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ON287373.1__URC22594.1__KAMAJI_01670__00151
Bact-VirON287373.1__URC22594.1__KAMAJI_01670__00151
Identity
- Accession:
- ON287373 ↗
- Kingdom:
- phage
Quality
67.3
mean pLDDT
Taxonomy
TaxID: 2943833
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 29-99
Domain cluster:
representative
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2retA00 | 3.30.1300.30 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like | 0.70 | 47.0 | 4.49e-01 | 91.5% | 59.5% |
| 3ci0I00 | 3.30.1300.30 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like | 0.69 | 47.0 | 4.46e-01 | 91.5% | 60.2% |
| 1ugiD00 | 3.10.450.20 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Bacteriophage PBS2, uracil-glycosylase inhibitor | 0.68 | 52.0 | 4.96e-01 | 93.0% | 72.0% |
| 4aq1A04 | 2.60.40.3450 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.64 | 49.0 | 4.03e-01 | 81.7% | 69.3% |
| 5mj3A03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 45.0 | 4.22e-01 | 77.5% | 78.2% |
| 1qwoA01 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.62 | 51.0 | 3.24e-01 | 94.4% | 96.2% |
| 6lgqC01 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.60 | 48.0 | 3.91e-01 | 85.9% | 96.9% |
| 6bnzA02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.60 | 40.0 | 3.24e-01 | 85.9% | 35.0% |
| 1dmlA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.59 | 49.0 | 3.38e-01 | 93.0% | 44.9% |
| 1jc4A00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.59 | 40.0 | 3.22e-01 | 88.7% | 35.2% |
| 1e8oA00 | 3.30.720.10 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 | 0.59 | 45.0 | 4.46e-01 | 85.9% | 78.4% |
| 1qmoE01 | 2.60.40.4220 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 48.0 | 4.59e-01 | 90.1% | 95.2% |
| 4bf3A00 | 2.30.31.50 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Borrelia outer surface protein E/F | 0.58 | 47.0 | 3.88e-01 | 90.1% | 77.4% |
| 6ci7A01 | 3.30.160.660 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.58 | 50.0 | 4.22e-01 | 97.2% | 90.2% |
| 4mtsA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.58 | 39.0 | 3.23e-01 | 85.9% | 38.0% |
| 1sxjH01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.57 | 48.0 | 4.02e-01 | 94.4% | 96.8% |
| 4jklA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 42.0 | 3.88e-01 | 81.7% | 76.8% |
| 3g7kA01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.56 | 44.0 | 3.33e-01 | 88.7% | 56.6% |
| 2dbjA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 43.0 | 3.79e-01 | 84.5% | 76.1% |
| 2bklA02 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.55 | 47.0 | 2.99e-01 | 93.0% | 26.6% |
| 3e8lC00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.55 | 46.0 | 3.58e-01 | 98.6% | 59.7% |
| 1y8cA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.54 | 36.0 | 3.87e-01 | 91.5% | 81.7% |
| 1plqA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.54 | 47.0 | 3.24e-01 | 100.0% | 93.4% |
| 2qm4A01 | 2.170.210.10 | Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › DNA double-strand break repair and VJ recombination XRCC4, N-terminal | 0.53 | 45.0 | 3.62e-01 | 94.4% | 79.7% |
| 2bg1A02 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.53 | 42.0 | 2.87e-01 | 93.0% | 67.6% |
| 2bolA03 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 43.0 | 3.91e-01 | 88.7% | 67.7% |
| 6w1kA01 | 3.10.180.50 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › | 0.52 | 36.0 | 2.51e-01 | 74.6% | 83.8% |
| 2aq5A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 47.0 | 2.97e-01 | 100.0% | 27.8% |
| 1lwrA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 38.0 | 3.51e-01 | 81.7% | 78.1% |
| 1wznA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.51 | 37.0 | 4.06e-01 | 90.1% | 98.2% |
| 6fopA01 | 2.70.98.30 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 | 0.50 | 39.0 | 2.85e-01 | 88.7% | 45.6% |
| 3mswA00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.50 | 41.0 | 3.26e-01 | 93.0% | 44.6% |
| 2eenA00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.50 | 44.0 | 3.30e-01 | 98.6% | 40.7% |
ECOD (53)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4380331 | 295.1.1.27 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PF25991 | 0.71 | 48.0 | 4.87e-01 | 97.2% | 71.4% |
| 4655950 | 274.1.1.4 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › T2SSI | 0.69 | 49.0 | 4.12e-01 | 93.0% | 45.2% |
| 3984883 | 274.1.1.4 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › T2SSI | 0.69 | 48.0 | 4.02e-01 | 91.5% | 44.3% |
| 3581254 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.66 | 46.0 | 5.13e-01 | 91.5% | 94.5% |
| 3971209 | 274.1.1.4 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › T2SSI | 0.65 | 44.0 | 3.83e-01 | 90.1% | 45.5% |
| 3249582 | 896.1.1.3 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › SRP9-21 | 0.65 | 47.0 | 4.63e-01 | 81.7% | 72.0% |
| 3923911 | 896.1.1.3 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › SRP9-21 | 0.65 | 47.0 | 4.65e-01 | 80.3% | 72.0% |
| 3940929 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.64 | 54.0 | 3.43e-01 | 97.2% | 19.5% |
| 3192965 | 2004.1.1.26 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin | 0.64 | 46.0 | 2.90e-01 | 76.1% | 52.1% |
| 5017700 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.64 | 48.0 | 3.10e-01 | 78.9% | 40.6% |
| 3221575 | 2003.1.5.13 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth | 0.64 | 51.0 | 3.31e-01 | 97.2% | 20.3% |
| 4144852 | 220.1.1.126 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Ycf4 | 0.63 | 52.0 | 4.56e-01 | 91.5% | 85.2% |
| 5014253 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.63 | 43.0 | 4.33e-01 | 95.8% | 70.0% |
| 4028705 | 216.1.1.4 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › RWD | 0.63 | 41.0 | 3.41e-01 | 88.7% | 39.2% |
| 3697999 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.62 | 52.0 | 3.55e-01 | 91.5% | 39.2% |
| 3701349 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.62 | 52.0 | 3.20e-01 | 93.0% | 65.0% |
| 5059287 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 50.0 | 4.55e-01 | 87.3% | 90.5% |
| 3414142 | 109.27.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain | 0.61 | 45.0 | 3.41e-01 | 77.5% | 41.8% |
| 4960403 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.61 | 35.0 | 3.23e-01 | 90.1% | 44.4% |
| 3712993 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.61 | 48.0 | 4.75e-01 | 94.4% | 80.0% |
| 3606814 | 896.1.1.0 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related | 0.60 | 46.0 | 4.50e-01 | 81.7% | 74.4% |
| 3507165 | 719.1.1.1 ↗ | beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › XRCC4 | 0.60 | 49.0 | 4.15e-01 | 93.0% | 92.0% |
| 3230630 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.60 | 49.0 | 3.19e-01 | 97.2% | 20.7% |
| 3939453 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.60 | 52.0 | 4.24e-01 | 95.8% | 89.2% |
| 3606828 | 241.15.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain | 0.58 | 49.0 | 4.08e-01 | 94.4% | 72.3% |
| 3464033 | 844.1.1.2 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR | 0.58 | 40.0 | 2.96e-01 | 71.8% | 70.3% |
| 4947810 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.58 | 39.0 | 3.29e-01 | 70.4% | 56.7% |
| 3977405 | 4312.1.1.4 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › Gp49 | 0.57 | 38.0 | 3.45e-01 | 94.4% | 48.0% |
| 3534499 | 227.1.1.12 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 | 0.57 | 47.0 | 3.82e-01 | 94.4% | 94.5% |
| 3337748 | 375.1.1.9 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-C4_Topoisom | 0.56 | 39.0 | 4.04e-01 | 76.1% | 81.5% |
| 3597697 | 5.1.1.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed | 0.55 | 44.0 | 3.31e-01 | 91.5% | 53.5% |
| 3741704 | 719.1.1.2 ↗ | beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › XLF | 0.55 | 46.0 | 3.82e-01 | 93.0% | 89.2% |
| 3620871 | 883.1.1.1 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP | 0.55 | 45.0 | 3.29e-01 | 97.2% | 93.3% |
| 3788776 | 5.1.4.38 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC1 | 0.55 | 49.0 | 3.15e-01 | 100.0% | 28.4% |
| 3796890 | 883.1.1.0 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like | 0.55 | 43.0 | 3.22e-01 | 94.4% | 92.0% |
| 4159356 | 2004.1.1.429 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_15 | 0.54 | 40.0 | 2.55e-01 | 80.3% | 28.1% |
| 3992780 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.54 | 48.0 | 3.26e-01 | 100.0% | 37.4% |
| 3799340 | 5.1.3.114 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › MIOS_WD40 | 0.54 | 48.0 | 3.08e-01 | 100.0% | 39.4% |
| 4026008 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.54 | 38.0 | 3.65e-01 | 84.5% | 62.4% |
| 3500713 | 220.1.1.56 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › ASK_PH | 0.54 | 42.0 | 3.65e-01 | 90.1% | 84.0% |
| 4944741 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.54 | 38.0 | 3.09e-01 | 74.6% | 77.9% |
| 3640668 | 719.1.1.2 ↗ | beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › XLF | 0.53 | 42.0 | 3.67e-01 | 94.4% | 95.2% |
| 3395155 | 11.1.1.426 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › NDNF | 0.53 | 40.0 | 3.38e-01 | 81.7% | 80.8% |
| 3717304 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.53 | 45.0 | 3.03e-01 | 97.2% | 78.9% |
| 3394646 | 241.15.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain | 0.53 | 47.0 | 3.43e-01 | 97.2% | 69.5% |
| 3933101 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.53 | 41.0 | 3.71e-01 | 91.5% | 62.1% |
| 3593518 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.52 | 43.0 | 3.40e-01 | 100.0% | 80.0% |
| 3613921 | 330.1.1.22 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › PF26536 | 0.52 | 39.0 | 3.31e-01 | 81.7% | 48.0% |
| 3830081 | 5.1.3.65 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF295 | 0.51 | 45.0 | 2.92e-01 | 98.6% | 80.9% |
| 3513352 | 241.15.1.3 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › SPC25 | 0.51 | 45.0 | 3.86e-01 | 97.2% | 72.2% |
| 3675472 | 5.1.5.45 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PROPPIN | 0.51 | 46.0 | 3.15e-01 | 100.0% | 29.4% |
| 5006954 | 2004.1.1.1217 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF7125 | 0.51 | 37.0 | 2.70e-01 | 81.7% | 93.0% |
| 3575253 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.50 | 38.0 | 3.84e-01 | 95.8% | 82.9% |