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ON287375.1__UQT03316.1__YUBABA_01100__00110

Bact-Vir

ON287375.1__UQT03316.1__YUBABA_01100__00110

Identity

Accession:
ON287375 ↗
Kingdom:
phage

Quality

87.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chimalliviridae› Petsuvirus› Serratia_phage_vB_SmaM-Yubaba

TaxID: 2943838

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-78
PDB
Domain cluster: representative
CATH (23)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ns4A00 1.10.357.110 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Vacuolar protein sorting-associated protein 53, C-terminus 0.77 43.0 3.10e-01 70.5% 21.5%
2e62A01 6.10.140.420 Special › Helix non-globular › Helix Hairpins › 0.76 38.0 4.57e-01 79.5% 73.1%
2uv8A07 6.10.140.1410 Special › Helix non-globular › Helix Hairpins › 0.70 47.0 4.61e-01 73.1% 63.5%
2vkzA02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.70 47.0 3.24e-01 73.1% 20.6%
1s35A01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.69 39.0 3.55e-01 70.5% 42.6%
1ydxA02 1.10.287.1120 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein 0.68 45.0 4.32e-01 70.5% 58.9%
3txsC01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.66 38.0 3.94e-01 70.5% 58.7%
4h33A00 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.63 42.0 4.04e-01 83.3% 59.3%
2gtsA00 1.10.287.850 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain 0.61 42.0 4.25e-01 70.5% 76.6%
4abmD00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.61 38.0 3.88e-01 70.5% 63.6%
1cunA01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.61 39.0 3.61e-01 71.8% 50.0%
4l0rB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.60 41.0 4.21e-01 71.8% 74.0%
2i7uA00 6.10.250.1010 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.60 35.0 3.87e-01 70.5% 72.6%
4gx0A01 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.60 42.0 3.77e-01 71.8% 69.9%
4w4kA00 1.10.287.850 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain 0.58 40.0 4.00e-01 71.8% 69.5%
4hr1A00 1.20.1270.410 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.58 46.0 3.98e-01 84.6% 86.4%
1p49A02 1.10.287.550 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.57 33.0 3.67e-01 74.4% 72.9%
6tkvA01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.55 37.0 3.89e-01 71.8% 79.4%
3lxrF00 1.10.4120.20 Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › 0.53 39.0 3.05e-01 78.2% 34.3%
6nyyE01 1.20.58.760 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Peptidase M41 0.53 38.0 3.09e-01 78.2% 80.9%
3ihuA02 1.20.120.530 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like 0.53 40.0 3.33e-01 80.8% 54.0%
1u7lA02 1.20.1460.10 Mainly Alpha › Up-down Bundle › subunit c (vma5p) of the yeast v-atpase, domain 2 › subunit c (vma5p) of the yeast v-atpase, domain 2 0.53 43.0 3.30e-01 89.7% 51.9%
2rdcA00 1.10.287.800 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › protein ne1242 0.50 43.0 3.67e-01 97.4% 58.6%
ECOD (34)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3600712 192.5.1.0 ↗ alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat 0.71 40.0 3.92e-01 71.8% 50.6%
3399338 605.1.1.24 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › ACP53EA 0.68 47.0 4.40e-01 73.1% 87.0%
3284147 150.5.1.52 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › PE 0.68 46.0 4.19e-01 70.5% 60.0%
3211461 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.67 46.0 3.53e-01 70.5% 83.5%
3291596 150.5.1.52 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › PE 0.67 47.0 4.30e-01 71.8% 63.0%
4964984 5058.1.1.0 ↗ alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region 0.65 40.0 3.72e-01 75.6% 48.0%
3214360 148.1.1.0 ↗ alpha arrays › Histone-like › Histone-related › Histone 0.65 42.0 4.15e-01 76.9% 61.2%
4946656 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.64 41.0 3.56e-01 73.1% 43.3%
3810801 632.22.1.139 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › KIF21A_4th 0.60 42.0 3.36e-01 71.8% 40.0%
3839497 150.5.1.0 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like 0.60 41.0 4.03e-01 70.5% 69.4%
5040210 5058.1.1.0 ↗ alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region 0.59 39.0 3.69e-01 70.5% 55.8%
4423918 5045.1.1.1 ↗ alpha bundles › F1F0 ATP synthase subunit A › F1F0 ATP synthase subunit A › F1F0 ATP synthase subunit A › ATP-synt_A 0.58 45.0 3.27e-01 87.2% 95.2%
3314055 5042.1.1.0 ↗ extended segments › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region 0.58 40.0 4.14e-01 73.1% 82.4%
4030097 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.57 42.0 2.83e-01 83.3% 17.8%
4010416 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.57 40.0 3.41e-01 73.1% 56.0%
3470544 604.1.1.1 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.57 38.0 3.66e-01 70.5% 60.0%
4324499 3755.1.1.3 ↗ alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related › SPAM 0.57 39.0 3.17e-01 70.5% 41.4%
3646439 192.8.1.263 ↗ alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › DUF7615 0.57 39.0 3.84e-01 71.8% 67.1%
3507551 192.5.1.0 ↗ alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat 0.56 39.0 3.71e-01 71.8% 60.0%
3483993 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.56 38.0 3.56e-01 70.5% 56.0%
3588113 5042.1.1.1 ↗ extended segments › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region › CorA 0.56 38.0 4.10e-01 71.8% 90.8%
1252173 4121.1.1.1 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA 0.56 45.0 3.22e-01 91.0% 37.5%
3564106 604.1.1.1 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.55 35.0 3.21e-01 71.8% 47.6%
3487862 212.1.1.0 ↗ a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like 0.55 39.0 2.76e-01 74.4% 25.0%
3727638 3343.1.1.2 ↗ alpha complex topology › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) › GCP_C_terminal,GCP_N_terminal 0.55 47.0 2.74e-01 93.6% 23.7%
5002748 605.1.1.1 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.55 38.0 3.96e-01 73.1% 76.0%
3337008 192.2.1.60 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › KIF21A_4th 0.54 40.0 3.25e-01 76.9% 92.9%
3781013 3291.1.1.170 ↗ alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › WWC1 0.53 39.0 3.21e-01 75.6% 87.4%
2622460 3396.1.1.1 ↗ extended segments › HIG1 domain family member 1A › HIG1 domain family member 1A › HIG1 domain family member 1A › HIG_1_N 0.53 33.0 3.45e-01 71.8% 70.0%
4247116 192.7.1.2 ↗ alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.52 38.0 3.36e-01 76.9% 54.5%
3261777 4177.1.1.8 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR_3 0.51 44.0 3.17e-01 94.9% 82.2%
3608116 5086.1.1.177 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › KIF9 0.51 34.0 2.88e-01 70.5% 86.2%
4521514 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.50 37.0 3.82e-01 78.2% 82.7%
3240501 604.1.1.1 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.50 40.0 3.28e-01 85.9% 71.4%
D2 high residues 85-137
PDB
Domain cluster: representative
CATH (76)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1df0A02 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.80 64.0 5.29e-01 100.0% 50.0%
4kbmB01 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.79 66.0 6.54e-01 100.0% 89.1%
2eyqA05 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.77 65.0 6.29e-01 100.0% 84.7%
2evrA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 65.0 5.83e-01 100.0% 85.1%
4oxwA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.71 55.0 4.39e-01 84.9% 82.1%
2rajA02 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.69 53.0 4.03e-01 84.9% 67.5%
6vp6A03 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.69 56.0 3.45e-01 92.5% 24.5%
1xteA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.69 53.0 4.18e-01 86.8% 75.0%
2v14A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.67 51.0 3.87e-01 84.9% 64.2%
2lqkA00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.67 58.0 5.33e-01 100.0% 77.1%
2lt1A00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.67 56.0 5.11e-01 98.1% 77.3%
7oufB01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.66 49.0 3.63e-01 83.0% 55.7%
3zuaA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.65 51.0 3.95e-01 100.0% 35.9%
3oyyA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.65 56.0 5.26e-01 100.0% 81.8%
5l37C00 2.40.50.220 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › EutN/Ccml 0.65 51.0 4.42e-01 88.7% 89.5%
3iq2A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.65 49.0 3.86e-01 86.8% 75.6%
2fkbC00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.64 46.0 3.23e-01 77.4% 68.9%
4rbnA01 3.10.450.330 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.64 47.0 3.65e-01 100.0% 34.1%
1krlA00 6.20.50.130 Special › Other non-globular › N-terminal domain of TfIIb › 0.63 41.0 4.32e-01 83.0% 79.5%
4iupA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 57.0 5.12e-01 100.0% 77.8%
1atiB02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.63 53.0 4.28e-01 100.0% 92.9%
6l4lA02 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.63 45.0 3.43e-01 79.2% 95.6%
1x0tA02 6.20.50.20 Special › Other non-globular › N-terminal domain of TfIIb › 0.63 47.0 5.01e-01 81.1% 100.0%
2bz0A00 3.40.50.10990 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › GTP cyclohydrolase II 0.62 50.0 3.54e-01 90.6% 82.1%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.62 53.0 5.06e-01 100.0% 81.0%
4o38A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.62 53.0 4.38e-01 96.2% 93.8%
1tu1A00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.62 50.0 3.83e-01 98.1% 41.0%
5ygbA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 53.0 4.68e-01 100.0% 66.3%
1v2bB00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.61 49.0 3.64e-01 92.5% 96.0%
2rcfA00 2.40.50.220 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › EutN/Ccml 0.61 47.0 4.18e-01 88.7% 95.1%
1fvuB00 3.10.100.10 Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A 0.60 51.0 4.02e-01 100.0% 82.6%
4p78C00 3.30.920.30 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. 0.60 50.0 4.71e-01 94.3% 86.4%
1vw3B01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 49.0 4.07e-01 90.6% 51.6%
4fr4D01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.59 47.0 3.54e-01 86.8% 64.3%
5ajqA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.59 47.0 4.08e-01 90.6% 90.7%
2nmlA00 3.30.2260.10 Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary 0.59 43.0 3.54e-01 79.2% 93.0%
4bfmA00 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.58 47.0 2.98e-01 96.2% 42.5%
3dghA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 52.0 3.95e-01 100.0% 74.8%
1adjB02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.58 50.0 4.16e-01 98.1% 94.7%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.58 50.0 4.64e-01 100.0% 78.3%
2x7fC01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.57 45.0 3.84e-01 90.6% 91.5%
4hasA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.57 47.0 3.89e-01 96.2% 79.8%
1khiA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.57 49.0 4.44e-01 100.0% 77.3%
1viuC00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.57 40.0 2.84e-01 75.5% 69.5%
5fgoA00 3.10.450.700 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 46.0 4.45e-01 96.2% 79.0%
8ouzD01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 42.0 2.80e-01 81.1% 100.0%
4mz2A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 42.0 3.42e-01 83.0% 81.1%
3a7fA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.57 45.0 3.81e-01 90.6% 91.4%
3ml4C01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 45.0 3.63e-01 90.6% 45.4%
3i6uA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 47.0 4.04e-01 96.2% 95.4%
4fg9A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 45.0 3.99e-01 90.6% 93.7%
2f2uB01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 45.0 3.12e-01 88.7% 46.2%
1im3D00 2.60.40.1200 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 40.0 3.45e-01 81.1% 94.7%
6u7jA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 42.0 3.63e-01 84.9% 92.1%
3iwaA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.56 49.0 3.54e-01 100.0% 43.9%
2w4oA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 45.0 4.01e-01 90.6% 90.9%
3ke7B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 42.0 3.26e-01 86.8% 76.7%
4tm3A00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.56 44.0 2.74e-01 100.0% 35.7%
2weiA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.55 46.0 3.90e-01 94.3% 90.0%
5d9hA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.55 44.0 3.81e-01 90.6% 90.9%
4qdgA02 2.60.40.2090 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 43.0 3.38e-01 94.3% 79.3%
3atsA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.55 41.0 3.40e-01 88.7% 93.1%
1fl2A02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 49.0 3.77e-01 100.0% 71.0%
2xlpB01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 45.0 2.83e-01 100.0% 36.5%
5cqfA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 48.0 2.86e-01 100.0% 33.7%
3dm8A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 45.0 3.38e-01 94.3% 78.5%
6ncyA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 38.0 3.38e-01 81.1% 90.0%
3payB02 2.60.40.2090 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 43.0 3.38e-01 98.1% 75.8%
1sxjH01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.52 39.0 3.10e-01 84.9% 88.7%
4bfeC01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 37.0 3.11e-01 81.1% 81.1%
1hczA02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.52 43.0 4.17e-01 94.3% 93.2%
2hw6A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 43.0 3.68e-01 94.3% 90.9%
2qi2A01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.51 41.0 3.45e-01 100.0% 49.0%
3kxtA00 2.30.30.610 Mainly Beta › Roll › SH3 type barrels. › Chromatin protein Cren7 0.51 41.0 4.06e-01 90.6% 94.6%
2l33A00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.51 39.0 3.40e-01 90.6% 58.2%
4eqaC00 2.40.128.650 Mainly Beta › Beta Barrel › Lipocalin › 0.50 37.0 2.88e-01 88.7% 40.0%
ECOD (89)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4994957 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.91 71.0 7.06e-01 100.0% 80.0%
4946165 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.88 67.0 6.69e-01 100.0% 78.2%
5023740 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.86 63.0 6.49e-01 100.0% 82.0%
3987601 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.83 69.0 7.12e-01 96.2% 96.0%
4478971 4.1.1.174 ↗ beta barrels › SH3 › SH3 › SH3 › DUF951 0.81 70.0 6.45e-01 100.0% 75.4%
3821751 4.1.1.32 ↗ beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID 0.79 71.0 6.12e-01 100.0% 65.0%
3626927 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.79 60.0 5.97e-01 100.0% 80.0%
3510526 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 63.0 6.28e-01 100.0% 85.5%
3935202 220.1.1.161 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PF26659 0.73 51.0 3.87e-01 71.7% 31.7%
4519674 4.1.1.186 ↗ beta barrels › SH3 › SH3 › SH3 › DUF5397 0.73 60.0 5.91e-01 100.0% 86.2%
3620947 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.72 55.0 5.45e-01 83.0% 80.0%
4851967 4.1.1.32 ↗ beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID 0.72 63.0 5.99e-01 100.0% 87.1%
3485727 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.71 55.0 4.57e-01 84.9% 89.5%
1489902 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.71 55.0 4.39e-01 84.9% 82.1%
3937157 4.8.1.2 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow 0.71 60.0 5.46e-01 94.3% 84.3%
3317787 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.70 56.0 5.80e-01 90.6% 94.0%
5054994 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.70 52.0 5.45e-01 81.1% 95.8%
3894798 4.1.1.243 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_Myosin-XVIIIa 0.69 54.0 5.74e-01 94.3% 100.0%
5041400 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.69 51.0 5.42e-01 79.2% 100.0%
3215090 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.69 53.0 4.99e-01 84.9% 95.4%
3544618 4292.2.1.0 ↗ a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain 0.69 61.0 5.21e-01 100.0% 63.5%
4959991 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.69 54.0 4.97e-01 86.8% 65.7%
3774525 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.69 54.0 3.74e-01 86.8% 48.3%
3733718 4292.2.1.0 ↗ a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain 0.68 60.0 5.14e-01 100.0% 63.5%
3861070 4292.2.1.2 ↗ a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain › KIF1B 0.68 59.0 4.69e-01 100.0% 56.4%
None — 0.68 52.0 3.73e-01 86.8% 51.8%
4459163 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.68 57.0 4.33e-01 94.3% 44.8%
5002178 802.1.1.0 ↗ a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 0.67 49.0 5.00e-01 79.2% 82.0%
3212945 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.67 53.0 5.18e-01 98.1% 79.7%
3245735 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 58.0 4.56e-01 100.0% 51.3%
1112010 4.1.1.32 ↗ beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID 0.67 56.0 5.11e-01 98.1% 77.3%
4173773 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.67 56.0 4.82e-01 94.3% 66.7%
4976092 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 57.0 4.87e-01 100.0% 61.1%
4265586 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.66 55.0 4.24e-01 94.3% 44.8%
4930470 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.66 55.0 4.75e-01 94.3% 68.2%
4505786 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.66 55.0 4.21e-01 94.3% 44.7%
1933605 2.16.1.1 ↗ beta barrels › OB-fold › EutN/CcmL-like › EutN/CcmL-like › EutN_CcmL 0.65 51.0 4.42e-01 88.7% 89.5%
4514268 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.64 54.0 4.62e-01 96.2% 64.0%
3463266 4325.1.1.0 ↗ mixed a+b and a/b › YegP-like › YegP-like › YegP-like 0.64 48.0 4.64e-01 83.0% 90.0%
3902096 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.64 48.0 3.56e-01 84.9% 56.8%
3582834 4.1.1.319 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_Hsr9 0.64 57.0 4.71e-01 100.0% 58.9%
3964749 7580.1.1.1 ↗ a/b three-layered sandwiches › RibA-like › RibA-like › RibA-like › GTP_cyclohydro2 0.64 53.0 3.83e-01 94.3% 92.5%
3387114 2.4.1.0 ↗ beta barrels › OB-fold › MOP-like › MOP-like 0.64 53.0 4.43e-01 94.3% 58.9%
3734376 220.1.1.33 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_8 0.63 46.0 3.73e-01 94.3% 39.1%
3251857 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.63 50.0 3.87e-01 94.3% 51.1%
4946993 4.1.1.479 ↗ beta barrels › SH3 › SH3 › SH3 › eIF-5a 0.63 53.0 4.92e-01 100.0% 77.1%
3609256 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 56.0 4.76e-01 100.0% 68.2%
4966836 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.63 52.0 5.19e-01 100.0% 92.7%
3190369 2.1.1.2 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 0.63 50.0 3.98e-01 86.8% 44.8%
4306285 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 53.0 4.85e-01 100.0% 72.9%
3643549 4.1.1.139 ↗ beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.62 52.0 4.63e-01 98.1% 68.8%
4982336 7580.1.1.1 ↗ a/b three-layered sandwiches › RibA-like › RibA-like › RibA-like › GTP_cyclohydro2 0.62 50.0 3.44e-01 94.3% 71.9%
3927135 247.1.1.1 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B 0.62 52.0 3.21e-01 94.3% 30.3%
5061930 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 51.0 4.25e-01 92.5% 82.1%
3774301 316.1.1.64 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › TUTase, MTPAP-like_central 0.62 46.0 2.85e-01 81.1% 30.8%
3710675 375.1.1.7 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIS_C 0.62 46.0 4.76e-01 83.0% 91.7%
4941093 881.1.1.0 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.61 50.0 3.77e-01 98.1% 40.0%
4954224 4.1.1.182 ↗ beta barrels › SH3 › SH3 › SH3 › DUF2097 0.61 52.0 4.38e-01 100.0% 62.1%
3518287 4.1.1.347 ↗ beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5, KOW6_SPT5 0.61 53.0 4.18e-01 100.0% 49.6%
4998373 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.61 47.0 4.80e-01 86.8% 100.0%
3816742 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.61 53.0 3.27e-01 100.0% 33.2%
3279407 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.61 49.0 3.86e-01 88.7% 73.6%
4396772 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.61 44.0 3.34e-01 83.0% 59.3%
3190226 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.60 46.0 3.57e-01 83.0% 39.5%
3605539 708.1.2.3 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › Yippee-Mis18 0.60 45.0 3.74e-01 83.0% 75.0%
3440532 708.1.2.3 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › Yippee-Mis18 0.60 45.0 3.72e-01 84.9% 88.6%
5073192 211.1.1.0 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.60 45.0 4.27e-01 83.0% 78.5%
3451173 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 50.0 4.31e-01 100.0% 57.8%
4043920 7580.1.1.1 ↗ a/b three-layered sandwiches › RibA-like › RibA-like › RibA-like › GTP_cyclohydro2 0.59 50.0 3.52e-01 96.2% 69.1%
5013563 246.3.1.1 ↗ a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos 0.59 45.0 2.99e-01 83.0% 37.3%
3271234 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 43.0 4.56e-01 94.3% 97.8%
3602244 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.59 47.0 3.56e-01 92.5% 48.6%
4680459 375.1.1.67 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › NrdR-like_N 0.59 45.0 4.80e-01 86.8% 97.8%
3931161 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 50.0 4.01e-01 100.0% 50.4%
3739035 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.59 48.0 4.70e-01 94.3% 95.0%
4317534 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.59 49.0 3.23e-01 100.0% 35.2%
4998774 2004.1.1.198 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.58 51.0 2.98e-01 100.0% 22.0%
4973274 2.1.1.2 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 0.58 46.0 4.58e-01 94.3% 87.3%
4939931 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.57 44.0 3.26e-01 86.8% 56.7%
2795835 64.1.1.3 ↗ beta meanders › WW domain-like › WW domain › WW domain › MBD 0.57 41.0 4.18e-01 98.1% 84.0%
3701501 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.57 47.0 4.40e-01 92.5% 84.6%
4953347 375.1.1.299 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › CPxCG_zf 0.56 43.0 4.42e-01 81.1% 92.0%
3994218 2003.1.3.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain 0.56 45.0 2.99e-01 100.0% 75.7%
3606532 2484.6.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Periplasmic domain of ExbD/TolR › Periplasmic domain of ExbD/TolR 0.56 43.0 3.69e-01 86.8% 55.6%
4943539 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.55 39.0 4.13e-01 84.9% 100.0%
5067458 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 47.0 4.66e-01 94.3% 90.9%
5016920 2.4.1.0 ↗ beta barrels › OB-fold › MOP-like › MOP-like 0.54 46.0 4.12e-01 98.1% 75.6%
5061538 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.53 38.0 3.85e-01 84.9% 78.2%
4928567 2003.1.5.81 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.52 42.0 2.68e-01 96.2% 65.6%