93.9% | 58.7% |
| 3253225 | 130.1.1.1 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › SAP | 0.62 | 45.0 | 3.77e-01 | 77.6% | 68.2% |
| 3971161 | 308.2.1.0 ↗ | a+b two layers › ClpS-like › Penicillin binding protein ClpS-like domain › Penicillin binding protein ClpS-like domain | 0.62 | 47.0 | 4.25e-01 | 87.8% | 60.0% |