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ON287374.1__URC22689.1__KASHIRA_01150__00095
Bact-VirON287374.1__URC22689.1__KASHIRA_01150__00095
Identity
- Accession:
- ON287374 ↗
- Kingdom:
- phage
Quality
95.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-52
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2jrmA00 | 1.10.10.620 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › ribosome modulation factor like domain | 0.79 | 66.0 | 6.20e-01 | 100.0% | 76.7% |
| 3dnfA03 | 3.40.1010.20 | Alpha Beta › 3-Layer(aba) Sandwich › Cobalt-precorrin-4 Transmethylase; domain 1 › 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, catalytic domain | 0.73 | 58.0 | 4.68e-01 | 93.9% | 44.4% |
| 2qffA00 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.66 | 45.0 | 3.91e-01 | 71.4% | 48.6% |
| 4fcyA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.66 | 52.0 | 4.52e-01 | 89.8% | 61.5% |
| 3lphC00 | 6.10.140.630 | Special › Helix non-globular › Helix Hairpins › | 0.65 | 46.0 | 4.35e-01 | 75.5% | 100.0% |
| 3anwA01 | 1.20.58.1030 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 45.0 | 3.59e-01 | 98.0% | 33.6% |
| 1s35A01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 50.0 | 3.96e-01 | 85.7% | 86.1% |
| 3m6jA01 | 1.20.1260.40 | Mainly Alpha › Up-down Bundle › Ferritin › | 0.64 | 49.0 | 3.72e-01 | 83.7% | 68.4% |
| 1bc0A03 | 1.10.220.10 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin | 0.63 | 52.0 | 4.38e-01 | 93.9% | 66.3% |
| 1xeqB00 | 1.10.287.10 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › S15/NS1, RNA-binding | 0.63 | 51.0 | 4.31e-01 | 91.8% | 81.2% |
| 1ybzA00 | 1.20.59.10 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase | 0.62 | 48.0 | 4.36e-01 | 93.9% | 76.3% |
| 3t6gB00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.61 | 51.0 | 3.70e-01 | 91.8% | 70.9% |
| 2i1yA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.61 | 52.0 | 3.27e-01 | 100.0% | 21.3% |
| 3k3uA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.60 | 48.0 | 3.63e-01 | 95.9% | 48.9% |
| 2gsqA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.60 | 52.0 | 4.11e-01 | 100.0% | 75.0% |
| 8d7hD01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.60 | 48.0 | 3.32e-01 | 89.8% | 51.4% |
| 1ydxA02 | 1.10.287.1120 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein | 0.60 | 42.0 | 3.47e-01 | 75.5% | 64.4% |
| 1vjxA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.59 | 48.0 | 3.44e-01 | 91.8% | 58.4% |
| 3fkjA02 | 1.10.10.2240 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.59 | 48.0 | 4.56e-01 | 100.0% | 81.2% |
| 3w0lD02 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.58 | 48.0 | 2.97e-01 | 100.0% | 14.0% |
| 4qndA00 | 1.20.1280.290 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.58 | 49.0 | 4.02e-01 | 100.0% | 75.3% |
| 2ra1A03 | 1.20.58.770 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.58 | 48.0 | 4.49e-01 | 95.9% | 93.7% |
| 3purA03 | 1.20.58.1360 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.57 | 46.0 | 3.68e-01 | 95.9% | 71.8% |
| 1bvp103 | 1.10.170.10 | Mainly Alpha › Orthogonal Bundle › Bluetongue Virus 10, subunit 1; domain 3 › Bluetongue Virus 10, subunit 1, domain 3 | 0.53 | 38.0 | 3.13e-01 | 77.6% | 57.3% |
| 3bg2A03 | 1.10.3410.10 | Mainly Alpha › Orthogonal Bundle › putative deoxyguanosinetriphosphate triphosphohydrolase fold › putative deoxyguanosinetriphosphate triphosphohydrolase like domain | 0.51 | 38.0 | 3.05e-01 | 79.6% | 89.6% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4407662 | 6028.1.1.1 ↗ | alpha bundles › Ribosome modulation factor › Ribosome modulation factor › Ribosome modulation factor › RMF | 0.89 | 76.0 | 7.13e-01 | 98.0% | 76.7% |
| 3852964 | 101.1.17.14 ↗ | alpha arrays › HTH › HTH › FF domain › ANATO | 0.85 | 73.0 | 6.25e-01 | 98.0% | 61.3% |
| 3213789 | 389.1.1.0 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin | 0.82 | 75.0 | 7.23e-01 | 100.0% | 89.1% |
| 4956327 | 2004.1.3.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR | 0.77 | 68.0 | 4.60e-01 | 100.0% | 30.6% |
| 4438504 | 7000.1.1.0 ↗ | alpha arrays › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS | 0.72 | 61.0 | 5.61e-01 | 98.0% | 78.5% |
| 4554168 | 1079.1.1.13 ↗ | alpha complex topology › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Mntp | 0.72 | 61.0 | 4.24e-01 | 100.0% | 80.0% |
| 4499345 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.71 | 59.0 | 5.92e-01 | 100.0% | 100.0% |
| 4857875 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.66 | 45.0 | 3.80e-01 | 71.4% | 83.3% |
| 3927006 | 603.1.1.99 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF27021 | 0.62 | 48.0 | 3.95e-01 | 85.7% | 86.7% |
| 4843075 | 5057.1.1.1 ↗ | alpha bundles › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neur_chan_memb | 0.60 | 50.0 | 4.06e-01 | 93.9% | 74.0% |
| 3909150 | 5063.1.1.15 ↗ | alpha bundles › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › OCIA | 0.59 | 42.0 | 3.58e-01 | 73.5% | 57.3% |
| 3538607 | 150.3.1.2 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › 4-helical cytokines › 4-helical cytokine › Interferon | 0.59 | 48.0 | 3.41e-01 | 98.0% | 80.6% |
| 5056690 | 5060.2.1.1 ↗ | alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › T2SSF | 0.59 | 51.0 | 3.86e-01 | 100.0% | 72.8% |
| 4964824 | 101.1.6.44 ↗ | alpha arrays › HTH › HTH › TrpR › HVO_2833_C | 0.59 | 46.0 | 3.78e-01 | 93.9% | 59.0% |
| 3966077 | 101.26.1.1 ↗ | alpha arrays › HTH › Tex N-terminal domain › Tex N-terminal domain › Tex_N | 0.57 | 50.0 | 4.43e-01 | 98.0% | 87.1% |
| 3812592 | 109.4.1.1948 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Zw10_middle | 0.56 | 48.0 | 3.42e-01 | 100.0% | 57.5% |
| 4669461 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.53 | 45.0 | 2.77e-01 | 95.9% | 48.9% |