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ON287369.1__URC22316.1__CHUUTOTORO_02310__00212

Bact-Vir

ON287369.1__URC22316.1__CHUUTOTORO_02310__00212

Identity

Accession:
ON287369 ↗
Kingdom:
phage

Quality

66.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Serratia_phage_vB_SmaM-ChuuTotoro

TaxID: 2943832

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 15-70
PDB
Domain cluster: representative
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4e6zA01 3.40.1350.100 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.67 60.0 4.77e-01 100.0% 52.3%
2mheA00 3.30.70.2400 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Uncharacterised protein PF13773, DUF4170 0.62 55.0 5.03e-01 100.0% 82.4%
1svdM00 3.30.190.10 Alpha Beta › 2-Layer Sandwich › Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase › Ribulose bisphosphate carboxylase, small subunit 0.59 51.0 4.18e-01 100.0% 51.9%
1yk9A00 3.30.70.1230 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain 0.59 48.0 3.50e-01 100.0% 65.2%
6s2wA01 3.30.2260.10 Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary 0.59 50.0 4.45e-01 98.2% 78.0%
1mg7A01 3.30.70.1000 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Switch protein XOL-1, GHMP-like 0.56 46.0 3.40e-01 100.0% 77.1%
6aj3B00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.55 45.0 3.41e-01 100.0% 55.4%
2wbmA03 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 46.0 4.37e-01 98.2% 98.6%
1rlhA02 3.40.1520.10 Alpha Beta › 3-Layer(aba) Sandwich › hypothetical protein tt1634 › Ta1353-like 0.54 45.0 3.81e-01 98.2% 100.0%
5cw3C01 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.54 46.0 3.44e-01 98.2% 48.3%
6se8A04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 44.0 3.67e-01 100.0% 52.8%
7yh1A01 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.53 37.0 3.00e-01 75.0% 71.9%
1jlxA01 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.51 41.0 3.15e-01 100.0% 95.0%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4326572 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.64 57.0 5.13e-01 98.2% 81.3%
5054467 304.128.1.0 ↗ a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB 0.59 50.0 4.52e-01 100.0% 95.0%
4933260 304.128.1.0 ↗ a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB 0.58 48.0 4.22e-01 96.4% 94.4%
5027386 304.128.1.0 ↗ a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB 0.58 49.0 4.50e-01 96.4% 97.3%
3300115 221.1.1.76 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA_2 0.56 48.0 3.99e-01 100.0% 69.5%
5049192 304.4.1.0 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.54 45.0 4.07e-01 100.0% 88.2%
4996897 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.53 37.0 2.86e-01 76.8% 70.7%
5011220 304.4.1.0 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.52 43.0 3.94e-01 100.0% 68.8%
3977819 304.147.1.0 ↗ a+b two layers › Alpha-beta plaits › Tetrahydrodipicolinate acetyltransferase N-terminal domain › Tetrahydrodipicolinate acetyltransferase N-terminal domain 0.51 41.0 4.12e-01 98.2% 98.3%
2770883 205.1.1.19 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_13 0.51 42.0 3.92e-01 96.4% 100.0%